BLASTX nr result

ID: Coptis25_contig00009865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009865
         (1254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277244.1| PREDICTED: histidine biosynthesis bifunction...   363   5e-98
ref|NP_001240208.1| uncharacterized protein LOC100807276 [Glycin...   347   4e-93
ref|XP_002330733.1| predicted protein [Populus trichocarpa] gi|2...   346   8e-93
ref|XP_002443519.1| hypothetical protein SORBIDRAFT_08g020870 [S...   344   3e-92
ref|XP_002457646.1| hypothetical protein SORBIDRAFT_03g011110 [S...   340   4e-91

>ref|XP_002277244.1| PREDICTED: histidine biosynthesis bifunctional protein hisIE,
           chloroplastic [Vitis vinifera]
           gi|296082253|emb|CBI21258.3| unnamed protein product
           [Vitis vinifera]
          Length = 289

 Score =  363 bits (932), Expect = 5e-98
 Identities = 184/233 (78%), Positives = 204/233 (87%), Gaps = 1/233 (0%)
 Frame = +3

Query: 57  VELLLDSIKWDNKGLAVAIAQNVDTGAILMQGFANREALAATISTHKATFYSRSRSSLWT 236
           VE LLDS+KWD+KGLAVAIAQNVDTGA+LMQGF NR+ALA TIS+ KATFYSRSRS LWT
Sbjct: 57  VETLLDSVKWDDKGLAVAIAQNVDTGAVLMQGFVNRDALATTISSQKATFYSRSRSKLWT 116

Query: 237 KGETSKNFINVIDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYVSVNDYLKGSEVKE-NT 413
           KGETS NFIN+ DIFLDCDRDSIIYLGKPDGPTCHTGSETCYY SV D LK  + +E N 
Sbjct: 117 KGETSLNFINIHDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYSSVFDLLKNPQGEENNN 176

Query: 414 LALTTLYSLESTISQRQAELGAIENGKPSWTKRLLLDQKLLCSKIREEADELCRTLEENK 593
           LALT LYSLESTISQR+AE+ + +NGKPSWTKRLLLD KLLCSKIREEADELCRT EEN+
Sbjct: 177 LALTALYSLESTISQRKAEVASPQNGKPSWTKRLLLDDKLLCSKIREEADELCRTHEENE 236

Query: 594 NKSRAAAEAADVLFHSMVLLKNKDVTLEEVLQVLRQRFSRSGIEEKNSRS*HG 752
           +KSR A+E ADVL+H+MVLL  KDV +EEVLQVLR RFS+SGIEEK SR+  G
Sbjct: 237 DKSRTASEMADVLYHTMVLLSLKDVKMEEVLQVLRHRFSQSGIEEKKSRATQG 289


>ref|NP_001240208.1| uncharacterized protein LOC100807276 [Glycine max]
           gi|255641260|gb|ACU20907.1| unknown [Glycine max]
          Length = 281

 Score =  347 bits (890), Expect = 4e-93
 Identities = 174/228 (76%), Positives = 198/228 (86%)
 Frame = +3

Query: 57  VELLLDSIKWDNKGLAVAIAQNVDTGAILMQGFANREALAATISTHKATFYSRSRSSLWT 236
           V+ LLDS+KWD KGL VAIAQNVDTGAILMQGFANREA+A TIS+ KATFYSRSRS+LWT
Sbjct: 47  VDSLLDSVKWDTKGLVVAIAQNVDTGAILMQGFANREAIATTISSRKATFYSRSRSTLWT 106

Query: 237 KGETSKNFINVIDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYVSVNDYLKGSEVKENTL 416
           KGETS NFINV D+F+DCDRDSIIYLGKPDGPTCHTG+ETCYY SV D LK  E +EN L
Sbjct: 107 KGETSNNFINVHDVFIDCDRDSIIYLGKPDGPTCHTGAETCYYTSVFDLLKQQEAEENKL 166

Query: 417 ALTTLYSLESTISQRQAELGAIENGKPSWTKRLLLDQKLLCSKIREEADELCRTLEENKN 596
           ALT+LY+LESTISQR+ EL   EN KPSWTKRLLL+ KLLCSKIREEA+ELC+TLE N++
Sbjct: 167 ALTSLYALESTISQRKTELIG-ENEKPSWTKRLLLNDKLLCSKIREEANELCQTLENNED 225

Query: 597 KSRAAAEAADVLFHSMVLLKNKDVTLEEVLQVLRQRFSRSGIEEKNSR 740
           + R A+E ADVL+H+MVLL  K V +E+VLQVLR RFS+SGIEEK SR
Sbjct: 226 EKRTASEMADVLYHAMVLLAKKGVKIEDVLQVLRLRFSQSGIEEKKSR 273


>ref|XP_002330733.1| predicted protein [Populus trichocarpa] gi|222872509|gb|EEF09640.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  346 bits (887), Expect = 8e-93
 Identities = 170/228 (74%), Positives = 196/228 (85%)
 Frame = +3

Query: 57  VELLLDSIKWDNKGLAVAIAQNVDTGAILMQGFANREALAATISTHKATFYSRSRSSLWT 236
           VE LLDS+KWD+KGLAV IAQN+DTGA+LMQGF N +ALA TIS+ KATFYSRSRS+LWT
Sbjct: 58  VETLLDSVKWDDKGLAVGIAQNIDTGAVLMQGFVNSDALATTISSQKATFYSRSRSALWT 117

Query: 237 KGETSKNFINVIDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYVSVNDYLKGSEVKENTL 416
           KGETSKNFINV DI+LDCDRDSIIYLGKPDGPTCHTGSETCYY SV D L+  +V  N L
Sbjct: 118 KGETSKNFINVHDIYLDCDRDSIIYLGKPDGPTCHTGSETCYYTSVPDLLENKQVDGNKL 177

Query: 417 ALTTLYSLESTISQRQAELGAIENGKPSWTKRLLLDQKLLCSKIREEADELCRTLEENKN 596
           ALTTLYSLE+ ISQR+AEL   + GKPSWTKRLLLD  LLC+KIREEADELCRTLE+N++
Sbjct: 178 ALTTLYSLETIISQRKAELALPQTGKPSWTKRLLLDHDLLCTKIREEADELCRTLEDNED 237

Query: 597 KSRAAAEAADVLFHSMVLLKNKDVTLEEVLQVLRQRFSRSGIEEKNSR 740
           ++R A E  DVL+H+MVL+  K V +EEVL+VLR+RF +SGIEEK SR
Sbjct: 238 QARTADEMGDVLYHAMVLMAVKGVKIEEVLEVLRKRFFQSGIEEKRSR 285


>ref|XP_002443519.1| hypothetical protein SORBIDRAFT_08g020870 [Sorghum bicolor]
           gi|241944212|gb|EES17357.1| hypothetical protein
           SORBIDRAFT_08g020870 [Sorghum bicolor]
          Length = 306

 Score =  344 bits (882), Expect = 3e-92
 Identities = 173/229 (75%), Positives = 200/229 (87%)
 Frame = +3

Query: 57  VELLLDSIKWDNKGLAVAIAQNVDTGAILMQGFANREALAATISTHKATFYSRSRSSLWT 236
           V++LLDS+KWD+KGLAVAIAQNVDTGAILMQGFAN+EALA TIST KATF+SRSRSSLWT
Sbjct: 76  VDVLLDSVKWDSKGLAVAIAQNVDTGAILMQGFANKEALAKTISTRKATFFSRSRSSLWT 135

Query: 237 KGETSKNFINVIDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYVSVNDYLKGSEVKENTL 416
           KGETS NFINV DIFLDCDRDSIIYLGKPDGPTCHTG+ETCYY SV D L+ S+  E   
Sbjct: 136 KGETSMNFINVHDIFLDCDRDSIIYLGKPDGPTCHTGAETCYYTSVYDALQSSKPNEGRQ 195

Query: 417 ALTTLYSLESTISQRQAELGAIENGKPSWTKRLLLDQKLLCSKIREEADELCRTLEENKN 596
            +TTLYSLE TIS+RQ E+     GKPSWTK+LLLD +LLCSKIREEA EL +TL EN++
Sbjct: 196 VVTTLYSLEDTISRRQEEIVTEGGGKPSWTKKLLLDNQLLCSKIREEAGELIQTLLENED 255

Query: 597 KSRAAAEAADVLFHSMVLLKNKDVTLEEVLQVLRQRFSRSGIEEKNSRS 743
           +SRAA+E AD+L+H+MVLL+ KDV +EEVL+VLR+RFS+SGIEEK SRS
Sbjct: 256 QSRAASEMADLLYHAMVLLRVKDVKMEEVLEVLRKRFSQSGIEEKASRS 304


>ref|XP_002457646.1| hypothetical protein SORBIDRAFT_03g011110 [Sorghum bicolor]
           gi|241929621|gb|EES02766.1| hypothetical protein
           SORBIDRAFT_03g011110 [Sorghum bicolor]
          Length = 297

 Score =  340 bits (872), Expect = 4e-91
 Identities = 170/229 (74%), Positives = 198/229 (86%)
 Frame = +3

Query: 57  VELLLDSIKWDNKGLAVAIAQNVDTGAILMQGFANREALAATISTHKATFYSRSRSSLWT 236
           V+ LLDS+KWD+KGLAVAIAQNVDTGAILMQGFAN+EALA TIST KATF+SRSRSSLWT
Sbjct: 67  VDTLLDSVKWDSKGLAVAIAQNVDTGAILMQGFANKEALAKTISTRKATFFSRSRSSLWT 126

Query: 237 KGETSKNFINVIDIFLDCDRDSIIYLGKPDGPTCHTGSETCYYVSVNDYLKGSEVKENTL 416
           KGETS NFINV DIFLDCD DSIIYLGKPDGPTCHTG+ETCYY SV D L+ S+  E   
Sbjct: 127 KGETSMNFINVHDIFLDCDHDSIIYLGKPDGPTCHTGAETCYYTSVYDALQSSKPNEGRQ 186

Query: 417 ALTTLYSLESTISQRQAELGAIENGKPSWTKRLLLDQKLLCSKIREEADELCRTLEENKN 596
            +TTLYSLE TIS+RQ E+     GKPSWTK+LLLD +LLCSKIREEA EL +TL EN++
Sbjct: 187 VMTTLYSLEDTISRRQEEIVTEGGGKPSWTKKLLLDNQLLCSKIREEAGELIQTLLENED 246

Query: 597 KSRAAAEAADVLFHSMVLLKNKDVTLEEVLQVLRQRFSRSGIEEKNSRS 743
           +SRAA+E AD+L+H+MVLL+ KDV +EEVL++LR+RFS+SGIEEK SR+
Sbjct: 247 QSRAASEMADLLYHAMVLLRVKDVKMEEVLEILRKRFSQSGIEEKASRN 295


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