BLASTX nr result
ID: Coptis25_contig00009909
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00009909
(1083 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002511587.1| cop9 complex subunit 7a, putative [Ricinus c... 324 2e-86
ref|XP_002302493.1| predicted protein [Populus trichocarpa] gi|2... 321 2e-85
emb|CAN69751.1| hypothetical protein VITISV_024935 [Vitis vinifera] 319 9e-85
ref|XP_003633896.1| PREDICTED: COP9 signalosome complex subunit ... 316 7e-84
ref|XP_002273686.1| PREDICTED: COP9 signalosome complex subunit ... 316 7e-84
>ref|XP_002511587.1| cop9 complex subunit 7a, putative [Ricinus communis]
gi|223548767|gb|EEF50256.1| cop9 complex subunit 7a,
putative [Ricinus communis]
Length = 275
Score = 324 bits (831), Expect = 2e-86
Identities = 159/224 (70%), Positives = 192/224 (85%)
Frame = -2
Query: 989 MDVEQKQADLIEYFVKQAQSQKGDSLGKLIVEATSHPLLFGFSEILSVPNVIELQGIEHS 810
M++EQKQA+LI++FVK A + KG +LG +IVEATSHP LF FSEIL+VP V EL+G+++S
Sbjct: 1 MEIEQKQAELIDHFVKIASALKGSALGPVIVEATSHPSLFAFSEILAVPTVAELEGVDNS 60
Query: 809 AYLDLLRLFAHGTWSDYKSNAGFLPALVPDQVRKLKQLSVLTLSETDKVLPYDKLMQELD 630
YLD+LRLFAHGTW+DYK+N+G LP L+PDQV KLKQL+VLTL+ET+KVLPYD+LMQELD
Sbjct: 61 VYLDVLRLFAHGTWTDYKNNSGRLPQLIPDQVLKLKQLTVLTLAETNKVLPYDQLMQELD 120
Query: 629 VSNVRELEDFLINDCMYAGIVRGKLDQLRRCFEVQFAAGRDLRAEQLGGMIQXXXXXXXX 450
V+NVRELEDFLIN+CMYAGIVRGKLDQLRRCFEVQFAAGRDLR EQLG M+Q
Sbjct: 121 VTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPEQLGNMLQTLSNWLST 180
Query: 449 XXXXXXSIQEKIKWADTMSDLDKKHKKEFEDKVEDAKKCLTIKV 318
SIQEKIKWADTMS+LDK+H+K+ EDKVE+ KK L++K+
Sbjct: 181 SENLLVSIQEKIKWADTMSELDKRHRKDVEDKVEEVKKTLSLKM 224
>ref|XP_002302493.1| predicted protein [Populus trichocarpa] gi|222844219|gb|EEE81766.1|
predicted protein [Populus trichocarpa]
Length = 225
Score = 321 bits (822), Expect = 2e-85
Identities = 161/225 (71%), Positives = 188/225 (83%)
Frame = -2
Query: 989 MDVEQKQADLIEYFVKQAQSQKGDSLGKLIVEATSHPLLFGFSEILSVPNVIELQGIEHS 810
MD+EQKQA+LI++FV QA + K +L LI+EATSHP LF FSEILSVP V ELQG E+S
Sbjct: 1 MDIEQKQAELIDHFVNQASTLKASALWPLIIEATSHPSLFAFSEILSVPTVSELQGTENS 60
Query: 809 AYLDLLRLFAHGTWSDYKSNAGFLPALVPDQVRKLKQLSVLTLSETDKVLPYDKLMQELD 630
YLD+LRLFAHGTW+DYK+NAG LP LVPDQV KLKQL+VLTL+E +KVLPYD+LMQELD
Sbjct: 61 LYLDVLRLFAHGTWTDYKNNAGHLPQLVPDQVLKLKQLTVLTLAEMNKVLPYDQLMQELD 120
Query: 629 VSNVRELEDFLINDCMYAGIVRGKLDQLRRCFEVQFAAGRDLRAEQLGGMIQXXXXXXXX 450
V+NVRELEDFLIN+CMYAGIVRGKLDQLRRCFEVQFAAGRDLR QLG M+Q
Sbjct: 121 VTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGNMLQTLSNWLAT 180
Query: 449 XXXXXXSIQEKIKWADTMSDLDKKHKKEFEDKVEDAKKCLTIKVS 315
SIQEKIKWAD+MS+LDKKH+K+ +D+VE+ KK L++KVS
Sbjct: 181 SDNLLVSIQEKIKWADSMSELDKKHRKDVDDRVEEVKKSLSLKVS 225
>emb|CAN69751.1| hypothetical protein VITISV_024935 [Vitis vinifera]
Length = 225
Score = 319 bits (817), Expect = 9e-85
Identities = 160/225 (71%), Positives = 186/225 (82%)
Frame = -2
Query: 989 MDVEQKQADLIEYFVKQAQSQKGDSLGKLIVEATSHPLLFGFSEILSVPNVIELQGIEHS 810
MD+EQ+QA+LI+ FVKQA + G +L +I++ATSHP LF FSEIL+VPNV+EL G E+S
Sbjct: 1 MDIEQRQAELIDAFVKQASTHNGSALATVILDATSHPSLFAFSEILAVPNVVELGGTENS 60
Query: 809 AYLDLLRLFAHGTWSDYKSNAGFLPALVPDQVRKLKQLSVLTLSETDKVLPYDKLMQELD 630
YLD+LRLFAHGTWSDYKSN LP LVPDQ KLKQL+VLTL+ET+KVLPYD+LMQELD
Sbjct: 61 VYLDMLRLFAHGTWSDYKSNVDRLPQLVPDQALKLKQLTVLTLAETNKVLPYDQLMQELD 120
Query: 629 VSNVRELEDFLINDCMYAGIVRGKLDQLRRCFEVQFAAGRDLRAEQLGGMIQXXXXXXXX 450
V+NVRELEDFLIN+CMYAGIVRGKLDQLRRCFEVQFAAGRDLR QLG MIQ
Sbjct: 121 VTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGCMIQTLSNWLGT 180
Query: 449 XXXXXXSIQEKIKWADTMSDLDKKHKKEFEDKVEDAKKCLTIKVS 315
SIQEKIKWADTMS+LDKKH+KE E++VE+ KK ++KVS
Sbjct: 181 SDNLLLSIQEKIKWADTMSELDKKHRKEVEERVEEVKKSFSVKVS 225
>ref|XP_003633896.1| PREDICTED: COP9 signalosome complex subunit 7 isoform 2 [Vitis
vinifera]
Length = 247
Score = 316 bits (809), Expect = 7e-84
Identities = 158/223 (70%), Positives = 184/223 (82%)
Frame = -2
Query: 989 MDVEQKQADLIEYFVKQAQSQKGDSLGKLIVEATSHPLLFGFSEILSVPNVIELQGIEHS 810
MD+EQ+QA+LI+ FVKQA + G +L +I++ATSHP LF FSEIL+VPNV+EL G E+S
Sbjct: 1 MDIEQRQAELIDAFVKQASTHNGSALATVILDATSHPSLFAFSEILAVPNVVELGGTENS 60
Query: 809 AYLDLLRLFAHGTWSDYKSNAGFLPALVPDQVRKLKQLSVLTLSETDKVLPYDKLMQELD 630
YLD+LRLFAHGTWSDYKSN LP LVPDQ KLKQL+VLTL+ET+KVLPYD+LMQELD
Sbjct: 61 VYLDMLRLFAHGTWSDYKSNVDRLPQLVPDQALKLKQLTVLTLAETNKVLPYDQLMQELD 120
Query: 629 VSNVRELEDFLINDCMYAGIVRGKLDQLRRCFEVQFAAGRDLRAEQLGGMIQXXXXXXXX 450
V+NVRELEDFLIN+CMYAGIVRGKLDQLRRCFEVQFAAGRDLR QLG MIQ
Sbjct: 121 VTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGCMIQTLSNWLGT 180
Query: 449 XXXXXXSIQEKIKWADTMSDLDKKHKKEFEDKVEDAKKCLTIK 321
SIQEKIKWADTMS+LDKKH+KE E++VE+ KK ++K
Sbjct: 181 SDNLLLSIQEKIKWADTMSELDKKHRKEVEERVEEVKKSFSVK 223
>ref|XP_002273686.1| PREDICTED: COP9 signalosome complex subunit 7 isoform 1 [Vitis
vinifera] gi|297734611|emb|CBI16662.3| unnamed protein
product [Vitis vinifera]
Length = 259
Score = 316 bits (809), Expect = 7e-84
Identities = 158/223 (70%), Positives = 184/223 (82%)
Frame = -2
Query: 989 MDVEQKQADLIEYFVKQAQSQKGDSLGKLIVEATSHPLLFGFSEILSVPNVIELQGIEHS 810
MD+EQ+QA+LI+ FVKQA + G +L +I++ATSHP LF FSEIL+VPNV+EL G E+S
Sbjct: 1 MDIEQRQAELIDAFVKQASTHNGSALATVILDATSHPSLFAFSEILAVPNVVELGGTENS 60
Query: 809 AYLDLLRLFAHGTWSDYKSNAGFLPALVPDQVRKLKQLSVLTLSETDKVLPYDKLMQELD 630
YLD+LRLFAHGTWSDYKSN LP LVPDQ KLKQL+VLTL+ET+KVLPYD+LMQELD
Sbjct: 61 VYLDMLRLFAHGTWSDYKSNVDRLPQLVPDQALKLKQLTVLTLAETNKVLPYDQLMQELD 120
Query: 629 VSNVRELEDFLINDCMYAGIVRGKLDQLRRCFEVQFAAGRDLRAEQLGGMIQXXXXXXXX 450
V+NVRELEDFLIN+CMYAGIVRGKLDQLRRCFEVQFAAGRDLR QLG MIQ
Sbjct: 121 VTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGCMIQTLSNWLGT 180
Query: 449 XXXXXXSIQEKIKWADTMSDLDKKHKKEFEDKVEDAKKCLTIK 321
SIQEKIKWADTMS+LDKKH+KE E++VE+ KK ++K
Sbjct: 181 SDNLLLSIQEKIKWADTMSELDKKHRKEVEERVEEVKKSFSVK 223