BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009945
         (1820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta ch...   756   0.0  
ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2,...   754   0.0  
ref|XP_004142558.1| PREDICTED: tryptophan synthase beta chain 2,...   753   0.0  
ref|XP_003519001.1| PREDICTED: tryptophan synthase beta chain 2,...   750   0.0  
dbj|BAD83779.1| tryptophan synthase beta subunit [Polygonum tinc...   750   0.0  

>sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta chain 2, chloroplastic; Flags:
            Precursor gi|2792520|gb|AAB97087.1| tryptophan synthase
            beta subunit [Camptotheca acuminata]
            gi|2801771|gb|AAB97526.1| tryptophan synthase beta
            [Camptotheca acuminata]
          Length = 466

 Score =  756 bits (1953), Expect = 0.0
 Identities = 370/410 (90%), Positives = 391/410 (95%)
 Frame = +1

Query: 352  QIEVNEKNTNSTILQRPDSFGRFGKFGGKYVPETLMHALTELESAFRLLASDEAFQKELD 531
            ++E         +LQRPDSFGRFGKFGGKYVPETLM+ALTELESAFR L+ D+ FQKELD
Sbjct: 55   EMEKERSEREPDVLQRPDSFGRFGKFGGKYVPETLMYALTELESAFRSLSGDQVFQKELD 114

Query: 532  GILKDYVGRETPLYFAERLTEHYKGPSGEGPDIYLKREDLNHTGAHKINNAVAQALLAKR 711
            GILKDYVGRE+PLYFAERLT HYK P+GEGP+IYLKREDLNHTGAHKINNAVAQALLAKR
Sbjct: 115  GILKDYVGRESPLYFAERLTLHYKRPNGEGPEIYLKREDLNHTGAHKINNAVAQALLAKR 174

Query: 712  LGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQSLNVFRMRLLGAEVRAVH 891
            LGKKRIIAETGAGQHGVATATVCARFGL+C+IYMGAQDMERQ+LNVFRMRLLGAEVRAVH
Sbjct: 175  LGKKRIIAETGAGQHGVATATVCARFGLQCVIYMGAQDMERQALNVFRMRLLGAEVRAVH 234

Query: 892  SGTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQAIEKW 1071
            SGTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQA+EKW
Sbjct: 235  SGTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKW 294

Query: 1072 GGKPDVLVACVGGGSNAMGLFHEFVDDSDVRLIGVEAAGHGVDSGRHAATLTKGEVGVLH 1251
            GGKPDVLVACVGGGSNAMGLFHEFVDD DVR+IGVEAAG G+DSG+HAATLTKGEVGVLH
Sbjct: 295  GGKPDVLVACVGGGSNAMGLFHEFVDDKDVRMIGVEAAGFGLDSGKHAATLTKGEVGVLH 354

Query: 1252 GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDIGRAEYYSITDDEALEAFKRLS 1431
            GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHS+LKDIGRAEYY  TD+EALEAFKRLS
Sbjct: 355  GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDIGRAEYYCCTDEEALEAFKRLS 414

Query: 1432 QLEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVQTAIKYL 1581
            +LEGIIPALETSHALA+LEKLCPTLPNGTKVVLNCSGRGDKDV TAIK+L
Sbjct: 415  RLEGIIPALETSHALAFLEKLCPTLPNGTKVVLNCSGRGDKDVHTAIKHL 464


>ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
            [Cucumis sativus]
          Length = 472

 Score =  754 bits (1946), Expect = 0.0
 Identities = 370/421 (87%), Positives = 401/421 (95%)
 Frame = +1

Query: 319  CTLTTKVASPLQIEVNEKNTNSTILQRPDSFGRFGKFGGKYVPETLMHALTELESAFRLL 498
            CTLT + +  ++ +V++    S++ QRPDSFGRFG+FGGKYVPETLMHALTELE+AF  L
Sbjct: 54   CTLTREPSLAMEDKVHD----SSLQQRPDSFGRFGRFGGKYVPETLMHALTELETAFYSL 109

Query: 499  ASDEAFQKELDGILKDYVGRETPLYFAERLTEHYKGPSGEGPDIYLKREDLNHTGAHKIN 678
            A D+ FQKELDGIL+DYVGRE+PLYFAERLTEHY+  +GEGP I+LKREDLNHTGAHKIN
Sbjct: 110  AGDQDFQKELDGILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKIN 169

Query: 679  NAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQSLNVFRM 858
            NAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQ+LNVFRM
Sbjct: 170  NAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRM 229

Query: 859  RLLGAEVRAVHSGTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIG 1038
            +LLGAEVR VHSGTATLKDATSEAIRDWVTNVE+THYILGSVAGPHPYPMMVR+FHAVIG
Sbjct: 230  QLLGAEVRPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIG 289

Query: 1039 KETRKQAIEKWGGKPDVLVACVGGGSNAMGLFHEFVDDSDVRLIGVEAAGHGVDSGRHAA 1218
            KETRKQA+EKWGGKPDVLVACVGGGSNAMGLFHEFV+D DVRL+GVEAAG G+DSG+HAA
Sbjct: 290  KETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAA 349

Query: 1219 TLTKGEVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDIGRAEYYSITD 1398
            TLTKGEVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKD+GRAEY+S+TD
Sbjct: 350  TLTKGEVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTD 409

Query: 1399 DEALEAFKRLSQLEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVQTAIKY 1578
            DEALEAFKRLS+LEGIIPALETSHALAYLEKLCPTLP+GTKVVLNCSGRGDKDVQTAIKY
Sbjct: 410  DEALEAFKRLSRLEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKY 469

Query: 1579 L 1581
            L
Sbjct: 470  L 470


>ref|XP_004142558.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
            [Cucumis sativus]
          Length = 472

 Score =  753 bits (1943), Expect = 0.0
 Identities = 369/421 (87%), Positives = 401/421 (95%)
 Frame = +1

Query: 319  CTLTTKVASPLQIEVNEKNTNSTILQRPDSFGRFGKFGGKYVPETLMHALTELESAFRLL 498
            CTLT + +  ++ +V++    S++ QRPDSFGRFG+FGGKYVPETLMHALTELE+AF  L
Sbjct: 54   CTLTREPSLAMEDKVHD----SSLQQRPDSFGRFGRFGGKYVPETLMHALTELETAFYSL 109

Query: 499  ASDEAFQKELDGILKDYVGRETPLYFAERLTEHYKGPSGEGPDIYLKREDLNHTGAHKIN 678
            A D+ FQKELDGIL+DYVGRE+PLYFAERLTEHY+  +GEGP I+LKREDLNHTGAHKIN
Sbjct: 110  AGDQDFQKELDGILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKIN 169

Query: 679  NAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQSLNVFRM 858
            NAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQ+LNVFRM
Sbjct: 170  NAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRM 229

Query: 859  RLLGAEVRAVHSGTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIG 1038
            +LLGAEVR VHSGTATLKDATSEAIRDWVTNVE+THYILGSVAGPHPYPMMVR+FHAVIG
Sbjct: 230  QLLGAEVRPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIG 289

Query: 1039 KETRKQAIEKWGGKPDVLVACVGGGSNAMGLFHEFVDDSDVRLIGVEAAGHGVDSGRHAA 1218
            KETRKQA+EKWGGKPDVLVACVGGGSNAMGLFHEFV+D DVRL+GVEAAG G+DSG+HAA
Sbjct: 290  KETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAA 349

Query: 1219 TLTKGEVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDIGRAEYYSITD 1398
            TLTKGEVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKD+GRAEY+S+TD
Sbjct: 350  TLTKGEVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTD 409

Query: 1399 DEALEAFKRLSQLEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVQTAIKY 1578
            DEALEAFKRL++LEGIIPALETSHALAYLEKLCPTLP+GTKVVLNCSGRGDKDVQTAIKY
Sbjct: 410  DEALEAFKRLARLEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKY 469

Query: 1579 L 1581
            L
Sbjct: 470  L 470


>ref|XP_003519001.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
            [Glycine max]
          Length = 479

 Score =  750 bits (1937), Expect = 0.0
 Identities = 371/422 (87%), Positives = 398/422 (94%), Gaps = 1/422 (0%)
 Frame = +1

Query: 319  CTLTTKVASPLQIEVNEKNTN-STILQRPDSFGRFGKFGGKYVPETLMHALTELESAFRL 495
            C+LT    S + +E + K  N S +LQRPDSFGRFGKFGGKYVPETLMHALTELE+AF  
Sbjct: 56   CSLTKDPYSVVPLEEHSKMDNGSVLLQRPDSFGRFGKFGGKYVPETLMHALTELEAAFYS 115

Query: 496  LASDEAFQKELDGILKDYVGRETPLYFAERLTEHYKGPSGEGPDIYLKREDLNHTGAHKI 675
            L++DE FQKEL GILKDYVGRE+PLYFAERLTEHYK P+GEGP IYLKREDLNHTGAHKI
Sbjct: 116  LSADEEFQKELAGILKDYVGRESPLYFAERLTEHYKRPNGEGPHIYLKREDLNHTGAHKI 175

Query: 676  NNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQSLNVFR 855
            NNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQ+LNVFR
Sbjct: 176  NNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFR 235

Query: 856  MRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVI 1035
            MRLLGAEVR VHSGTATLKDATSEAIRDWVTNVE+THYILGSVAGPHPYPMMVREFHAVI
Sbjct: 236  MRLLGAEVRPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVI 295

Query: 1036 GKETRKQAIEKWGGKPDVLVACVGGGSNAMGLFHEFVDDSDVRLIGVEAAGHGVDSGRHA 1215
            GKETRKQA+EKWGGKPD+L+ACVGGGSNAMGLF+EFVDD DVRLIGVEAAG G+DSG+HA
Sbjct: 296  GKETRKQALEKWGGKPDILIACVGGGSNAMGLFNEFVDDKDVRLIGVEAAGFGLDSGKHA 355

Query: 1216 ATLTKGEVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDIGRAEYYSIT 1395
            ATLTKGEVGVLHGAMSYLLQDDDGQI+EPHSISAGLDYPGVGPEHS+LKD+GRAEY+SIT
Sbjct: 356  ATLTKGEVGVLHGAMSYLLQDDDGQIVEPHSISAGLDYPGVGPEHSFLKDLGRAEYHSIT 415

Query: 1396 DDEALEAFKRLSQLEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVQTAIK 1575
            D+EALEAFKR+S+LEGIIPALETSHALAYLEK+CPTLPNG KVV+N SGRGDKDVQTAIK
Sbjct: 416  DEEALEAFKRVSRLEGIIPALETSHALAYLEKVCPTLPNGAKVVVNFSGRGDKDVQTAIK 475

Query: 1576 YL 1581
             L
Sbjct: 476  CL 477


>dbj|BAD83779.1| tryptophan synthase beta subunit [Polygonum tinctorium]
          Length = 474

 Score =  750 bits (1937), Expect = 0.0
 Identities = 368/421 (87%), Positives = 392/421 (93%)
 Frame = +1

Query: 319  CTLTTKVASPLQIEVNEKNTNSTILQRPDSFGRFGKFGGKYVPETLMHALTELESAFRLL 498
            C +T +      ++ +  +    +LQRPDSFGRFGKFGGKYVPETLMHAL ELE+AF  L
Sbjct: 52   CVMTREDLGAKSLKADAADQEPLLLQRPDSFGRFGKFGGKYVPETLMHALDELETAFHSL 111

Query: 499  ASDEAFQKELDGILKDYVGRETPLYFAERLTEHYKGPSGEGPDIYLKREDLNHTGAHKIN 678
            A+D  FQKELDGILKDYVGRETPLYFAERLTEHYK P+GEGP IYLKREDLNHTGAHKIN
Sbjct: 112  ATDVEFQKELDGILKDYVGRETPLYFAERLTEHYKRPNGEGPQIYLKREDLNHTGAHKIN 171

Query: 679  NAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQSLNVFRM 858
            NAVAQALLAKRLGK RIIAETGAGQHGVATATVCARFGLECI+YMGAQDMERQSLNVFRM
Sbjct: 172  NAVAQALLAKRLGKTRIIAETGAGQHGVATATVCARFGLECIVYMGAQDMERQSLNVFRM 231

Query: 859  RLLGAEVRAVHSGTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIG 1038
            RLLGAEVR VHSGTATLKDATSEAIRDWVTNVE+THYILGSVAGPHPYPMMVREFHAVIG
Sbjct: 232  RLLGAEVRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIG 291

Query: 1039 KETRKQAIEKWGGKPDVLVACVGGGSNAMGLFHEFVDDSDVRLIGVEAAGHGVDSGRHAA 1218
            KETRKQA+EKWGGKPDVLVACVGGGSNAMGLFHEFVDD DVRLIGVEAAG G+DSG+HAA
Sbjct: 292  KETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEFVDDKDVRLIGVEAAGFGLDSGKHAA 351

Query: 1219 TLTKGEVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDIGRAEYYSITD 1398
            TLTKGEVGVLHGAMSYLLQDDDGQ+IEPHSISAGLDYPGVGPEHS+LKD+ RAEYYSITD
Sbjct: 352  TLTKGEVGVLHGAMSYLLQDDDGQVIEPHSISAGLDYPGVGPEHSFLKDMKRAEYYSITD 411

Query: 1399 DEALEAFKRLSQLEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVQTAIKY 1578
            +EALEAF+RLS+LEGIIPALETSHALAYLEKLCPTL +GT+VVLNCSGRGDKDV TAIK+
Sbjct: 412  EEALEAFRRLSRLEGIIPALETSHALAYLEKLCPTLADGTRVVLNCSGRGDKDVHTAIKH 471

Query: 1579 L 1581
            L
Sbjct: 472  L 472