BLASTX nr result

ID: Coptis25_contig00009924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009924
         (1110 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25045.3| unnamed protein product [Vitis vinifera]              232   1e-58
ref|XP_002274710.2| PREDICTED: uncharacterized protein LOC100247...   226   1e-56
ref|XP_002520945.1| Hypoxia-inducible factor 1 alpha inhibitor, ...   177   3e-42
ref|XP_003590573.1| JmjC domain-containing protein D [Medicago t...   173   8e-41
ref|XP_002307610.1| predicted protein [Populus trichocarpa] gi|2...   172   1e-40

>emb|CBI25045.3| unnamed protein product [Vitis vinifera]
          Length = 219

 Score =  232 bits (591), Expect = 1e-58
 Identities = 124/214 (57%), Positives = 150/214 (70%)
 Frame = +2

Query: 35  EKSEKHVGKKLAVGEIGYQEFDSVDQNGTKVTKAANQKEKIMLDQLKPSALQALHELVSL 214
           EK EKH  +    GE    E D      +K  K +  K++IML +++P ALQALH+LV+L
Sbjct: 2   EKMEKHSCELPNNGESDNHESDLDQTCASKDLKGSKLKQRIMLHEVEPLALQALHKLVAL 61

Query: 215 VHDSVNVNVKIQPVXXXXXXXXXXXXXXXXKKIASVNLFLLEDDPVADIVWTLKPLELQN 394
           VHDSV V  + +PV                K+I + +LF LEDDP+A I+WTL+PL LQN
Sbjct: 62  VHDSVKVADRTEPVHSTSGNDSDVKVKSEQKRIVASDLFHLEDDPLAKILWTLEPLTLQN 121

Query: 395 VLLAMVYNFPRTLETLILHVLSPVGAEVLTRKFXXXXXXXXXXXRNEFYQIFYGVFDDQF 574
           V LAMV+NFPRTLE LIL++LSPVGAEVLTRKF           RNEFYQ+FYGVFDDQF
Sbjct: 122 VFLAMVHNFPRTLEALILYLLSPVGAEVLTRKFEEMDQHITEEERNEFYQLFYGVFDDQF 181

Query: 575 AAMDSILNGKESFALQAFRNVLDKYLGVNFDGPK 676
           AAM +ILNGKESFALQAF+NVLD+YLGVN+DGPK
Sbjct: 182 AAMKAILNGKESFALQAFKNVLDQYLGVNYDGPK 215


>ref|XP_002274710.2| PREDICTED: uncharacterized protein LOC100247818 [Vitis vinifera]
          Length = 508

 Score =  226 bits (575), Expect = 1e-56
 Identities = 117/194 (60%), Positives = 142/194 (73%)
 Frame = +2

Query: 95  FDSVDQNGTKVTKAANQKEKIMLDQLKPSALQALHELVSLVHDSVNVNVKIQPVXXXXXX 274
           FD      +K  K +  K++IML +++P ALQALH+LV+LVHDSV V  + +PV      
Sbjct: 311 FDLDQTCASKDLKGSKLKQRIMLHEVEPLALQALHKLVALVHDSVKVADRTEPVHSTSGN 370

Query: 275 XXXXXXXXXXKKIASVNLFLLEDDPVADIVWTLKPLELQNVLLAMVYNFPRTLETLILHV 454
                     K+I + +LF LEDDP+A I+WTL+PL LQNV LAMV+NFPRTLE LIL++
Sbjct: 371 DSDVKVKSEQKRIVASDLFHLEDDPLAKILWTLEPLTLQNVFLAMVHNFPRTLEALILYL 430

Query: 455 LSPVGAEVLTRKFXXXXXXXXXXXRNEFYQIFYGVFDDQFAAMDSILNGKESFALQAFRN 634
           LSPVGAEVLTRKF           RNEFYQ+FYGVFDDQFAAM +ILNGKESFALQAF+N
Sbjct: 431 LSPVGAEVLTRKFEEMDQHITEEERNEFYQLFYGVFDDQFAAMKAILNGKESFALQAFKN 490

Query: 635 VLDKYLGVNFDGPK 676
           VLD+YLGVN+DGPK
Sbjct: 491 VLDQYLGVNYDGPK 504


>ref|XP_002520945.1| Hypoxia-inducible factor 1 alpha inhibitor, putative [Ricinus
           communis] gi|223539782|gb|EEF41362.1| Hypoxia-inducible
           factor 1 alpha inhibitor, putative [Ricinus communis]
          Length = 488

 Score =  177 bits (450), Expect = 3e-42
 Identities = 98/179 (54%), Positives = 116/179 (64%)
 Frame = +2

Query: 131 KAANQKEKIMLDQLKPSALQALHELVSLVHDSVNVNVKIQPVXXXXXXXXXXXXXXXXKK 310
           K +  K+K  L+ L+  +LQALHELVSLVHD VN+    +PV                  
Sbjct: 315 KDSQGKDKHHLNVLESFSLQALHELVSLVHDCVNLADPSEPVTATND------------S 362

Query: 311 IASVNLFLLEDDPVADIVWTLKPLELQNVLLAMVYNFPRTLETLILHVLSPVGAEVLTRK 490
             + NL   EDD VA  +  L P  LQNVLL+M +NFPRTLE L+LH+LSP GAEVLTRK
Sbjct: 363 AVTANLLFPEDDAVAKFLGALDPHTLQNVLLSMAHNFPRTLEALVLHLLSPAGAEVLTRK 422

Query: 491 FXXXXXXXXXXXRNEFYQIFYGVFDDQFAAMDSILNGKESFALQAFRNVLDKYLGVNFD 667
           F           RN+FY++FYG FDDQFAAMD+ILN KESFA QAF+NVLDKYLGVN D
Sbjct: 423 FDEIDQQNTEEDRNKFYRVFYGAFDDQFAAMDAILNAKESFAFQAFKNVLDKYLGVNSD 481


>ref|XP_003590573.1| JmjC domain-containing protein D [Medicago truncatula]
           gi|355479621|gb|AES60824.1| JmjC domain-containing
           protein D [Medicago truncatula]
          Length = 539

 Score =  173 bits (438), Expect = 8e-41
 Identities = 97/195 (49%), Positives = 123/195 (63%), Gaps = 5/195 (2%)
 Frame = +2

Query: 107 DQNGTKVTKAANQKEKIMLD-----QLKPSALQALHELVSLVHDSVNVNVKIQPVXXXXX 271
           D+N +++ K  + KEK + +     +L+P+A+Q LHELVSLVH+SV+ +   Q +     
Sbjct: 345 DENCSQMLKGMDLKEKRLKEGNTLLELEPAAVQVLHELVSLVHNSVSASQDQQSLSTSIN 404

Query: 272 XXXXXXXXXXXKKIASVNLFLLEDDPVADIVWTLKPLELQNVLLAMVYNFPRTLETLILH 451
                      K   S     L+DDPVA I+W +KP  LQNV LAM  NFPRTLE L+LH
Sbjct: 405 DYDLIGSDKYEKIATSE----LKDDPVAKILWNVKPQTLQNVFLAMANNFPRTLEALVLH 460

Query: 452 VLSPVGAEVLTRKFXXXXXXXXXXXRNEFYQIFYGVFDDQFAAMDSILNGKESFALQAFR 631
           VLSPVGAEVLTRKF           RN FY++FY  FDDQ AAM+SIL GKE F  QAF+
Sbjct: 461 VLSPVGAEVLTRKFDEMDELTIEEDRNRFYEVFYSAFDDQSAAMNSILKGKELFTQQAFK 520

Query: 632 NVLDKYLGVNFDGPK 676
           NVLDK++GVN +  K
Sbjct: 521 NVLDKFVGVNLECSK 535


>ref|XP_002307610.1| predicted protein [Populus trichocarpa] gi|222857059|gb|EEE94606.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score =  172 bits (436), Expect = 1e-40
 Identities = 92/164 (56%), Positives = 108/164 (65%)
 Frame = +2

Query: 131 KAANQKEKIMLDQLKPSALQALHELVSLVHDSVNVNVKIQPVXXXXXXXXXXXXXXXXKK 310
           K   Q + + L +L+P +LQALHELVS+VHD VN+  + Q +                 K
Sbjct: 24  KQGLQGKDLKLHELEPFSLQALHELVSVVHDRVNITDQSQCIQSTPPNDSKVSVKHECDK 83

Query: 311 IASVNLFLLEDDPVADIVWTLKPLELQNVLLAMVYNFPRTLETLILHVLSPVGAEVLTRK 490
             +  LF LEDDPVA I+WT  P  LQNVLLAM +NFPRTLE L+LH+LSPVGAEVLTRK
Sbjct: 84  TLTSKLFFLEDDPVAKILWTFDPSTLQNVLLAMAHNFPRTLEALMLHLLSPVGAEVLTRK 143

Query: 491 FXXXXXXXXXXXRNEFYQIFYGVFDDQFAAMDSILNGKESFALQ 622
           F           RN+FYQ FYG FDDQFAAMD+ILNGKE FALQ
Sbjct: 144 FDEVDQHTTEDDRNKFYQGFYGAFDDQFAAMDAILNGKELFALQ 187


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