BLASTX nr result

ID: Coptis25_contig00009838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009838
         (1850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE80323.1| cyclin dependent kinase A [Camellia sinensis]          62   2e-26
gb|ABD14373.1| cyclin-dependent kinase type A [Prunus dulcis]          62   2e-26
dbj|BAE06268.1| cyclin-dependent kinase A1 [Scutellaria baicalen...    59   3e-26
ref|XP_002530830.1| cdk1, putative [Ricinus communis] gi|2235295...    61   3e-26
sp|P93101.1|CDC2_CHERU RecName: Full=Cell division control prote...    58   6e-26

>dbj|BAE80323.1| cyclin dependent kinase A [Camellia sinensis]
          Length = 294

 Score = 61.6 bits (148), Expect(3) = 2e-26
 Identities = 30/69 (43%), Positives = 39/69 (56%)
 Frame = -1

Query: 1295 LMGSPTEASWLGVIRWRYYPSYLRHFDGKVLLDTFPTLGEVGVDLLSRMLCLNPGNRITA 1116
            ++G+P E +W GV     + S    +  K L    P L   G+DLLS+MLCL+P  RITA
Sbjct: 219  ILGTPNEDTWPGVTSLADFKSAFPKWPSKDLATVVPNLDSAGIDLLSKMLCLDPSRRITA 278

Query: 1115 VEALNHPYF 1089
              AL H YF
Sbjct: 279  RSALEHEYF 287



 Score = 54.3 bits (129), Expect(3) = 2e-26
 Identities = 26/60 (43%), Positives = 37/60 (61%)
 Frame = -3

Query: 1476 IMISPLTMKVGTGAYKAPELLLGAVDYGTPADIWALGCIFGEMANWNCLPIFVKNDRAEE 1297
            I +   T +V T  Y+APE+LLG+  Y TP D+W++GCIF EM N    P+F  +   +E
Sbjct: 155  IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR--PLFPGDSEIDE 212



 Score = 52.0 bits (123), Expect(3) = 2e-26
 Identities = 29/91 (31%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
 Frame = -2

Query: 1774 EDVFVEEDFLCFVTELMNMNLTAYIMKFEIECPD------MVKVFMKQLLAGLAHIHDQR 1613
            +DV   E  L  V E ++++L  ++      CP+      ++K+F+ Q+L G+A+ H  R
Sbjct: 67   QDVVHSEKRLYLVFEYLDLDLKKHMDS----CPEFSKDPRLIKMFLYQILRGIAYCHSHR 122

Query: 1612 GMHRNIKASNILVDTDSTPHRVKIADFGSAK 1520
             +HR++K  N+L+D  +  + +K+ADFG A+
Sbjct: 123  VLHRDLKPQNLLIDRRT--NALKLADFGLAR 151


>gb|ABD14373.1| cyclin-dependent kinase type A [Prunus dulcis]
          Length = 294

 Score = 62.0 bits (149), Expect(3) = 2e-26
 Identities = 33/69 (47%), Positives = 40/69 (57%)
 Frame = -1

Query: 1295 LMGSPTEASWLGVIRWRYYPSYLRHFDGKVLLDTFPTLGEVGVDLLSRMLCLNPGNRITA 1116
            +MG+PTE +W GV     + S    +  K L    P L   GVDLLS+MLCL+P  RITA
Sbjct: 219  IMGTPTEDTWPGVNSLPDFKSSFPKWLAKDLATAVPNLESAGVDLLSKMLCLDPSKRITA 278

Query: 1115 VEALNHPYF 1089
              AL H YF
Sbjct: 279  RTALEHEYF 287



 Score = 54.3 bits (129), Expect(3) = 2e-26
 Identities = 26/60 (43%), Positives = 37/60 (61%)
 Frame = -3

Query: 1476 IMISPLTMKVGTGAYKAPELLLGAVDYGTPADIWALGCIFGEMANWNCLPIFVKNDRAEE 1297
            I +   T +V T  Y+APE+LLG+  Y TP D+W++GCIF EM N    P+F  +   +E
Sbjct: 155  IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR--PLFPGDSEIDE 212



 Score = 51.2 bits (121), Expect(3) = 2e-26
 Identities = 28/87 (32%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
 Frame = -2

Query: 1774 EDVFVEEDFLCFVTELMNMNLTAYIMKFE--IECPDMVKVFMKQLLAGLAHIHDQRGMHR 1601
            +DV   E  L  V E ++++L  ++       + P  +K+F+ Q+L G+A+ H  R +HR
Sbjct: 67   QDVVHSEKRLYLVFEYLDLDLKKHMDSTPEFAKDPRQIKMFLYQILRGIAYCHSHRVLHR 126

Query: 1600 NIKASNILVDTDSTPHRVKIADFGSAK 1520
            ++K  N+L+D  +  + +K+ADFG A+
Sbjct: 127  DLKPQNLLIDRRT--NSLKLADFGLAR 151


>dbj|BAE06268.1| cyclin-dependent kinase A1 [Scutellaria baicalensis]
          Length = 294

 Score = 59.3 bits (142), Expect(3) = 3e-26
 Identities = 30/69 (43%), Positives = 38/69 (55%)
 Frame = -1

Query: 1295 LMGSPTEASWLGVIRWRYYPSYLRHFDGKVLLDTFPTLGEVGVDLLSRMLCLNPGNRITA 1116
            +MG+P E +W GV     + S    +  K L    P L   G+DLL +MLCL+P  RITA
Sbjct: 219  IMGTPNEDTWPGVTSLPDFKSAFPKWPSKELATVVPNLDAPGLDLLGKMLCLDPSKRITA 278

Query: 1115 VEALNHPYF 1089
              AL H YF
Sbjct: 279  RHALEHDYF 287



 Score = 54.3 bits (129), Expect(3) = 3e-26
 Identities = 26/60 (43%), Positives = 37/60 (61%)
 Frame = -3

Query: 1476 IMISPLTMKVGTGAYKAPELLLGAVDYGTPADIWALGCIFGEMANWNCLPIFVKNDRAEE 1297
            I +   T +V T  Y+APE+LLG+  Y TP D+W++GCIF EM N    P+F  +   +E
Sbjct: 155  IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQR--PLFPGDSEIDE 212



 Score = 53.5 bits (127), Expect(3) = 3e-26
 Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
 Frame = -2

Query: 1774 EDVFVEEDFLCFVTELMNMNLTAYIMKFEIECPD------MVKVFMKQLLAGLAHIHDQR 1613
            +DV   E  L  V E ++++L  ++      CP+      +VK F+ Q+L G+A+ H  R
Sbjct: 67   QDVIHSEKRLYLVFEFLDLDLKKHMDS----CPEFSKDPRLVKTFLNQILRGIAYCHSHR 122

Query: 1612 GMHRNIKASNILVDTDSTPHRVKIADFGSAK 1520
             +HR++K  N+L+D  +  + +K+ADFG A+
Sbjct: 123  VLHRDLKPQNLLIDRRT--NALKLADFGLAR 151


>ref|XP_002530830.1| cdk1, putative [Ricinus communis] gi|223529594|gb|EEF31543.1| cdk1,
            putative [Ricinus communis]
          Length = 237

 Score = 60.8 bits (146), Expect(3) = 3e-26
 Identities = 31/69 (44%), Positives = 39/69 (56%)
 Frame = -1

Query: 1295 LMGSPTEASWLGVIRWRYYPSYLRHFDGKVLLDTFPTLGEVGVDLLSRMLCLNPGNRITA 1116
            ++G+P E +W GV     + S    +  K L    PTL   GVDLL +MLCL+P  RITA
Sbjct: 162  ILGTPNEDTWPGVTSLPDFKSAFPKWPPKDLASVVPTLESAGVDLLCKMLCLDPSKRITA 221

Query: 1115 VEALNHPYF 1089
              AL H YF
Sbjct: 222  RSALEHEYF 230



 Score = 54.3 bits (129), Expect(3) = 3e-26
 Identities = 26/60 (43%), Positives = 37/60 (61%)
 Frame = -3

Query: 1476 IMISPLTMKVGTGAYKAPELLLGAVDYGTPADIWALGCIFGEMANWNCLPIFVKNDRAEE 1297
            I +   T +V T  Y+APE+LLG+  Y TP D+W++GCIF EM N    P+F  +   +E
Sbjct: 98   IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFSEMVNQR--PLFPGDSEIDE 155



 Score = 52.0 bits (123), Expect(3) = 3e-26
 Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
 Frame = -2

Query: 1774 EDVFVEEDFLCFVTELMNMNLTAYIMKFE--IECPDMVKVFMKQLLAGLAHIHDQRGMHR 1601
            +DV   E  L  V E ++++L  ++       + P +VK F+ Q+L G+A+ H  R +HR
Sbjct: 10   QDVVHSEKRLYLVFEYLDLDLKKHMDSCPEFAKDPRLVKTFLYQILRGIAYCHSHRVLHR 69

Query: 1600 NIKASNILVDTDSTPHRVKIADFGSAK 1520
            ++K  N+L+D  +  + +K+ADFG A+
Sbjct: 70   DLKPQNLLIDRRT--NALKLADFGLAR 94


>sp|P93101.1|CDC2_CHERU RecName: Full=Cell division control protein 2 homolog; AltName:
            Full=p34cdc2 gi|1770186|emb|CAA71242.1| cyclin dependent
            kinase p34 [Chenopodium rubrum]
          Length = 294

 Score = 57.8 bits (138), Expect(3) = 6e-26
 Identities = 29/68 (42%), Positives = 38/68 (55%)
 Frame = -1

Query: 1292 MGSPTEASWLGVIRWRYYPSYLRHFDGKVLLDTFPTLGEVGVDLLSRMLCLNPGNRITAV 1113
            +G+P E +W GV     + S    +  K L    P L   G+DLL++MLCL+P  RITA 
Sbjct: 220  LGTPNEETWPGVTSLPDFKSSFPKWISKDLSAVVPNLDPAGIDLLNKMLCLDPSKRITAR 279

Query: 1112 EALNHPYF 1089
             AL H YF
Sbjct: 280  NALEHEYF 287



 Score = 54.3 bits (129), Expect(3) = 6e-26
 Identities = 26/60 (43%), Positives = 37/60 (61%)
 Frame = -3

Query: 1476 IMISPLTMKVGTGAYKAPELLLGAVDYGTPADIWALGCIFGEMANWNCLPIFVKNDRAEE 1297
            I +   T +V T  Y+APE+LLG+  Y TP D+W++GCIF EM N    P+F  +   +E
Sbjct: 155  IPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQK--PLFPGDSEIDE 212



 Score = 53.9 bits (128), Expect(3) = 6e-26
 Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
 Frame = -2

Query: 1774 EDVFVEEDFLCFVTELMNMNLTAYIMKFEIECPD------MVKVFMKQLLAGLAHIHDQR 1613
            +DV   E  L  V E ++++L  ++      CPD      M+K F+ Q+L G+A+ H  R
Sbjct: 67   QDVVHSEKRLYLVFEYLDLDLKKHMDS----CPDFAKDPRMIKRFLYQILRGIAYCHSHR 122

Query: 1612 GMHRNIKASNILVDTDSTPHRVKIADFGSAK 1520
             +HR++K  N+L+D  +  + +K+ADFG A+
Sbjct: 123  VLHRDLKPQNLLIDRQT--NALKLADFGLAR 151


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