BLASTX nr result

ID: Coptis25_contig00009866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009866
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283702.1| PREDICTED: uncharacterized protein LOC100259...   228   1e-57
gb|AFK36914.1| unknown [Lotus japonicus]                              216   3e-54
ref|NP_001239718.1| uncharacterized protein LOC100818449 [Glycin...   214   1e-53
ref|XP_004148702.1| PREDICTED: uncharacterized protein LOC101215...   214   1e-53
ref|XP_002531853.1| 60S ribosomal protein L34, putative [Ricinus...   214   1e-53

>ref|XP_002283702.1| PREDICTED: uncharacterized protein LOC100259485 [Vitis vinifera]
          Length = 231

 Score =  228 bits (580), Expect = 1e-57
 Identities = 119/222 (53%), Positives = 155/222 (69%), Gaps = 6/222 (2%)
 Frame = -2

Query: 648 ICVLMQMVYYMSNSLN----LTDSKQINQIQRNRKQPMSSKQPMKVPFCEQSRTGAIDVL 481
           +C  +     M++SLN     + S+Q N   RNRK P +S    K+P C +SR+  ID++
Sbjct: 10  VCNSVDQSGIMASSLNSGEACSKSRQNNHACRNRKTP-NSPNSAKIPDCSRSRSAMIDLV 68

Query: 480 YLIAVISAFGYLIFPSIKMFFNGIMDIGIAAFYMVKYEVCSAPLVYISIGFSLFFAMMAA 301
            LIAV+ A G+L+FP +K+  N  + +  A  Y+ K EV  AP+VY S+G S+ FA +A 
Sbjct: 69  MLIAVVGACGFLLFPYVKVVANEFVKLVGAIIYLTKEEVSRAPMVYGSLGVSVLFAAIAV 128

Query: 300 LVVFKCMDKKCGKPNCRGLSNAAEFDIQLETEDIVKNSTT--SDGGVKGIFKLSQDHHRE 127
             +  C  +KCGKPNCRGL  AAEFDIQLETE+ VKNS++   DG  KG+F+L +DHHRE
Sbjct: 129 WGILICTSRKCGKPNCRGLRKAAEFDIQLETEECVKNSSSLVKDGLKKGLFELPRDHHRE 188

Query: 126 LEAELKKMAPPNGRAVLVFRSRCGCPIGRMEVPGLKKIKKIK 1
           LEAELKKMAPPNGRAVLVFR+RCGC +GRMEVPG KK++K K
Sbjct: 189 LEAELKKMAPPNGRAVLVFRARCGCSVGRMEVPGPKKLRKFK 230


>gb|AFK36914.1| unknown [Lotus japonicus]
          Length = 247

 Score =  216 bits (551), Expect = 3e-54
 Identities = 112/209 (53%), Positives = 146/209 (69%), Gaps = 8/209 (3%)
 Frame = -2

Query: 618 MSNSLNLTD----SKQINQIQRNRKQPMSSKQPMKVPFCEQSRTGAIDVLYLIAVISAFG 451
           M+NS+  +D    S+Q N +QRNR+ P SS   +++P C++SR+  +DV+  IAV+ A G
Sbjct: 22  MANSICSSDFGSKSRQSNSLQRNRRGPSSSNS-LQIPPCDRSRSAMVDVVMFIAVVCACG 80

Query: 450 YLIFPSIKMFFNGIMDIGIAAFYMVKYEVCSAPLVYISIGFSLFFAMMAALVVFKCMDKK 271
           +L FP I+      + IG    ++VK EV  AP +YI+IG S+  A +A   V  C  +K
Sbjct: 81  FLFFPYIEFLITKSIQIGRVVLFLVKEEVAVAPSIYIAIGLSVLCAALATWGVVACTTRK 140

Query: 270 CGKPNCRGLSNAAEFDIQLETEDIVKNS--TTSDGG--VKGIFKLSQDHHRELEAELKKM 103
           CG PNC+GL  AAEFDIQLETED VKNS   + DGG   KG+F+L +DHHRELEAELKKM
Sbjct: 141 CGNPNCKGLKKAAEFDIQLETEDCVKNSPPLSKDGGDVKKGLFELPRDHHRELEAELKKM 200

Query: 102 APPNGRAVLVFRSRCGCPIGRMEVPGLKK 16
           APPNGRAVL+ R+RCGC +GR+EVPG KK
Sbjct: 201 APPNGRAVLILRARCGCSVGRLEVPGHKK 229


>ref|NP_001239718.1| uncharacterized protein LOC100818449 [Glycine max]
           gi|255642403|gb|ACU21465.1| unknown [Glycine max]
          Length = 243

 Score =  214 bits (546), Expect = 1e-53
 Identities = 114/233 (48%), Positives = 153/233 (65%), Gaps = 19/233 (8%)
 Frame = -2

Query: 648 ICVLMQMVYYMSNSLNLTD----SKQINQIQRNRKQPMSSKQP--MKVPFCEQSRTGAID 487
           +C  +     M+NS+   D    S+QIN +Q+NR+ P SS     +++P C++SR+  +D
Sbjct: 10  LCKSVDQSSSMANSICSADFGSKSRQINHLQKNRRTPSSSSSSNSLQIPPCDRSRSAMVD 69

Query: 486 VLYLIAVISAFGYLIFPSIKMFFNGIMDIGIAAFYMVKYEVCSAPLVYISIGFSLFFAMM 307
           V+  IAV+ A G+L FP ++       ++     +++K EV  AP +Y+SIG S+ FA +
Sbjct: 70  VVMFIAVVCACGFLFFPYVEFLVTKCYEVIKVVVFLIKEEVSVAPWIYVSIGLSVVFAAL 129

Query: 306 AALVVFKCMDKKCGKPNCRGLSNAAEFDIQLETEDIVKNSTTSD--------GGV-KGIF 154
           A   V  C  +KCG PNC+GL  AAEFDIQLETED VKNS +S         GGV KG+F
Sbjct: 130 ATWGVVACTTRKCGNPNCKGLRKAAEFDIQLETEDCVKNSASSSSNVAKDGAGGVKKGLF 189

Query: 153 KLSQDHHRELEAELKKMAPPNGRAVLVFRSRCGCPIGRMEVPG----LKKIKK 7
           +L +DHHRELEAELKKMAPPNGRAVLV R+RCGC +GR+EVPG    L+KI K
Sbjct: 190 ELPRDHHRELEAELKKMAPPNGRAVLVLRARCGCSVGRLEVPGPRKHLRKINK 242


>ref|XP_004148702.1| PREDICTED: uncharacterized protein LOC101215142 [Cucumis sativus]
           gi|449517213|ref|XP_004165640.1| PREDICTED:
           uncharacterized LOC101215142 [Cucumis sativus]
          Length = 225

 Score =  214 bits (545), Expect = 1e-53
 Identities = 116/220 (52%), Positives = 150/220 (68%), Gaps = 6/220 (2%)
 Frame = -2

Query: 648 ICVLMQMVYYMSNSLNLTDSKQINQIQRNRKQPMSSKQPMKVPFCEQSRTGAIDVLYLIA 469
           +C  +     M++S+NL DS   +   RN+K   SS    K P C +SR+  ID++ LIA
Sbjct: 10  VCKSVDQPTVMASSVNLADSSSKS---RNKKMTASSTCS-KFPVCHRSRSAVIDIVILIA 65

Query: 468 VISAFGYLIFPSIKMFFNGIMDIGIAAFYMVKYEVCSAPLVYISIGFSLFFAMMAALVVF 289
           V+ A G+L+FP +K+     ++I  A  Y++  EV  AP +Y SIG S+F A +AA VV 
Sbjct: 66  VVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLAAWVVL 125

Query: 288 KCMDKKCGKPNCRGLSNAAEFDIQLETEDIVKNST--TSDGGVKGIFKLSQDHHRELEAE 115
            C  +KCG P C+GL  AAEFDIQLETE+ VKNST    +G  KG+F+L +DHHRELEAE
Sbjct: 126 ICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHRELEAE 185

Query: 114 LKKMAPPNGRAVLVFRSRCGCPIGRMEVPG----LKKIKK 7
           LKKMAPPNGRAVL+FR+RCGC +GR+EVPG    LKKIKK
Sbjct: 186 LKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225


>ref|XP_002531853.1| 60S ribosomal protein L34, putative [Ricinus communis]
           gi|223528503|gb|EEF30531.1| 60S ribosomal protein L34,
           putative [Ricinus communis]
          Length = 235

 Score =  214 bits (545), Expect = 1e-53
 Identities = 111/213 (52%), Positives = 144/213 (67%), Gaps = 7/213 (3%)
 Frame = -2

Query: 618 MSNSLNLTDS----KQINQIQRNRKQPMSSKQPMKVPFCEQSRTGAIDVLYLIAVISAFG 451
           M+NS+N  +     K  N  Q  RK   +      +P C++SR+  +DV+ LIAVI+A G
Sbjct: 22  MANSVNSNELHPKLKNKNHGQNGRKMNNNHVNCSSIPVCDRSRSAVVDVVILIAVIAACG 81

Query: 450 YLIFPSIKMFFNGIMDIGIAAFYMVKYEVCSAPLVYISIGFSLFFAMMAALVVFKCMDKK 271
           +L+FP IK+    ++        +VK E+  +P++Y SIG   F A +A  +VF C  +K
Sbjct: 82  FLLFPYIKVVTFCLIKFVTVMHSLVKEEILRSPMIYASIGVGTFCAAIAVWIVFTCTTRK 141

Query: 270 CGKPNCRGLSNAAEFDIQLETEDIVKNSTTS---DGGVKGIFKLSQDHHRELEAELKKMA 100
           CG PNC+GL  AAEFDIQLETE+ VKNS  S   DG  +G+F+L +DHHRELEAELKKMA
Sbjct: 142 CGNPNCKGLRKAAEFDIQLETEECVKNSNGSLVKDGVKRGLFELPRDHHRELEAELKKMA 201

Query: 99  PPNGRAVLVFRSRCGCPIGRMEVPGLKKIKKIK 1
           PPNGRAVLVFR+RCGC +GR+EVPG KK KKIK
Sbjct: 202 PPNGRAVLVFRARCGCSVGRLEVPGTKKQKKIK 234


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