BLASTX nr result

ID: Coptis25_contig00009947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009947
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511601.1| ubiquitin-protein ligase, putative [Ricinus ...   106   2e-21
ref|XP_003552500.1| PREDICTED: protein ARABIDILLO 1-like [Glycin...   105   3e-21
ref|XP_003534470.1| PREDICTED: protein ARABIDILLO 1-like [Glycin...   105   3e-21
ref|NP_566029.1| protein ARABIDILLO 1 [Arabidopsis thaliana] gi|...   102   3e-20
ref|XP_002881988.1| armadillo/beta-catenin repeat family protein...   101   7e-20

>ref|XP_002511601.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223548781|gb|EEF50270.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 920

 Score =  106 bits (264), Expect = 2e-21
 Identities = 53/81 (65%), Positives = 62/81 (76%), Gaps = 3/81 (3%)
 Frame = -1

Query: 238 TDANLLVMAARHEKLESF*LGPEFCQRISSDAIKMVGLCCP---KLRFSGVMDVGEDAIN 68
           TDA+L V+ ARHE LES  LGP+FC+RISSDAIK +  CCP   KLR SG+ DV  DAIN
Sbjct: 139 TDASLSVIVARHELLESLQLGPDFCERISSDAIKAIAFCCPKLKKLRVSGIRDVSADAIN 198

Query: 67  ALAKNCKQLEEICFMDCLNVD 5
           ALAK+C  L +I F+DCLNVD
Sbjct: 199 ALAKHCPNLIDIGFLDCLNVD 219


>ref|XP_003552500.1| PREDICTED: protein ARABIDILLO 1-like [Glycine max]
          Length = 921

 Score =  105 bits (263), Expect = 3e-21
 Identities = 53/81 (65%), Positives = 62/81 (76%), Gaps = 3/81 (3%)
 Frame = -1

Query: 238 TDANLLVMAARHEKLESF*LGPEFCQRISSDAIKMVGLCCP---KLRFSGVMDVGEDAIN 68
           TDA L V+ ARHE LES  LGP+FC+RISSDAIK +  CCP   KLR SG+ DV  DAIN
Sbjct: 141 TDATLSVIVARHEFLESLQLGPDFCERISSDAIKAIAHCCPKLNKLRLSGIRDVNADAIN 200

Query: 67  ALAKNCKQLEEICFMDCLNVD 5
           ALAK+C +L +I F+DCLNVD
Sbjct: 201 ALAKHCSKLTDIGFIDCLNVD 221


>ref|XP_003534470.1| PREDICTED: protein ARABIDILLO 1-like [Glycine max]
          Length = 921

 Score =  105 bits (263), Expect = 3e-21
 Identities = 53/81 (65%), Positives = 62/81 (76%), Gaps = 3/81 (3%)
 Frame = -1

Query: 238 TDANLLVMAARHEKLESF*LGPEFCQRISSDAIKMVGLCCP---KLRFSGVMDVGEDAIN 68
           TDA L V+ ARHE LES  LGP+FC+RISSDAIK +  CCP   KLR SG+ DV  DAIN
Sbjct: 141 TDATLSVIVARHELLESLQLGPDFCERISSDAIKAIAHCCPKLNKLRLSGIRDVNADAIN 200

Query: 67  ALAKNCKQLEEICFMDCLNVD 5
           ALAK+C +L +I F+DCLNVD
Sbjct: 201 ALAKHCPKLTDIGFIDCLNVD 221


>ref|NP_566029.1| protein ARABIDILLO 1 [Arabidopsis thaliana]
           gi|75219086|sp|O22161.1|ADLO1_ARATH RecName:
           Full=Protein ARABIDILLO 1; AltName: Full=F-box only
           protein 5 gi|2344894|gb|AAC31834.1| F-box protein
           family, AtFBX5 [Arabidopsis thaliana]
           gi|330255388|gb|AEC10482.1| protein ARABIDILLO 1
           [Arabidopsis thaliana]
          Length = 930

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/81 (60%), Positives = 61/81 (75%), Gaps = 3/81 (3%)
 Frame = -1

Query: 238 TDANLLVMAARHEKLESF*LGPEFCQRISSDAIKMVGLCCP---KLRFSGVMDVGEDAIN 68
           TDA L ++ ARHE LES  LGP+FC+RI+SDAIK V  CCP   KLR SG+ DV  +AI 
Sbjct: 146 TDATLSMIVARHEALESLQLGPDFCERITSDAIKAVAFCCPKLKKLRLSGIRDVTSEAIE 205

Query: 67  ALAKNCKQLEEICFMDCLNVD 5
           ALAK+C QL ++ F+DCLN+D
Sbjct: 206 ALAKHCPQLNDLGFLDCLNID 226


>ref|XP_002881988.1| armadillo/beta-catenin repeat family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327827|gb|EFH58247.1|
           armadillo/beta-catenin repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 929

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/81 (59%), Positives = 61/81 (75%), Gaps = 3/81 (3%)
 Frame = -1

Query: 238 TDANLLVMAARHEKLESF*LGPEFCQRISSDAIKMVGLCCP---KLRFSGVMDVGEDAIN 68
           TDA L ++ ARHE LES  LGP+FC++I+SDAIK V  CCP   KLR SG+ DV  +AI 
Sbjct: 145 TDATLSMIVARHEALESLQLGPDFCEKITSDAIKAVAFCCPKLTKLRLSGIRDVTSEAIE 204

Query: 67  ALAKNCKQLEEICFMDCLNVD 5
           ALAK+C QL ++ F+DCLN+D
Sbjct: 205 ALAKHCPQLSDLGFLDCLNID 225


Top