BLASTX nr result

ID: Coptis25_contig00009824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009824
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277414.1| PREDICTED: uncharacterized protein LOC100252...    94   2e-36
emb|CBI40800.3| unnamed protein product [Vitis vinifera]               94   1e-35
ref|XP_003607891.1| hypothetical protein MTR_4g084120 [Medicago ...    89   5e-35
ref|XP_003529426.1| PREDICTED: UPF0047 protein yjbQ-like [Glycin...    93   9e-35
ref|XP_002301884.1| predicted protein [Populus trichocarpa] gi|2...    96   1e-33

>ref|XP_002277414.1| PREDICTED: uncharacterized protein LOC100252976 isoform 1 [Vitis
           vinifera]
          Length = 236

 Score = 94.4 bits (233), Expect(2) = 2e-36
 Identities = 42/44 (95%), Positives = 44/44 (100%)
 Frame = -3

Query: 134 VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTL 3
           VRDDTETFL+KIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGC+L
Sbjct: 155 VRDDTETFLSKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCSL 198



 Score = 84.7 bits (208), Expect(2) = 2e-36
 Identities = 46/73 (63%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
 Frame = -1

Query: 436 IRVKS-----QLNSTTDQNKRRGLMEGAPNNKWAQKTISLSPQQRGCHLITPKILKEIEQ 272
           IRVKS       N  TD       M   P  KWAQKTI+L PQ+RGCH ITPKILKEI Q
Sbjct: 69  IRVKSLYTPTSFNDPTDSTS----MAAIPAPKWAQKTITLPPQRRGCHHITPKILKEIGQ 124

Query: 271 DLSGFKCGLAHFF 233
           DLSGFKCGLAH F
Sbjct: 125 DLSGFKCGLAHLF 137


>emb|CBI40800.3| unnamed protein product [Vitis vinifera]
          Length = 148

 Score = 94.4 bits (233), Expect(2) = 1e-35
 Identities = 42/44 (95%), Positives = 44/44 (100%)
 Frame = -3

Query: 134 VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTL 3
           VRDDTETFL+KIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGC+L
Sbjct: 67  VRDDTETFLSKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCSL 110



 Score = 82.0 bits (201), Expect(2) = 1e-35
 Identities = 38/49 (77%), Positives = 40/49 (81%)
 Frame = -1

Query: 379 MEGAPNNKWAQKTISLSPQQRGCHLITPKILKEIEQDLSGFKCGLAHFF 233
           M   P  KWAQKTI+L PQ+RGCH ITPKILKEI QDLSGFKCGLAH F
Sbjct: 1   MAAIPAPKWAQKTITLPPQRRGCHHITPKILKEIGQDLSGFKCGLAHLF 49


>ref|XP_003607891.1| hypothetical protein MTR_4g084120 [Medicago truncatula]
           gi|85719357|gb|ABC75362.1| Protein of unknown function
           UPF0047 [Medicago truncatula]
           gi|355508946|gb|AES90088.1| hypothetical protein
           MTR_4g084120 [Medicago truncatula]
          Length = 173

 Score = 88.6 bits (218), Expect(2) = 5e-35
 Identities = 40/44 (90%), Positives = 41/44 (93%)
 Frame = -3

Query: 134 VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTL 3
           VRDDTETFLN+IVPEG SAPWKHTLEG DDMPAHIKSSMFGC L
Sbjct: 92  VRDDTETFLNRIVPEGPSAPWKHTLEGHDDMPAHIKSSMFGCAL 135



 Score = 85.5 bits (210), Expect(2) = 5e-35
 Identities = 44/69 (63%), Positives = 50/69 (72%)
 Frame = -1

Query: 439 PIRVKSQLNSTTDQNKRRGLMEGAPNNKWAQKTISLSPQQRGCHLITPKILKEIEQDLSG 260
           P+ VK+QL +   Q      M  AP  KWAQKTI+L P +RGCHL+TPKI KEIEQDLSG
Sbjct: 12  PLSVKAQLPTLKTQES----MATAP--KWAQKTIALPPYKRGCHLVTPKIAKEIEQDLSG 65

Query: 259 FKCGLAHFF 233
           FKCGLAH F
Sbjct: 66  FKCGLAHLF 74


>ref|XP_003529426.1| PREDICTED: UPF0047 protein yjbQ-like [Glycine max]
          Length = 175

 Score = 92.8 bits (229), Expect(2) = 9e-35
 Identities = 41/44 (93%), Positives = 43/44 (97%)
 Frame = -3

Query: 134 VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTL 3
           VR+DTETFLN+IVPEG SAPWKHTLEGPDDMPAHIKSSMFGCTL
Sbjct: 94  VREDTETFLNRIVPEGSSAPWKHTLEGPDDMPAHIKSSMFGCTL 137



 Score = 80.5 bits (197), Expect(2) = 9e-35
 Identities = 40/69 (57%), Positives = 48/69 (69%)
 Frame = -1

Query: 439 PIRVKSQLNSTTDQNKRRGLMEGAPNNKWAQKTISLSPQQRGCHLITPKILKEIEQDLSG 260
           P  V++Q + T     +R  M      KWAQKT+SL P +RGCHL+T KI+KEIEQDLSG
Sbjct: 12  PFGVRAQQHPTV----KRDSMAECTVPKWAQKTVSLPPLRRGCHLVTSKIVKEIEQDLSG 67

Query: 259 FKCGLAHFF 233
           FKCGLAH F
Sbjct: 68  FKCGLAHLF 76


>ref|XP_002301884.1| predicted protein [Populus trichocarpa] gi|222843610|gb|EEE81157.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score = 96.3 bits (238), Expect(2) = 1e-33
 Identities = 43/44 (97%), Positives = 44/44 (100%)
 Frame = -3

Query: 134 VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCTL 3
           VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGC+L
Sbjct: 82  VRDDTETFLNKIVPEGRSAPWKHTLEGPDDMPAHIKSSMFGCSL 125



 Score = 73.6 bits (179), Expect(2) = 1e-33
 Identities = 33/42 (78%), Positives = 35/42 (83%)
 Frame = -1

Query: 358 KWAQKTISLSPQQRGCHLITPKILKEIEQDLSGFKCGLAHFF 233
           KWAQKTI+L P +RGCHLITPKIL EI  DLS FKCGLAH F
Sbjct: 23  KWAQKTITLPPHRRGCHLITPKILNEIGSDLSEFKCGLAHLF 64


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