BLASTX nr result

ID: Coptis25_contig00009907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009907
         (1276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281168.1| PREDICTED: ABC transporter I family member 2...   510   e-142
emb|CAN66319.1| hypothetical protein VITISV_040623 [Vitis vinifera]   510   e-142
ref|XP_003633613.1| PREDICTED: ABC transporter I family member 2...   500   e-139
ref|XP_002308160.1| ABC transporter family protein [Populus tric...   493   e-137
ref|XP_003536037.1| PREDICTED: ABC transporter I family member 2...   489   e-136

>ref|XP_002281168.1| PREDICTED: ABC transporter I family member 20 isoform 1 [Vitis
            vinifera] gi|296089817|emb|CBI39636.3| unnamed protein
            product [Vitis vinifera]
          Length = 329

 Score =  510 bits (1313), Expect = e-142
 Identities = 250/319 (78%), Positives = 274/319 (85%)
 Frame = +3

Query: 81   TIVIDNLRFTYPGIDGHPPPGSTPLIENFSLSLNAGERCLLVGSNGAGKTTILKILGGKH 260
            T+ I+NLRFTYPGIDG PPPGSTPLI++FSL+LN+G+RCLLVGSNGAGKTTILKILGGKH
Sbjct: 10   TVEINNLRFTYPGIDGQPPPGSTPLIDHFSLTLNSGDRCLLVGSNGAGKTTILKILGGKH 69

Query: 261  MVDPHMVRVFGRSAFHHTALISSGVLCYLGGEWRRDVAFAGFDIPIQMDIAAEKMIFGVS 440
            MV+PHMVRV GRSAFH TAL SSG LCYLGGEWRRDVAFAGF++PIQMD++AEKMIFGVS
Sbjct: 70   MVEPHMVRVLGRSAFHDTALTSSGDLCYLGGEWRRDVAFAGFEVPIQMDVSAEKMIFGVS 129

Query: 441  GIDPQRRTELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXX 620
            GIDPQRR ELIKVLDIDLSWR+HKVSDGQRRRVQICMGLLKPFKVLLLDEIT        
Sbjct: 130  GIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLAR 189

Query: 621  XXXXNFLKKECQERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKEISNLSL 800
                 FL+KEC+ERGATIIYATHIFDGLENWPSH+VYVAHGKLQLAMPM+KV+E+SNLSL
Sbjct: 190  ADLLKFLRKECEERGATIIYATHIFDGLENWPSHLVYVAHGKLQLAMPMEKVREMSNLSL 249

Query: 801  MRTVECWLXXXXXXXXXXXXXXXASGLSEFKDQIDGSRVIGGPAQNSARALNNGWAAGRL 980
            MRTVE WL               A GL EF+ Q++GSRV G PA+ + RALNNGWAAGRL
Sbjct: 250  MRTVESWLRKERDEGRKRRKERKAVGLPEFESQVEGSRVAGDPARAAVRALNNGWAAGRL 309

Query: 981  HSTIAGEENFLLSSNRVLR 1037
            HSTIAGEENF LSSN VLR
Sbjct: 310  HSTIAGEENFFLSSNSVLR 328


>emb|CAN66319.1| hypothetical protein VITISV_040623 [Vitis vinifera]
          Length = 329

 Score =  510 bits (1313), Expect = e-142
 Identities = 250/319 (78%), Positives = 274/319 (85%)
 Frame = +3

Query: 81   TIVIDNLRFTYPGIDGHPPPGSTPLIENFSLSLNAGERCLLVGSNGAGKTTILKILGGKH 260
            T+ I+NLRFTYPGIDG PPPGSTPLI++FSL+LN+G+RCLLVGSNGAGKTTILKILGGKH
Sbjct: 10   TVEINNLRFTYPGIDGQPPPGSTPLIDHFSLTLNSGDRCLLVGSNGAGKTTILKILGGKH 69

Query: 261  MVDPHMVRVFGRSAFHHTALISSGVLCYLGGEWRRDVAFAGFDIPIQMDIAAEKMIFGVS 440
            MV+PHMVRV GRSAFH TAL SSG LCYLGGEWRRDVAFAGF++PIQMD++AEKMIFGVS
Sbjct: 70   MVEPHMVRVLGRSAFHDTALTSSGDLCYLGGEWRRDVAFAGFEVPIQMDVSAEKMIFGVS 129

Query: 441  GIDPQRRTELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXX 620
            GIDPQRR ELIKVLDIDLSWR+HKVSDGQRRRVQICMGLLKPFKVLLLDEIT        
Sbjct: 130  GIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLAR 189

Query: 621  XXXXNFLKKECQERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKEISNLSL 800
                 FL+KEC+ERGATIIYATHIFDGLENWPSH+VYVAHGKLQLAMPM+KV+E+SNLSL
Sbjct: 190  ADLLKFLRKECEERGATIIYATHIFDGLENWPSHLVYVAHGKLQLAMPMEKVREMSNLSL 249

Query: 801  MRTVECWLXXXXXXXXXXXXXXXASGLSEFKDQIDGSRVIGGPAQNSARALNNGWAAGRL 980
            MRTVE WL               A GL EF+ Q++GSRV G PA+ + RALNNGWAAGRL
Sbjct: 250  MRTVESWLRKERDEGRKRRKERKAVGLPEFESQVEGSRVAGDPARAAVRALNNGWAAGRL 309

Query: 981  HSTIAGEENFLLSSNRVLR 1037
            HSTIAGEENF LSSN VLR
Sbjct: 310  HSTIAGEENFFLSSNSVLR 328


>ref|XP_003633613.1| PREDICTED: ABC transporter I family member 20 isoform 2 [Vitis
            vinifera]
          Length = 343

 Score =  500 bits (1288), Expect = e-139
 Identities = 250/333 (75%), Positives = 274/333 (82%), Gaps = 14/333 (4%)
 Frame = +3

Query: 81   TIVIDNLRFTYPGIDGHPPPGSTPLIENFSLSLNAGERCLLVGSNGAGKTTILKILGGKH 260
            T+ I+NLRFTYPGIDG PPPGSTPLI++FSL+LN+G+RCLLVGSNGAGKTTILKILGGKH
Sbjct: 10   TVEINNLRFTYPGIDGQPPPGSTPLIDHFSLTLNSGDRCLLVGSNGAGKTTILKILGGKH 69

Query: 261  MVDPHMVRVFGRSAFHHTALISSGVLCYLGGEWRRDVAFAGFDIPIQMDIAAEKMIFGVS 440
            MV+PHMVRV GRSAFH TAL SSG LCYLGGEWRRDVAFAGF++PIQMD++AEKMIFGVS
Sbjct: 70   MVEPHMVRVLGRSAFHDTALTSSGDLCYLGGEWRRDVAFAGFEVPIQMDVSAEKMIFGVS 129

Query: 441  GIDPQRRTELIKV--------------LDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVL 578
            GIDPQRR ELIKV              LDIDLSWR+HKVSDGQRRRVQICMGLLKPFKVL
Sbjct: 130  GIDPQRRAELIKVRCESETPKLQSCNVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVL 189

Query: 579  LLDEITXXXXXXXXXXXXNFLKKECQERGATIIYATHIFDGLENWPSHIVYVAHGKLQLA 758
            LLDEIT             FL+KEC+ERGATIIYATHIFDGLENWPSH+VYVAHGKLQLA
Sbjct: 190  LLDEITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLENWPSHLVYVAHGKLQLA 249

Query: 759  MPMDKVKEISNLSLMRTVECWLXXXXXXXXXXXXXXXASGLSEFKDQIDGSRVIGGPAQN 938
            MPM+KV+E+SNLSLMRTVE WL               A GL EF+ Q++GSRV G PA+ 
Sbjct: 250  MPMEKVREMSNLSLMRTVESWLRKERDEGRKRRKERKAVGLPEFESQVEGSRVAGDPARA 309

Query: 939  SARALNNGWAAGRLHSTIAGEENFLLSSNRVLR 1037
            + RALNNGWAAGRLHSTIAGEENF LSSN VLR
Sbjct: 310  AVRALNNGWAAGRLHSTIAGEENFFLSSNSVLR 342


>ref|XP_002308160.1| ABC transporter family protein [Populus trichocarpa]
            gi|222854136|gb|EEE91683.1| ABC transporter family
            protein [Populus trichocarpa]
          Length = 325

 Score =  493 bits (1270), Expect = e-137
 Identities = 243/319 (76%), Positives = 267/319 (83%)
 Frame = +3

Query: 81   TIVIDNLRFTYPGIDGHPPPGSTPLIENFSLSLNAGERCLLVGSNGAGKTTILKILGGKH 260
            TIVI+ LRFTYPGIDGHPPPGS PLI+ FSL+LN+G+RCLLVGSNGAGKTTILKILGGKH
Sbjct: 7    TIVINGLRFTYPGIDGHPPPGSKPLIDEFSLNLNSGDRCLLVGSNGAGKTTILKILGGKH 66

Query: 261  MVDPHMVRVFGRSAFHHTALISSGVLCYLGGEWRRDVAFAGFDIPIQMDIAAEKMIFGVS 440
            MV+P MVRV GRSAFH TAL SSG L YLGGEWRR+VAFAGF++PIQMDI+AEKMIFGV+
Sbjct: 67   MVEPQMVRVLGRSAFHDTALTSSGHLSYLGGEWRREVAFAGFEVPIQMDISAEKMIFGVA 126

Query: 441  GIDPQRRTELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXX 620
            GIDPQRR ELIKVLDIDLSWRMHKVSDGQRRRVQICMGLL+PFKVLLLDEIT        
Sbjct: 127  GIDPQRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLRPFKVLLLDEITVDLDVLAR 186

Query: 621  XXXXNFLKKECQERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKEISNLSL 800
                 FL+KEC+ERGATIIYATHIFDGLE WP+HI+YVAHGKLQ A+PM K+KE SNLSL
Sbjct: 187  ADLLKFLRKECEERGATIIYATHIFDGLEEWPTHILYVAHGKLQFALPMAKIKETSNLSL 246

Query: 801  MRTVECWLXXXXXXXXXXXXXXXASGLSEFKDQIDGSRVIGGPAQNSARALNNGWAAGRL 980
            MRTVE WL               A GL E++ Q++GSRV G PA+  AR +NNGWAAGRL
Sbjct: 247  MRTVESWLRKERDEERKRRQERKAGGLPEYEKQVEGSRVTGDPARVGARVMNNGWAAGRL 306

Query: 981  HSTIAGEENFLLSSNRVLR 1037
            HSTIAGEENF LSSNRVLR
Sbjct: 307  HSTIAGEENFFLSSNRVLR 325


>ref|XP_003536037.1| PREDICTED: ABC transporter I family member 20-like [Glycine max]
          Length = 333

 Score =  489 bits (1260), Expect = e-136
 Identities = 242/319 (75%), Positives = 269/319 (84%)
 Frame = +3

Query: 81   TIVIDNLRFTYPGIDGHPPPGSTPLIENFSLSLNAGERCLLVGSNGAGKTTILKILGGKH 260
            TIVI +LRFTYPGIDGHPPPGSTPLI++F+L+L++G RCLLVGSNGAGKTT+LKILGGKH
Sbjct: 14   TIVIKDLRFTYPGIDGHPPPGSTPLIQDFNLTLSSGHRCLLVGSNGAGKTTLLKILGGKH 73

Query: 261  MVDPHMVRVFGRSAFHHTALISSGVLCYLGGEWRRDVAFAGFDIPIQMDIAAEKMIFGVS 440
            +V+P MVRV GRSAFH T LISSG LCYLGGEWRRDVAFAGF++PIQMDI+A+KMIFGV 
Sbjct: 74   LVEPDMVRVLGRSAFHDTTLISSGDLCYLGGEWRRDVAFAGFEVPIQMDISAQKMIFGVP 133

Query: 441  GIDPQRRTELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEITXXXXXXXX 620
            GIDPQRR ELIKVLDIDLSWR+HKVSDGQRRRVQICMGLLKPFKVLLLDEIT        
Sbjct: 134  GIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLAR 193

Query: 621  XXXXNFLKKECQERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDKVKEISNLSL 800
                 FL+KEC ERGATIIYATHIFDGLE+WP++IVYVAHGKLQLAMPMDKVKEIS LSL
Sbjct: 194  ADLLRFLRKECDERGATIIYATHIFDGLEDWPTNIVYVAHGKLQLAMPMDKVKEISKLSL 253

Query: 801  MRTVECWLXXXXXXXXXXXXXXXASGLSEFKDQIDGSRVIGGPAQNSARALNNGWAAGRL 980
            MRTVE WL               A+GL EF  +++ SRV G PA+ + R +NNGWAAGRL
Sbjct: 254  MRTVESWLRKERDEDRKKRKERKAAGLPEFGKRVEESRVTGDPARAAVRVINNGWAAGRL 313

Query: 981  HSTIAGEENFLLSSNRVLR 1037
             ST+AGEENFLLSSNRVLR
Sbjct: 314  TSTVAGEENFLLSSNRVLR 332


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