BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009853
         (1348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134699.1| PREDICTED: 30S ribosomal protein S5, chlorop...   356   9e-96
ref|XP_002305129.1| predicted protein [Populus trichocarpa] gi|1...   352   1e-94
ref|XP_002509457.1| 30S ribosomal protein S5, putative [Ricinus ...   350   6e-94
ref|XP_003542738.1| PREDICTED: 30S ribosomal protein S5, chlorop...   345   1e-92
ref|XP_003529335.1| PREDICTED: 30S ribosomal protein S5, chlorop...   345   1e-92

>ref|XP_004134699.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Cucumis
            sativus] gi|449479289|ref|XP_004155560.1| PREDICTED: 30S
            ribosomal protein S5, chloroplastic-like [Cucumis
            sativus]
          Length = 307

 Score =  356 bits (913), Expect = 9e-96
 Identities = 176/253 (69%), Positives = 197/253 (77%)
 Frame = +1

Query: 265  KANSNDIDTTFFDEVNPEEEIVFDPPTIPEGYIPPTPFDEGPVETEDEIAAAYEELYGPA 444
            +A S+DIDTTFFD VNP+E+IV+DPP +PEG++PP  FDEGP+ETE+EIAA YEE+YGPA
Sbjct: 55   RAKSSDIDTTFFDNVNPQEDIVYDPPEVPEGFVPPPSFDEGPIETEEEIAAGYEEIYGPA 114

Query: 445  YSGVSVLGNDVYVMDAKIKKQTGFGSKTKKEKVRDGFDEXXXXXXXXXXXXXXXXXLHFR 624
            YSGVSVLGND+YVMD+K+KK  GFGSK KK+K RDGFDE                 LHFR
Sbjct: 115  YSGVSVLGNDIYVMDSKVKKAGGFGSKAKKDKPRDGFDERVVQVRRVTKVVKGGKQLHFR 174

Query: 625  XXXXXXXXXXXXXXXXXXXXXXXXXXQKSAVNARRNIITVPMTKYATFPHRADGDYGAAK 804
                                      QKSAVNARRNI+TVPMTKY TFPHR++GDYGAAK
Sbjct: 175  AIVVVGDKQGQVGVGVGKAKEVITAVQKSAVNARRNIVTVPMTKYLTFPHRSEGDYGAAK 234

Query: 805  VMLRPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQSMRQFSDV 984
            VMLRPASPGTGVIAGG+VRIVLEMAGVENALGKQLGSNNALNNARATVVAVQ M+QF DV
Sbjct: 235  VMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFRDV 294

Query: 985  ARERGIPMEELWK 1023
            A+ERGIPMEELWK
Sbjct: 295  AQERGIPMEELWK 307


>ref|XP_002305129.1| predicted protein [Populus trichocarpa] gi|118487850|gb|ABK95748.1|
            unknown [Populus trichocarpa] gi|222848093|gb|EEE85640.1|
            predicted protein [Populus trichocarpa]
          Length = 311

 Score =  352 bits (903), Expect = 1e-94
 Identities = 177/253 (69%), Positives = 197/253 (77%)
 Frame = +1

Query: 265  KANSNDIDTTFFDEVNPEEEIVFDPPTIPEGYIPPTPFDEGPVETEDEIAAAYEELYGPA 444
            KANS+DIDT+FFD +NPEEE V+DPPT PE YIPP  FDEGP+ETE+EIAAAYEELYGPA
Sbjct: 59   KANSSDIDTSFFDNLNPEEEFVYDPPTPPEDYIPPPSFDEGPIETEEEIAAAYEELYGPA 118

Query: 445  YSGVSVLGNDVYVMDAKIKKQTGFGSKTKKEKVRDGFDEXXXXXXXXXXXXXXXXXLHFR 624
            YSGVSVLG D+YVMD+K+KK +G+GS+ KKEK++DGFDE                 LHFR
Sbjct: 119  YSGVSVLGKDIYVMDSKVKKTSGWGSRVKKEKIKDGFDERVVQVRRVTKVVKGGKQLHFR 178

Query: 625  XXXXXXXXXXXXXXXXXXXXXXXXXXQKSAVNARRNIITVPMTKYATFPHRADGDYGAAK 804
                                      QKSA+NARRNIITVPMTKY TFPHR++GD+GAAK
Sbjct: 179  AVVIVGDKQGRVGVGVGKAKEVIVAVQKSALNARRNIITVPMTKYLTFPHRSEGDFGAAK 238

Query: 805  VMLRPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQSMRQFSDV 984
            VMLRPASPGTGVIAGG+VRIVLEMAGVENALGKQL S NALNNARATVVAVQ MRQFS+V
Sbjct: 239  VMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLRSKNALNNARATVVAVQKMRQFSEV 298

Query: 985  ARERGIPMEELWK 1023
            ARERGIPMEELWK
Sbjct: 299  ARERGIPMEELWK 311


>ref|XP_002509457.1| 30S ribosomal protein S5, putative [Ricinus communis]
            gi|223549356|gb|EEF50844.1| 30S ribosomal protein S5,
            putative [Ricinus communis]
          Length = 309

 Score =  350 bits (897), Expect = 6e-94
 Identities = 177/252 (70%), Positives = 195/252 (77%)
 Frame = +1

Query: 268  ANSNDIDTTFFDEVNPEEEIVFDPPTIPEGYIPPTPFDEGPVETEDEIAAAYEELYGPAY 447
            A+S+DIDTTFFD +NPE++IVFDPPT PE ++PP  FDE P+ETE+EIAAAYE+LYG  Y
Sbjct: 58   ASSSDIDTTFFDNLNPEDDIVFDPPTPPEDFVPPPSFDEEPMETEEEIAAAYEDLYGAGY 117

Query: 448  SGVSVLGNDVYVMDAKIKKQTGFGSKTKKEKVRDGFDEXXXXXXXXXXXXXXXXXLHFRX 627
            SGVS LGNDVYVMD+K+KK TGFGSK K+EK+RDGF+E                 LHFR 
Sbjct: 118  SGVSYLGNDVYVMDSKVKKTTGFGSKGKREKIRDGFEERVVQVRRVTKVVKGGKQLHFRA 177

Query: 628  XXXXXXXXXXXXXXXXXXXXXXXXXQKSAVNARRNIITVPMTKYATFPHRADGDYGAAKV 807
                                     QKSAVNARRNIITVPMTKY TFPHR+DGDYGAAKV
Sbjct: 178  IVVVGDKQGQVGVGVGKAKEVIAAVQKSAVNARRNIITVPMTKYLTFPHRSDGDYGAAKV 237

Query: 808  MLRPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQSMRQFSDVA 987
            MLRPASPGTGVIAGG+VRIVLEMAGVENALGKQ+GS NALNNARATVVAVQ MRQFSDVA
Sbjct: 238  MLRPASPGTGVIAGGAVRIVLEMAGVENALGKQIGSKNALNNARATVVAVQKMRQFSDVA 297

Query: 988  RERGIPMEELWK 1023
            RERGIPMEELWK
Sbjct: 298  RERGIPMEELWK 309


>ref|XP_003542738.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Glycine max]
          Length = 316

 Score =  345 bits (886), Expect = 1e-92
 Identities = 177/265 (66%), Positives = 198/265 (74%), Gaps = 5/265 (1%)
 Frame = +1

Query: 244  NKPNKPL-----KANSNDIDTTFFDEVNPEEEIVFDPPTIPEGYIPPTPFDEGPVETEDE 408
            ++P+KPL        S+DIDT+FFD +NP+++I F+PP  PEG++ P  FD+GP+ETEDE
Sbjct: 52   HQPSKPLFLTLKSKPSDDIDTSFFDNINPQDDITFNPPEPPEGFVAPPSFDDGPLETEDE 111

Query: 409  IAAAYEELYGPAYSGVSVLGNDVYVMDAKIKKQTGFGSKTKKEKVRDGFDEXXXXXXXXX 588
            IAAAYEELYGP YSGVSVLGNDVYVMDAK+KK+TGFGS  KKEKVRDGF+E         
Sbjct: 112  IAAAYEELYGPGYSGVSVLGNDVYVMDAKVKKETGFGSGAKKEKVRDGFEERVVQVRRVT 171

Query: 589  XXXXXXXXLHFRXXXXXXXXXXXXXXXXXXXXXXXXXXQKSAVNARRNIITVPMTKYATF 768
                    L FR                          QKSAVNARRNII VPMTKY+TF
Sbjct: 172  KVVKGGKQLRFRAVVVVGDKKGQVGVGVGKAKEVIAAVQKSAVNARRNIIKVPMTKYSTF 231

Query: 769  PHRADGDYGAAKVMLRPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATV 948
            PHRADGDYGAAKVMLRPASPGTGVIAGGSVRIVLEMAGV+NALGKQLGSNNALNNARATV
Sbjct: 232  PHRADGDYGAAKVMLRPASPGTGVIAGGSVRIVLEMAGVDNALGKQLGSNNALNNARATV 291

Query: 949  VAVQSMRQFSDVARERGIPMEELWK 1023
             AVQ M+QF +VA ERGIPMEELWK
Sbjct: 292  AAVQKMKQFREVAEERGIPMEELWK 316


>ref|XP_003529335.1| PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Glycine max]
          Length = 300

 Score =  345 bits (886), Expect = 1e-92
 Identities = 175/250 (70%), Positives = 192/250 (76%)
 Frame = +1

Query: 274  SNDIDTTFFDEVNPEEEIVFDPPTIPEGYIPPTPFDEGPVETEDEIAAAYEELYGPAYSG 453
            S+DIDT+FFD +NP+++I F+PP  PEG++ P  FD+GP+ETEDEIAAAYEELYGP YSG
Sbjct: 51   SDDIDTSFFDNINPQDDITFNPPEPPEGFVAPPSFDDGPLETEDEIAAAYEELYGPGYSG 110

Query: 454  VSVLGNDVYVMDAKIKKQTGFGSKTKKEKVRDGFDEXXXXXXXXXXXXXXXXXLHFRXXX 633
            VSVLGNDVYVMDAK+KK+TGFGS  KKEKVRDGF+E                 L FR   
Sbjct: 111  VSVLGNDVYVMDAKVKKETGFGSGAKKEKVRDGFEERVVQVRRVTKVVKGGKQLRFRAVV 170

Query: 634  XXXXXXXXXXXXXXXXXXXXXXXQKSAVNARRNIITVPMTKYATFPHRADGDYGAAKVML 813
                                   QKSAVNARRNII VPMTKY+TFPHRADGDYGAAKVML
Sbjct: 171  VVGDKKGSVGVGVGKAKEVIAAVQKSAVNARRNIIKVPMTKYSTFPHRADGDYGAAKVML 230

Query: 814  RPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQSMRQFSDVARE 993
            RPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQ M+QF +VA E
Sbjct: 231  RPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQFREVAEE 290

Query: 994  RGIPMEELWK 1023
            RGIPMEELWK
Sbjct: 291  RGIPMEELWK 300