BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009934
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   132   4e-29
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...   132   4e-29
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   124   2e-26
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           123   4e-26
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   123   4e-26

>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score =  132 bits (333), Expect = 4e-29
 Identities = 68/147 (46%), Positives = 97/147 (65%), Gaps = 2/147 (1%)
 Frame = -2

Query: 435 SSLVLL--ISTSPHLQCSPLIACTNVIYKCVAKLLAQRLQPFMDKLIAPSQSAFIPGRSI 262
           ++LVL+  I+ S  +     I+C N +YK +AKLL  RL+  ++++I+PSQSAF+PGR +
Sbjct: 507 TTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLL 566

Query: 261 QENILFAHEIL*SYTRKHGSARCAIKVDLQKTYDYVAWPTIIHMMDALSFPARFKGWIIS 82
            EN+L A EI+  Y  K+ S+R  +KVDL+K +D V W  II    AL+ P +F  WI  
Sbjct: 567 SENVLLATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQ 626

Query: 81  CFTSPYFSIMVNGAPHGFFSGKKGLIQ 1
           C ++PYFS+MVNG+  GFF   KGL Q
Sbjct: 627 CISTPYFSVMVNGSSSGFFKSNKGLRQ 653


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score =  132 bits (333), Expect = 4e-29
 Identities = 68/147 (46%), Positives = 97/147 (65%), Gaps = 2/147 (1%)
 Frame = -2

Query: 435 SSLVLL--ISTSPHLQCSPLIACTNVIYKCVAKLLAQRLQPFMDKLIAPSQSAFIPGRSI 262
           ++LVL+  I+ S  +     I+C N +YK +AKLL  RL+  ++++I+PSQSAF+PGR +
Sbjct: 507 TTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLL 566

Query: 261 QENILFAHEIL*SYTRKHGSARCAIKVDLQKTYDYVAWPTIIHMMDALSFPARFKGWIIS 82
            EN+L A EI+  Y  K+ S+R  +KVDL+K +D V W  II    AL+ P +F  WI  
Sbjct: 567 SENVLLATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQ 626

Query: 81  CFTSPYFSIMVNGAPHGFFSGKKGLIQ 1
           C ++PYFS+MVNG+  GFF   KGL Q
Sbjct: 627 CISTPYFSVMVNGSSSGFFKSNKGLRQ 653


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  124 bits (310), Expect = 2e-26
 Identities = 57/127 (44%), Positives = 84/127 (66%)
 Frame = -2

Query: 381 IACTNVIYKCVAKLLAQRLQPFMDKLIAPSQSAFIPGRSIQENILFAHEIL*SYTRKHGS 202
           IAC  VIYK ++K+L  R++  + +++  +QS FIPGR I +NIL A E++  YTRKH S
Sbjct: 517 IACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMS 576

Query: 201 ARCAIKVDLQKTYDYVAWPTIIHMMDALSFPARFKGWIISCFTSPYFSIMVNGAPHGFFS 22
            RC +KVD++K YD V W  +  ++    FP+RF GWI+ C ++  +S++VNG P   F 
Sbjct: 577 PRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQ 636

Query: 21  GKKGLIQ 1
            +KGL Q
Sbjct: 637 ARKGLRQ 643


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  123 bits (308), Expect = 4e-26
 Identities = 66/147 (44%), Positives = 90/147 (61%), Gaps = 2/147 (1%)
 Frame = -2

Query: 435 SSLVLLISTSPHLQCSPL--IACTNVIYKCVAKLLAQRLQPFMDKLIAPSQSAFIPGRSI 262
           ++LVL+  TS     S    I+C N +YK ++KLL  RLQ  +  +I  SQSAF+PGRS+
Sbjct: 366 TTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSL 425

Query: 261 QENILFAHEIL*SYTRKHGSARCAIKVDLQKTYDYVAWPTIIHMMDALSFPARFKGWIIS 82
            EN+L A E++  Y R + S R  +KVDL+K +D V W  +   + AL+ P R+  WI  
Sbjct: 426 AENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQ 485

Query: 81  CFTSPYFSIMVNGAPHGFFSGKKGLIQ 1
           C T+P F+I VNGA  GFF   KGL Q
Sbjct: 486 CITTPSFTISVNGATGGFFRSTKGLRQ 512


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score =  123 bits (308), Expect = 4e-26
 Identities = 66/147 (44%), Positives = 90/147 (61%), Gaps = 2/147 (1%)
 Frame = -2

Query: 435 SSLVLLISTSPHLQCSPL--IACTNVIYKCVAKLLAQRLQPFMDKLIAPSQSAFIPGRSI 262
           ++LVL+  TS     S    I+C N +YK ++KLL  RLQ  +  +I  SQSAF+PGRS+
Sbjct: 366 TTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSL 425

Query: 261 QENILFAHEIL*SYTRKHGSARCAIKVDLQKTYDYVAWPTIIHMMDALSFPARFKGWIIS 82
            EN+L A E++  Y R + S R  +KVDL+K +D V W  +   + AL+ P R+  WI  
Sbjct: 426 AENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQ 485

Query: 81  CFTSPYFSIMVNGAPHGFFSGKKGLIQ 1
           C T+P F+I VNGA  GFF   KGL Q
Sbjct: 486 CITTPSFTISVNGATGGFFRSTKGLRQ 512