BLASTX nr result

ID: Coptis25_contig00009919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009919
         (1279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133837.1| PREDICTED: mitochondrial substrate carrier f...   501   e-139
ref|XP_002320851.1| predicted protein [Populus trichocarpa] gi|2...   494   e-137
ref|XP_002273414.1| PREDICTED: mitochondrial substrate carrier f...   491   e-136
ref|XP_002509930.1| Grave disease carrier protein, putative [Ric...   491   e-136
ref|XP_002532663.1| Grave disease carrier protein, putative [Ric...   490   e-136

>ref|XP_004133837.1| PREDICTED: mitochondrial substrate carrier family protein B-like
            [Cucumis sativus] gi|449480266|ref|XP_004155845.1|
            PREDICTED: mitochondrial substrate carrier family protein
            B-like [Cucumis sativus]
          Length = 354

 Score =  501 bits (1290), Expect = e-139
 Identities = 248/287 (86%), Positives = 265/287 (92%)
 Frame = -3

Query: 1277 LQVQNPHTIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFYSYEQASRGIL 1098
            LQVQNPH+IKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKF+SYEQASRGIL
Sbjct: 68   LQVQNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASRGIL 127

Query: 1097 WLYRQQTGNEDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTDKSPYQYRGIFH 918
            + YR+QTG++DAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTDKSPYQYRGIFH
Sbjct: 128  YFYREQTGDQDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTDKSPYQYRGIFH 187

Query: 917  ALTTVFREEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLLKTRPFGLVEDSELSVP 738
            AL+TV REEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWL+K +PFGLV+DSELSV 
Sbjct: 188  ALSTVLREEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLIKNKPFGLVDDSELSVT 247

Query: 737  TRLXXXXXXXXXXXXXAYPLDVIRRRMQMVGWNNASSVVSGDGTTKAIPAYTGMVDAFRK 558
            TRL             AYPLDVIRRRMQMVGWNNA+SVV+GDG +KA   YTGMVDAFRK
Sbjct: 248  TRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWNNAASVVTGDGRSKASLEYTGMVDAFRK 307

Query: 557  TVRHEGFKALYKGLVPNSVKVVPSIAIAFVTYETVKDVLGVEMKISD 417
            TVR+EGF+ALYKGLVPNSVKVVPSIAIAFVTYE VKDVLGVE++ISD
Sbjct: 308  TVRYEGFRALYKGLVPNSVKVVPSIAIAFVTYEMVKDVLGVEIRISD 354


>ref|XP_002320851.1| predicted protein [Populus trichocarpa] gi|222861624|gb|EEE99166.1|
            predicted protein [Populus trichocarpa]
          Length = 354

 Score =  494 bits (1273), Expect = e-137
 Identities = 246/287 (85%), Positives = 260/287 (90%)
 Frame = -3

Query: 1277 LQVQNPHTIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFYSYEQASRGIL 1098
            LQVQNPH IKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKF+SYEQASRGIL
Sbjct: 68   LQVQNPHNIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASRGIL 127

Query: 1097 WLYRQQTGNEDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTDKSPYQYRGIFH 918
             LY+QQTGNEDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTDKSPYQYRG+FH
Sbjct: 128  SLYQQQTGNEDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTDKSPYQYRGMFH 187

Query: 917  ALTTVFREEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLLKTRPFGLVEDSELSVP 738
            AL+TV R+EGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWL+K RPFGLVEDSELSV 
Sbjct: 188  ALSTVLRQEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLVKARPFGLVEDSELSVT 247

Query: 737  TRLXXXXXXXXXXXXXAYPLDVIRRRMQMVGWNNASSVVSGDGTTKAIPAYTGMVDAFRK 558
            TRL             AYPLDVIRRRMQMVGW +A+S+V+GDG +KA   Y GM+D FRK
Sbjct: 248  TRLACGAAAGTIGQTVAYPLDVIRRRMQMVGWKDAASIVTGDGRSKAPLEYNGMIDTFRK 307

Query: 557  TVRHEGFKALYKGLVPNSVKVVPSIAIAFVTYETVKDVLGVEMKISD 417
            TVRHEGF ALYKGLVPNSVKVVPSIAIAFVTYE VKDVLGVE++ISD
Sbjct: 308  TVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDVLGVEIRISD 354


>ref|XP_002273414.1| PREDICTED: mitochondrial substrate carrier family protein B [Vitis
            vinifera] gi|297742308|emb|CBI34457.3| unnamed protein
            product [Vitis vinifera]
          Length = 354

 Score =  491 bits (1265), Expect = e-136
 Identities = 244/287 (85%), Positives = 259/287 (90%)
 Frame = -3

Query: 1277 LQVQNPHTIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFYSYEQASRGIL 1098
            LQVQNPHTIKYNGTIQGLKYIW++EGFRGLFKGNGTNCARIVPNSAVKFYSYEQAS+GIL
Sbjct: 68   LQVQNPHTIKYNGTIQGLKYIWKSEGFRGLFKGNGTNCARIVPNSAVKFYSYEQASKGIL 127

Query: 1097 WLYRQQTGNEDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTDKSPYQYRGIFH 918
            WLYRQQ GNE+A+LTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQT+KSP QYRGIFH
Sbjct: 128  WLYRQQPGNENAELTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPRQYRGIFH 187

Query: 917  ALTTVFREEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLLKTRPFGLVEDSELSVP 738
            AL+TV REEG RALYKGWLPSVIGV+PYVGLNFAVYESLKDWL+K +PFGLVEDSEL V 
Sbjct: 188  ALSTVLREEGARALYKGWLPSVIGVIPYVGLNFAVYESLKDWLMKAKPFGLVEDSELGVT 247

Query: 737  TRLXXXXXXXXXXXXXAYPLDVIRRRMQMVGWNNASSVVSGDGTTKAIPAYTGMVDAFRK 558
            TRL             AYPLDVIRRRMQMVGW +A+SVV+GDG  KA   YTGMVDAFRK
Sbjct: 248  TRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWKDAASVVTGDGRGKAPLEYTGMVDAFRK 307

Query: 557  TVRHEGFKALYKGLVPNSVKVVPSIAIAFVTYETVKDVLGVEMKISD 417
            TVRHEGF ALYKGLVPNSVKVVPSIAIAFVTYE VKD+LGVEM+ISD
Sbjct: 308  TVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEMRISD 354


>ref|XP_002509930.1| Grave disease carrier protein, putative [Ricinus communis]
            gi|223549829|gb|EEF51317.1| Grave disease carrier
            protein, putative [Ricinus communis]
          Length = 355

 Score =  491 bits (1264), Expect = e-136
 Identities = 241/287 (83%), Positives = 262/287 (91%)
 Frame = -3

Query: 1277 LQVQNPHTIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFYSYEQASRGIL 1098
            LQVQNPH+IKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKF+SYE+AS+GIL
Sbjct: 69   LQVQNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEEASKGIL 128

Query: 1097 WLYRQQTGNEDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTDKSPYQYRGIFH 918
            W+YRQQTGN+DAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQT+ SP QY+GIFH
Sbjct: 129  WMYRQQTGNDDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEASPRQYKGIFH 188

Query: 917  ALTTVFREEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLLKTRPFGLVEDSELSVP 738
            AL+TV +EEGPRALY+GWLPSVIGVVPYVGLNFAVYESLKDWLLK++PFGLV+D+EL V 
Sbjct: 189  ALSTVLKEEGPRALYRGWLPSVIGVVPYVGLNFAVYESLKDWLLKSKPFGLVQDNELGVA 248

Query: 737  TRLXXXXXXXXXXXXXAYPLDVIRRRMQMVGWNNASSVVSGDGTTKAIPAYTGMVDAFRK 558
            TRL             AYPLDVIRRRMQMVGW +A+SV++GDG TKA   YTGMVDAFRK
Sbjct: 249  TRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWKDAASVITGDGKTKAPLEYTGMVDAFRK 308

Query: 557  TVRHEGFKALYKGLVPNSVKVVPSIAIAFVTYETVKDVLGVEMKISD 417
            TVRHEGF ALYKGLVPNSVKVVPSIAIAFVTYE VKDVLGVE++ISD
Sbjct: 309  TVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYELVKDVLGVEVRISD 355


>ref|XP_002532663.1| Grave disease carrier protein, putative [Ricinus communis]
            gi|223527623|gb|EEF29736.1| Grave disease carrier
            protein, putative [Ricinus communis]
          Length = 354

 Score =  490 bits (1261), Expect = e-136
 Identities = 239/287 (83%), Positives = 262/287 (91%)
 Frame = -3

Query: 1277 LQVQNPHTIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFYSYEQASRGIL 1098
            LQVQNPH IKYNGTIQGL+YIW+TEGFRGLFKGNGTNCARIVPNSAVKF+SYE+AS+GIL
Sbjct: 68   LQVQNPHNIKYNGTIQGLRYIWKTEGFRGLFKGNGTNCARIVPNSAVKFFSYEEASKGIL 127

Query: 1097 WLYRQQTGNEDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTDKSPYQYRGIFH 918
            +LYRQQTGNEDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTDKSPYQYRG+FH
Sbjct: 128  YLYRQQTGNEDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTDKSPYQYRGMFH 187

Query: 917  ALTTVFREEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLLKTRPFGLVEDSELSVP 738
            AL+TV REEGPRALYKGWLPSVIGV+PYVGLNFAVYESLK+WL+K +PFGLV+DS+LSV 
Sbjct: 188  ALSTVLREEGPRALYKGWLPSVIGVIPYVGLNFAVYESLKEWLIKAKPFGLVQDSDLSVT 247

Query: 737  TRLXXXXXXXXXXXXXAYPLDVIRRRMQMVGWNNASSVVSGDGTTKAIPAYTGMVDAFRK 558
            TRL             AYPLDVIRRRMQMVGW +ASS+V GDG +K+   YTGM+DAFRK
Sbjct: 248  TRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWKDASSIVIGDGRSKSSLEYTGMIDAFRK 307

Query: 557  TVRHEGFKALYKGLVPNSVKVVPSIAIAFVTYETVKDVLGVEMKISD 417
            TVR+EGF ALYKGLVPNSVKVVPSIAIAFVTYE VKD+LGVE++ISD
Sbjct: 308  TVRYEGFGALYKGLVPNSVKVVPSIAIAFVTYEVVKDILGVEIRISD 354


Top