BLASTX nr result

ID: Coptis25_contig00009872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009872
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273048.1| PREDICTED: protein yippee-like isoform 1 [Vi...   226   7e-57
ref|NP_001236973.1| uncharacterized protein LOC100305552 [Glycin...   221   2e-55
gb|AFK44986.1| unknown [Lotus japonicus]                              215   1e-53
gb|AFK42344.1| unknown [Lotus japonicus]                              213   3e-53
ref|XP_003538458.1| PREDICTED: protein yippee-like [Glycine max]      213   3e-53

>ref|XP_002273048.1| PREDICTED: protein yippee-like isoform 1 [Vitis vinifera]
           gi|225448394|ref|XP_002273272.1| PREDICTED: protein
           yippee-like isoform 2 [Vitis vinifera]
           gi|297736625|emb|CBI25496.3| unnamed protein product
           [Vitis vinifera]
          Length = 129

 Score =  226 bits (575), Expect = 7e-57
 Identities = 102/129 (79%), Positives = 115/129 (89%)
 Frame = +3

Query: 324 MGRLYLVNLEGNFYSCKHCHTHLALSDQIISKSFHCRHGRAYLFNKVVNVSLGENEERLM 503
           MGRL++V+LEG  YSCKHC THLALS+ I+SKSFHCRHG+AYLFNKVVNVS+G +EER+M
Sbjct: 1   MGRLFVVSLEGKIYSCKHCRTHLALSEDIVSKSFHCRHGKAYLFNKVVNVSVGVHEERMM 60

Query: 504 MTGMHTVADVFCVGCGSNVGWKYEAAHEKAQKYKEGKFVLERFKISGSDGSNYWVTNETR 683
           MTGMHTVAD+FCVGCGS VGW+YE AHEKAQKYKEGK VLERFK+SG DGSNYW+T E  
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWRYETAHEKAQKYKEGKSVLERFKVSGPDGSNYWITPEAH 120

Query: 684 VVASDADDA 710
           V  SDADDA
Sbjct: 121 VGGSDADDA 129


>ref|NP_001236973.1| uncharacterized protein LOC100305552 [Glycine max]
           gi|255625885|gb|ACU13287.1| unknown [Glycine max]
          Length = 129

 Score =  221 bits (562), Expect = 2e-55
 Identities = 99/129 (76%), Positives = 113/129 (87%)
 Frame = +3

Query: 324 MGRLYLVNLEGNFYSCKHCHTHLALSDQIISKSFHCRHGRAYLFNKVVNVSLGENEERLM 503
           MGRL++VNLEG  YSCKHCHTHLAL D I S++FHCRHG+AYLFNKVVNVS+GE E+R M
Sbjct: 1   MGRLFVVNLEGKIYSCKHCHTHLALYDDIYSRTFHCRHGKAYLFNKVVNVSIGEMEDRPM 60

Query: 504 MTGMHTVADVFCVGCGSNVGWKYEAAHEKAQKYKEGKFVLERFKISGSDGSNYWVTNETR 683
           MTG+HTVAD+FCVGCGS VGWKYE A+EK QKYKEGK VLER+K+SG DGSNYW++NE  
Sbjct: 61  MTGLHTVADIFCVGCGSIVGWKYETAYEKNQKYKEGKSVLERYKVSGPDGSNYWISNEAH 120

Query: 684 VVASDADDA 710
           V  SDADDA
Sbjct: 121 VGGSDADDA 129


>gb|AFK44986.1| unknown [Lotus japonicus]
          Length = 129

 Score =  215 bits (547), Expect = 1e-53
 Identities = 95/129 (73%), Positives = 113/129 (87%)
 Frame = +3

Query: 324 MGRLYLVNLEGNFYSCKHCHTHLALSDQIISKSFHCRHGRAYLFNKVVNVSLGENEERLM 503
           MGRL++VNLEG  YSCKHC THLAL + IISK+FH R+G+AYLFNKVVN+SLGE E+R+M
Sbjct: 1   MGRLFVVNLEGRIYSCKHCRTHLALYEDIISKTFHSRNGKAYLFNKVVNISLGEKEDRMM 60

Query: 504 MTGMHTVADVFCVGCGSNVGWKYEAAHEKAQKYKEGKFVLERFKISGSDGSNYWVTNETR 683
           MTG+HTVAD+FCVGCGS VGWKYE AH+K QKYKEGK VLER+K+SG DGSNYW+++E  
Sbjct: 61  MTGLHTVADIFCVGCGSMVGWKYETAHDKGQKYKEGKSVLERYKMSGPDGSNYWISHEAN 120

Query: 684 VVASDADDA 710
           +  SDADDA
Sbjct: 121 IGGSDADDA 129


>gb|AFK42344.1| unknown [Lotus japonicus]
          Length = 129

 Score =  213 bits (543), Expect = 3e-53
 Identities = 94/129 (72%), Positives = 112/129 (86%)
 Frame = +3

Query: 324 MGRLYLVNLEGNFYSCKHCHTHLALSDQIISKSFHCRHGRAYLFNKVVNVSLGENEERLM 503
           MGRL++ NLEG  YSCKHC THLAL + IISK+FH R+G+AYLFNKVVN+SLGE E+R+M
Sbjct: 1   MGRLFVANLEGRIYSCKHCRTHLALYEDIISKTFHSRNGKAYLFNKVVNISLGEKEDRMM 60

Query: 504 MTGMHTVADVFCVGCGSNVGWKYEAAHEKAQKYKEGKFVLERFKISGSDGSNYWVTNETR 683
           MTG+HTVAD+FCVGCGS VGWKYE AH+K QKYKEGK VLER+K+SG DGSNYW+++E  
Sbjct: 61  MTGLHTVADIFCVGCGSMVGWKYETAHDKGQKYKEGKSVLERYKMSGPDGSNYWISHEAN 120

Query: 684 VVASDADDA 710
           +  SDADDA
Sbjct: 121 IGGSDADDA 129


>ref|XP_003538458.1| PREDICTED: protein yippee-like [Glycine max]
          Length = 129

 Score =  213 bits (543), Expect = 3e-53
 Identities = 97/129 (75%), Positives = 111/129 (86%)
 Frame = +3

Query: 324 MGRLYLVNLEGNFYSCKHCHTHLALSDQIISKSFHCRHGRAYLFNKVVNVSLGENEERLM 503
           MGRL++VNLEG  YSCKHCHTHLAL D I S++FHCRHG+AYLFN VVNVS+GE E+R M
Sbjct: 1   MGRLFVVNLEGKIYSCKHCHTHLALYDDIYSRTFHCRHGKAYLFNNVVNVSVGEMEDRPM 60

Query: 504 MTGMHTVADVFCVGCGSNVGWKYEAAHEKAQKYKEGKFVLERFKISGSDGSNYWVTNETR 683
           MTG+HTVAD+FCVGCGS VGWKYE A+EK QKYKEGK VLER+K+SG DGSNY ++NE  
Sbjct: 61  MTGLHTVADIFCVGCGSIVGWKYETAYEKNQKYKEGKSVLERYKVSGPDGSNYLISNEAH 120

Query: 684 VVASDADDA 710
           V  SDADDA
Sbjct: 121 VGGSDADDA 129


Top