BLASTX nr result

ID: Coptis25_contig00009881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009881
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003558495.1| PREDICTED: probable methionyl-tRNA synthetas...    82   6e-14
ref|XP_003607419.1| Methionyl-tRNA synthetase [Medicago truncatu...    81   8e-14
ref|XP_003607408.1| hypothetical protein MTR_4g077700 [Medicago ...    81   8e-14
ref|XP_004171227.1| PREDICTED: LOW QUALITY PROTEIN: probable met...    81   1e-13
ref|XP_004138937.1| PREDICTED: probable methionine--tRNA ligase-...    81   1e-13

>ref|XP_003558495.1| PREDICTED: probable methionyl-tRNA synthetase-like [Brachypodium
           distachyon]
          Length = 801

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/56 (67%), Positives = 45/56 (80%)
 Frame = -3

Query: 170 KSQAAPEVSITTLDIRVGIITDVKKHPDVDSLYVQEIDVAEETPRTVVSSLVKYIP 3
           KS+A  EV++  LDIRVG+I   +KHPD DSLYV+EID+ EE PRTVVS LVKYIP
Sbjct: 631 KSKAVEEVTVAKLDIRVGLIRKTEKHPDADSLYVEEIDIGEEAPRTVVSGLVKYIP 686


>ref|XP_003607419.1| Methionyl-tRNA synthetase [Medicago truncatula]
           gi|355508474|gb|AES89616.1| Methionyl-tRNA synthetase
           [Medicago truncatula]
          Length = 919

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/56 (69%), Positives = 45/56 (80%)
 Frame = -3

Query: 170 KSQAAPEVSITTLDIRVGIITDVKKHPDVDSLYVQEIDVAEETPRTVVSSLVKYIP 3
           K+ A PE++IT LDIRVG+I   +KHPD DSLYV+EIDV EE  RTVVS LVKYIP
Sbjct: 749 KAAAEPEITITRLDIRVGLIKKAEKHPDADSLYVEEIDVGEEQTRTVVSGLVKYIP 804


>ref|XP_003607408.1| hypothetical protein MTR_4g077700 [Medicago truncatula]
           gi|355508463|gb|AES89605.1| hypothetical protein
           MTR_4g077700 [Medicago truncatula]
          Length = 806

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/56 (69%), Positives = 45/56 (80%)
 Frame = -3

Query: 170 KSQAAPEVSITTLDIRVGIITDVKKHPDVDSLYVQEIDVAEETPRTVVSSLVKYIP 3
           K+ A PE++IT LDIRVG+I   +KHPD DSLYV+EIDV EE  RTVVS LVKYIP
Sbjct: 636 KAAAEPEITITRLDIRVGLIKKAEKHPDADSLYVEEIDVGEEQTRTVVSGLVKYIP 691


>ref|XP_004171227.1| PREDICTED: LOW QUALITY PROTEIN: probable methionine--tRNA
           ligase-like, partial [Cucumis sativus]
          Length = 608

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/81 (53%), Positives = 54/81 (66%)
 Frame = -3

Query: 245 RSRINRCGNCQEAGHTKPKCPWPIPKSQAAPEVSITTLDIRVGIITDVKKHPDVDSLYVQ 66
           ++ ++  G  Q+A  T  K      K+    E++IT LDIRVG+IT  +KHPD DSLYV+
Sbjct: 418 KTNVSGGGKKQQAKSTGGK-----QKAAVEQEITITRLDIRVGLITKAQKHPDADSLYVE 472

Query: 65  EIDVAEETPRTVVSSLVKYIP 3
           EIDV E  PRTVVS LVKYIP
Sbjct: 473 EIDVGESQPRTVVSGLVKYIP 493


>ref|XP_004138937.1| PREDICTED: probable methionine--tRNA ligase-like [Cucumis sativus]
          Length = 804

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/81 (53%), Positives = 54/81 (66%)
 Frame = -3

Query: 245 RSRINRCGNCQEAGHTKPKCPWPIPKSQAAPEVSITTLDIRVGIITDVKKHPDVDSLYVQ 66
           ++ ++  G  Q+A  T  K      K+    E++IT LDIRVG+IT  +KHPD DSLYV+
Sbjct: 614 KTNVSGGGKKQQAKSTGGK-----QKAAVEQEITITRLDIRVGLITKAQKHPDADSLYVE 668

Query: 65  EIDVAEETPRTVVSSLVKYIP 3
           EIDV E  PRTVVS LVKYIP
Sbjct: 669 EIDVGESQPRTVVSGLVKYIP 689


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