BLASTX nr result

ID: Coptis25_contig00009914 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009914
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284082.1| PREDICTED: uncharacterized protein LOC100259...   116   2e-24
ref|XP_003632461.1| PREDICTED: uncharacterized protein LOC100852...   114   6e-24
emb|CAN75833.1| hypothetical protein VITISV_039637 [Vitis vinifera]   114   6e-24
ref|XP_002310171.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_002307239.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22

>ref|XP_002284082.1| PREDICTED: uncharacterized protein LOC100259174 isoform 1 [Vitis
           vinifera]
          Length = 950

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
 Frame = +1

Query: 16  LAPVFPQYLCDSIDGLDGLAGIEDQGDDGSDELTPETDTGP-QLPAFSGVFSSSQVRDVF 192
           + PVFPQYL DS+DGLDGL G  D   +  +EL  ET  G  Q+PAFSGVF+S+QVRDVF
Sbjct: 401 ILPVFPQYLSDSMDGLDGLGGHNDNASNDDEELMTETHGGSSQMPAFSGVFTSTQVRDVF 460

Query: 193 ETDMDQDNSSDRDGASTIFEEGDSIS 270
           ET++DQDNSSDRDGASTI EE +SIS
Sbjct: 461 ETELDQDNSSDRDGASTIIEEAESIS 486


>ref|XP_003632461.1| PREDICTED: uncharacterized protein LOC100852514 [Vitis vinifera]
          Length = 914

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
 Frame = +1

Query: 16  LAPVFPQYLCDSIDGLDGLAGIEDQGDDGSDELTPET-DTGPQLPAFSGVFSSSQVRDVF 192
           + PVFPQYL DS+DG DGL G+ED    G+ ELT ET    P  PAFSGV++S+QVRDVF
Sbjct: 399 ITPVFPQYLSDSMDGFDGLGGMEDDEVGGNGELTSETRKESPLPPAFSGVYTSAQVRDVF 458

Query: 193 ETDMDQDNSSDRDGASTIFEEGDSIS 270
           ET++DQDNSSDRDGASTI EE +SIS
Sbjct: 459 ETELDQDNSSDRDGASTILEETESIS 484


>emb|CAN75833.1| hypothetical protein VITISV_039637 [Vitis vinifera]
          Length = 1281

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
 Frame = +1

Query: 16  LAPVFPQYLCDSIDGLDGLAGIEDQGDDGSDELTPET-DTGPQLPAFSGVFSSSQVRDVF 192
           + PVFPQYL DS+DG DGL G+ED    G+ ELT ET    P  PAFSGV++S+QVRDVF
Sbjct: 742 ITPVFPQYLSDSMDGFDGLGGMEDDEVGGNGELTSETRKESPLPPAFSGVYTSAQVRDVF 801

Query: 193 ETDMDQDNSSDRDGASTIFEEGDSIS 270
           ET++DQDNSSDRDGASTI EE +SIS
Sbjct: 802 ETELDQDNSSDRDGASTILEETESIS 827


>ref|XP_002310171.1| predicted protein [Populus trichocarpa] gi|222853074|gb|EEE90621.1|
           predicted protein [Populus trichocarpa]
          Length = 893

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/85 (64%), Positives = 65/85 (76%)
 Frame = +1

Query: 16  LAPVFPQYLCDSIDGLDGLAGIEDQGDDGSDELTPETDTGPQLPAFSGVFSSSQVRDVFE 195
           + P +P YL DS+DGLDGL G+ED    G+ E T E   G QLPAFSG F+S+QVRDVFE
Sbjct: 399 ITPEYPMYLSDSVDGLDGLVGVEDDEVAGNAEKTTEIRPGSQLPAFSGAFTSAQVRDVFE 458

Query: 196 TDMDQDNSSDRDGASTIFEEGDSIS 270
           T+MD +NSSDRDG STIFEE +SIS
Sbjct: 459 TEMDHENSSDRDGTSTIFEETESIS 483


>ref|XP_002307239.1| predicted protein [Populus trichocarpa] gi|222856688|gb|EEE94235.1|
           predicted protein [Populus trichocarpa]
          Length = 909

 Score =  110 bits (275), Expect = 1e-22
 Identities = 55/85 (64%), Positives = 63/85 (74%)
 Frame = +1

Query: 16  LAPVFPQYLCDSIDGLDGLAGIEDQGDDGSDELTPETDTGPQLPAFSGVFSSSQVRDVFE 195
           + P FP YL DS+DGLDGL GIED    G+ E   E     QLPAFSG F+SSQVRDVFE
Sbjct: 399 ITPEFPMYLSDSVDGLDGLVGIEDDEVAGNAEKATENHPVTQLPAFSGAFTSSQVRDVFE 458

Query: 196 TDMDQDNSSDRDGASTIFEEGDSIS 270
           T+M+ +NSSDRDG STIFEE +SIS
Sbjct: 459 TEMEHENSSDRDGTSTIFEETESIS 483


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