BLASTX nr result

ID: Coptis25_contig00009961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009961
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271475.2| PREDICTED: uncharacterized protein LOC100249...   133   3e-29
ref|XP_002309084.1| predicted protein [Populus trichocarpa] gi|2...   128   1e-27
ref|NP_001234845.1| Prf interactor 30137 [Solanum lycopersicum] ...   120   2e-25
ref|XP_002533696.1| basic helix-loop-helix-containing protein, p...   119   5e-25
ref|XP_004137928.1| PREDICTED: uncharacterized protein LOC101203...   111   1e-22

>ref|XP_002271475.2| PREDICTED: uncharacterized protein LOC100249509 [Vitis vinifera]
           gi|297740322|emb|CBI30504.3| unnamed protein product
           [Vitis vinifera]
          Length = 720

 Score =  133 bits (335), Expect = 3e-29
 Identities = 70/122 (57%), Positives = 82/122 (67%)
 Frame = -1

Query: 700 ENGASWAVEMGSQLEVCPIVVKDLEQPGHMLIEXXXXXXXXXXXXXXXXXXXXXXXXXXX 521
           +NG SWA E+GS+L+VCPIVV+DLE PGHMLIE                           
Sbjct: 617 QNGTSWAFELGSELKVCPIVVEDLECPGHMLIEMLCN----------------------- 653

Query: 520 XENEVFLEIAQVIRRLELTIVKGVMENRVDKSWAHFIVEASTGFRRLDIFWPLMQLLQRN 341
            E+ +FLEIAQVIR LELTI+KGVME+R D  WAHFIVE S GF R+DIFWPLMQLLQ+N
Sbjct: 654 -EHGLFLEIAQVIRGLELTILKGVMESRSDNMWAHFIVEVSRGFHRMDIFWPLMQLLQQN 712

Query: 340 SS 335
            +
Sbjct: 713 QN 714


>ref|XP_002309084.1| predicted protein [Populus trichocarpa] gi|222855060|gb|EEE92607.1|
           predicted protein [Populus trichocarpa]
          Length = 708

 Score =  128 bits (321), Expect = 1e-27
 Identities = 70/136 (51%), Positives = 84/136 (61%), Gaps = 1/136 (0%)
 Frame = -1

Query: 739 DKKNLELFEDQGK-ENGASWAVEMGSQLEVCPIVVKDLEQPGHMLIEXXXXXXXXXXXXX 563
           D+KN  L E     ++G SWA E G+ L++CPIVV+DL  PGH+LIE             
Sbjct: 591 DRKNCRLSETNVNIQSGKSWAFEFGNDLQICPIVVEDLAYPGHLLIEMLCN--------- 641

Query: 562 XXXXXXXXXXXXXXXENEVFLEIAQVIRRLELTIVKGVMENRVDKSWAHFIVEASTGFRR 383
                          +  VFLEIAQVIR L+LTI+KGVME+R+  +WAHFIVEA  GF R
Sbjct: 642 ---------------DRGVFLEIAQVIRSLDLTILKGVMESRLSNTWAHFIVEACKGFHR 686

Query: 382 LDIFWPLMQLLQRNSS 335
           LDIFWPLMQLLQR  S
Sbjct: 687 LDIFWPLMQLLQRKRS 702


>ref|NP_001234845.1| Prf interactor 30137 [Solanum lycopersicum]
           gi|56157408|gb|AAV80420.1| Prf interactor 30137 [Solanum
           lycopersicum]
          Length = 740

 Score =  120 bits (302), Expect = 2e-25
 Identities = 67/125 (53%), Positives = 80/125 (64%), Gaps = 1/125 (0%)
 Frame = -1

Query: 700 ENGASWAVEMGSQLEVCPIVVKDLEQPGHMLIEXXXXXXXXXXXXXXXXXXXXXXXXXXX 521
           + G SWA+E+GS  ++CPI+VKDLE PGHMLIE                           
Sbjct: 637 QQGTSWALELGSVDQICPIIVKDLEYPGHMLIEMMCD----------------------- 673

Query: 520 XENEVFLEIAQVIRRLELTIVKGVMENRVDKSWAHFIVEASTGFRRLDIFWPLMQLLQR- 344
            ++  FLEI+ VI RLELTI+KGVME R + +WAHFIVEAS  F RLDIFWPLMQLLQ+ 
Sbjct: 674 -DHGRFLEISDVIHRLELTILKGVMEKRSESTWAHFIVEASGSFHRLDIFWPLMQLLQQV 732

Query: 343 NSSVS 329
            SSVS
Sbjct: 733 PSSVS 737


>ref|XP_002533696.1| basic helix-loop-helix-containing protein, putative [Ricinus
           communis] gi|223526407|gb|EEF28691.1| basic
           helix-loop-helix-containing protein, putative [Ricinus
           communis]
          Length = 740

 Score =  119 bits (299), Expect = 5e-25
 Identities = 62/123 (50%), Positives = 78/123 (63%)
 Frame = -1

Query: 712 DQGKENGASWAVEMGSQLEVCPIVVKDLEQPGHMLIEXXXXXXXXXXXXXXXXXXXXXXX 533
           ++  +NG SWA E+G++ +VCPI V+DL  PGHMLIE                       
Sbjct: 633 EENYQNGTSWAFELGNEFQVCPIAVEDLAYPGHMLIEMLCD------------------- 673

Query: 532 XXXXXENEVFLEIAQVIRRLELTIVKGVMENRVDKSWAHFIVEASTGFRRLDIFWPLMQL 353
                E+ +FLEIAQVIR L LTI+KGV+++R   +WA F+VEAS GF RLDIFWPLMQL
Sbjct: 674 -----EHGLFLEIAQVIRGLGLTILKGVLKSRSSNTWARFVVEASKGFHRLDIFWPLMQL 728

Query: 352 LQR 344
           LQR
Sbjct: 729 LQR 731


>ref|XP_004137928.1| PREDICTED: uncharacterized protein LOC101203710 [Cucumis sativus]
           gi|449524685|ref|XP_004169352.1| PREDICTED:
           uncharacterized LOC101203710 [Cucumis sativus]
          Length = 565

 Score =  111 bits (278), Expect = 1e-22
 Identities = 62/135 (45%), Positives = 82/135 (60%), Gaps = 3/135 (2%)
 Frame = -1

Query: 739 DKKNLELFEDQGKE-NGASW--AVEMGSQLEVCPIVVKDLEQPGHMLIEXXXXXXXXXXX 569
           D +N    E++G + NG SW  A ++GS+L+VCPIVV+DLE  GHMLI+           
Sbjct: 446 DSENCTDLENEGVQPNGTSWTWAFDIGSELQVCPIVVEDLEYQGHMLIKMLCN------- 498

Query: 568 XXXXXXXXXXXXXXXXXENEVFLEIAQVIRRLELTIVKGVMENRVDKSWAHFIVEASTGF 389
                            +  +FLEI Q+IR L+LTI+KGV+E   + SWA+FIVEA  GF
Sbjct: 499 -----------------DMGLFLEITQIIRNLDLTILKGVIERHSNNSWAYFIVEAPRGF 541

Query: 388 RRLDIFWPLMQLLQR 344
            R+D+FWPLM LLQR
Sbjct: 542 HRMDVFWPLMHLLQR 556


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