BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009953
         (1348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284829.1| PREDICTED: F-box protein SKIP28-like [Vitis ...   336   9e-90
ref|XP_002527773.1| conserved hypothetical protein [Ricinus comm...   309   9e-82
ref|XP_002315864.1| predicted protein [Populus trichocarpa] gi|2...   292   2e-76
gb|AFK41645.1| unknown [Lotus japonicus]                              289   1e-75
gb|AFK36453.1| unknown [Lotus japonicus]                              288   3e-75

>ref|XP_002284829.1| PREDICTED: F-box protein SKIP28-like [Vitis vinifera]
          Length = 338

 Score =  336 bits (861), Expect = 9e-90
 Identities = 150/292 (51%), Positives = 215/292 (73%), Gaps = 6/292 (2%)
 Frame = +2

Query: 275  VEPAQPHEALVLILSYLNLFELLRMNQVCKSLRDAIDSDILLWLDIVVEPPLNLRINDDN 454
            VE   PHEAL+L+L+YL LFELL M++VC+SLRDA+D D+L WLDI+VE PLN+  +D+ 
Sbjct: 40   VERGPPHEALLLVLAYLPLFELLNMSEVCRSLRDAVDKDVLQWLDIIVEKPLNMLFSDEI 99

Query: 455  LLKFTSKAQGRLRSLVLPSCVRITDDGLLRIIQNNPHINKLYIPSCSQLTPDGVVRAVKI 634
            ++K TSKA GRLR+L L SC +ITDDGL ++I+ NP IN+LY+P+C+ LTP+G++RAVK 
Sbjct: 100  MIKLTSKANGRLRTLALMSCTKITDDGLQQVIEKNPLINRLYLPACTGLTPEGIMRAVKT 159

Query: 635  LAKHNNKL-FLRLENIYNITKEHLQIIYSCLKLNPEEQNRQKSKLYLGYGH-----FQVQ 796
            L +H   L  +R+  +YN+ KEHL+ + S L++NP +   Q  +L   + H      +V+
Sbjct: 160  LTEHYQALKCVRINGVYNMKKEHLETLSSYLQMNPAKMEGQMQQLCFFHDHRNISVLRVE 219

Query: 797  NDLDPIDIEVCPKCKDVRLVFECPRESCRSKNKRPLAACKGCLLCIPRCEGCGGCVDLDD 976
                PID+E+CP+C +VR+VF+CPRE+C+ K +R +A C+GC  CIPRCE CG C+++ +
Sbjct: 220  ESYRPIDLEICPRCNEVRMVFDCPRETCKKKRERAMAECRGCYFCIPRCEECGKCIEV-E 278

Query: 977  EIGETVCLDLVCLECWLQLRKCNLCNKPYCNRHVDKIEWSRPDSYGFVCEVC 1132
            E GE VC D++C +CWLQL KCN CN+PYC+RH + ++ S   S GF+C +C
Sbjct: 279  EPGEVVCADVLCSDCWLQLPKCNFCNRPYCSRHAN-LQHSTSGSTGFICCIC 329


>ref|XP_002527773.1| conserved hypothetical protein [Ricinus communis]
            gi|223532808|gb|EEF34583.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 332

 Score =  309 bits (792), Expect = 9e-82
 Identities = 140/294 (47%), Positives = 211/294 (71%), Gaps = 4/294 (1%)
 Frame = +2

Query: 278  EPAQPHEALVLILSYLNLFELLRMNQVCKSLRDAIDSDILLWLDIVVEPPLNLRINDDNL 457
            EP  PHEAL L+L+YL +FELL M++VC SLRDA++ D+L WL I+V+ PL+ R++D+ L
Sbjct: 41   EPGPPHEALFLVLAYLPVFELLNMSEVCMSLRDAVNRDLLPWLTIIVDRPLSSRLSDEIL 100

Query: 458  LKFTSKAQGRLRSLVLPSCVRITDDGLLRIIQNNPHINKLYIPSCSQLTPDGVVRAVKIL 637
            +K  SKA  RLR+L+L +C +ITDDGL ++I+ NP+INKL++P+C+ LTP+G+++AVKIL
Sbjct: 101  MKIASKANCRLRTLILRNCTKITDDGLEKVIEKNPYINKLHLPACTGLTPEGIIKAVKIL 160

Query: 638  AKHNNKL-FLRLENIYNITKEHLQIIYSCLKLNPEEQNRQKSKLYLGYGHFQVQNDLDP- 811
            ++H N L  L++  IYN+ K+HL+ +YS L++NP  Q++ +  LY  Y         +  
Sbjct: 161  SQHPNSLKSLQINGIYNLKKQHLETLYSYLQMNP-SQHKPQHILYHIYRISPSSRSTESG 219

Query: 812  --IDIEVCPKCKDVRLVFECPRESCRSKNKRPLAACKGCLLCIPRCEGCGGCVDLDDEIG 985
              +D+++CP+C +V++VF+C RE+C  K  R +A C+GC  CI RCE CGGC+D +++  
Sbjct: 220  RIVDVDICPQCNEVQIVFDCSRETCMQKRDRLVADCRGCNFCISRCEECGGCIDAEEQ-E 278

Query: 986  ETVCLDLVCLECWLQLRKCNLCNKPYCNRHVDKIEWSRPDSYGFVCEVCSTETE 1147
            +  C D++C +CWL L KCN CNKPYC RH ++ ++S P   GF+CE C   +E
Sbjct: 279  DAACADILCSDCWLCLSKCNYCNKPYCKRHTNQ-QFSSPGFCGFICEACHMTSE 331


>ref|XP_002315864.1| predicted protein [Populus trichocarpa] gi|222864904|gb|EEF02035.1|
            predicted protein [Populus trichocarpa]
          Length = 306

 Score =  292 bits (747), Expect = 2e-76
 Identities = 137/293 (46%), Positives = 199/293 (67%), Gaps = 1/293 (0%)
 Frame = +2

Query: 275  VEPAQPHEALVLILSYLNLFELLRMNQVCKSLRDAIDSDILLWLDIVVEPPLNLRINDDN 454
            VEP  PHEAL  +L+YL++F+LL M++VC  LRDA+  D+L W DI++E PLN R++D+ 
Sbjct: 25   VEPGPPHEALFFVLAYLDVFDLLVMSEVCMPLRDAVSKDVLPWRDIIIERPLNSRLSDEI 84

Query: 455  LLKFTSKAQGRLRSLVLPSCVRITDDGLLRIIQNNPHINKLYIPSCSQLTPDGVVRAVKI 634
            L++ TSKA GRLR+L L +C +ITDDGL  +I+ N  I+KL++P CS LTP+G++R VK 
Sbjct: 85   LVQITSKAHGRLRTLALINCFKITDDGLQTVIEKNHLISKLHVPGCSGLTPEGIIRTVKT 144

Query: 635  LAKHNNKL-FLRLENIYNITKEHLQIIYSCLKLNPEEQNRQKSKLYLGYGHFQVQNDLDP 811
            L++H+N L  L++  I+N+ KEHL+ I S L++NP  Q  Q                L  
Sbjct: 145  LSQHHNSLESLQINGIHNLKKEHLETISSHLQMNPPHQKPQPI--------------LRM 190

Query: 812  IDIEVCPKCKDVRLVFECPRESCRSKNKRPLAACKGCLLCIPRCEGCGGCVDLDDEIGET 991
            ID+++CPKC +VR VF+CPR + +S  +     C+GC  CI RCE CG CVD D+E+ ET
Sbjct: 191  IDVDICPKCNEVRTVFDCPRATSKSGREHSFTHCRGCYFCISRCEECGQCVD-DEELEET 249

Query: 992  VCLDLVCLECWLQLRKCNLCNKPYCNRHVDKIEWSRPDSYGFVCEVCSTETES 1150
            +C  ++C +CWL L KC  CN+ YC +H ++   S PDS GF+C++C+ + E+
Sbjct: 250  LCFGILCTDCWLLLPKCCFCNQAYCKQHENQ-RCSLPDSTGFLCDLCNEKLET 301


>gb|AFK41645.1| unknown [Lotus japonicus]
          Length = 322

 Score =  289 bits (740), Expect = 1e-75
 Identities = 141/296 (47%), Positives = 199/296 (67%), Gaps = 6/296 (2%)
 Frame = +2

Query: 263  GEELVEPAQPHEALVLILSYLNLFELLRMNQVCKSLRDAIDSDILLWLDIVVEPPLNLRI 442
            G+   E   PHEAL L+L+YL ++++L M+QVCK+LRDA+++D+L WL+++VE PL+ R+
Sbjct: 18   GQAQTEQEPPHEALFLVLTYLPVYQVLAMSQVCKALRDAVNNDVLPWLNVIVERPLSSRL 77

Query: 443  NDDNLLKFTSKAQGRLRSLVLPSCVRITDDGLLRIIQNNPHINKLYIPSCSQLTPDGVVR 622
            +D+ L+K TSKA GRL++L L +C  ITD GL R+++ NP  NKL+IP+C+ +T +GV R
Sbjct: 78   SDEILVKITSKANGRLKTLALMNCTHITDKGLQRVVEQNPLTNKLHIPACTGITAEGVTR 137

Query: 623  AVKILAKHNNKL-FLRLENIYNITKEHLQIIYSCLKLNP--EEQNRQKSKLYLGYGHFQV 793
            AV+ L + +N L  LR+  IYN+ KEHL ++   L+ N   EEQ  QK   Y   G F V
Sbjct: 138  AVQTLCQRSNCLSTLRINGIYNLQKEHLDMLAMNLRKNVPLEEQQMQKPNYYHKRGSFTV 197

Query: 794  ---QNDLDPIDIEVCPKCKDVRLVFECPRESCRSKNKRPLAACKGCLLCIPRCEGCGGCV 964
               + +   ID+E CPKC +V +V++CP+  C  K ++P   C+GC  CIPRCE CGGCV
Sbjct: 198  FSREENQRIIDLETCPKCFEVTMVYDCPKVEC-MKREKPQVQCRGCKFCIPRCENCGGCV 256

Query: 965  DLDDEIGETVCLDLVCLECWLQLRKCNLCNKPYCNRHVDKIEWSRPDSYGFVCEVC 1132
              ++E  E  C D++CLECWLQL KCN CNKPYC +H +   W       F+C VC
Sbjct: 257  GSEEE-EEAACADILCLECWLQLPKCNFCNKPYCKQHEN--WWCSSLDPIFLCRVC 309


>gb|AFK36453.1| unknown [Lotus japonicus]
          Length = 299

 Score =  288 bits (736), Expect = 3e-75
 Identities = 137/277 (49%), Positives = 193/277 (69%), Gaps = 6/277 (2%)
 Frame = +2

Query: 263  GEELVEPAQPHEALVLILSYLNLFELLRMNQVCKSLRDAIDSDILLWLDIVVEPPLNLRI 442
            G+   E   PHEAL L+L+YL ++++L M+QVCK+LRDA+++D+L WL+++VE PL+ R+
Sbjct: 18   GQAQTEQEPPHEALFLVLTYLPVYQVLAMSQVCKALRDAVNNDVLPWLNVIVERPLSSRL 77

Query: 443  NDDNLLKFTSKAQGRLRSLVLPSCVRITDDGLLRIIQNNPHINKLYIPSCSQLTPDGVVR 622
            +D+ L+K TSKA GRL++L L +C  ITD GL R+++ NP INKL+IP+C+ +T +GV R
Sbjct: 78   SDEILVKITSKANGRLKTLALMNCTHITDKGLQRVVEQNPLINKLHIPACTGITAEGVTR 137

Query: 623  AVKILAKHNNKL-FLRLENIYNITKEHLQIIYSCLKLNP--EEQNRQKSKLYLGYGHFQV 793
            AV+ L + +N L  LR+  IYN+ KEHL ++   L+ N   EEQ  QK   Y   G F V
Sbjct: 138  AVQTLCQRSNCLSTLRINGIYNLQKEHLDMLAMNLRKNVPLEEQQMQKPNYYHKRGSFTV 197

Query: 794  ---QNDLDPIDIEVCPKCKDVRLVFECPRESCRSKNKRPLAACKGCLLCIPRCEGCGGCV 964
               + +   ID+E CPKC +V +V++CP+  C  K ++P   C+GC  CIPRCE CGGCV
Sbjct: 198  FSREENQRIIDLETCPKCFEVTMVYDCPKVEC-MKREKPQVQCRGCKFCIPRCENCGGCV 256

Query: 965  DLDDEIGETVCLDLVCLECWLQLRKCNLCNKPYCNRH 1075
              ++E  E  C D++CLECWLQL KCN CNKPYC +H
Sbjct: 257  GSEEE-EEAACADILCLECWLQLPKCNFCNKPYCKQH 292