BLASTX nr result

ID: Coptis25_contig00009804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009804
         (1330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32094.3| unnamed protein product [Vitis vinifera]              345   2e-92
ref|XP_002280233.2| PREDICTED: uncharacterized protein LOC100242...   333   8e-89
ref|XP_004143798.1| PREDICTED: uncharacterized protein LOC101210...   325   2e-86
ref|XP_003551171.1| PREDICTED: uncharacterized protein LOC100809...   322   1e-85
ref|XP_002314727.1| predicted protein [Populus trichocarpa] gi|2...   321   2e-85

>emb|CBI32094.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  345 bits (885), Expect = 2e-92
 Identities = 198/366 (54%), Positives = 247/366 (67%), Gaps = 11/366 (3%)
 Frame = +1

Query: 199  TSHFIQRASFFSYSPTPILSPSITLFWK--------RRISLNITLTWRFRVHCLSTTSAP 354
            TS FI ++S +  S         T  WK        +  +L + LT RFRV   S+    
Sbjct: 81   TSRFIAKSSLYGCS---------TSSWKINFENANVKTNNLELMLT-RFRVQSYSSRG-- 128

Query: 355  PARRRPSSKKKLDNSPAMEEEKDAFYVVRKGDIVGVYKTLNDCQAQXXXXXXXXXXXXYK 534
              R   S  +KL++ P MEEEKDAF+VVRKGD+VGVYKT +DCQAQ            YK
Sbjct: 129  --RGAKSQSQKLESKPVMEEEKDAFFVVRKGDVVGVYKTFSDCQAQVGSSICDPPVSVYK 186

Query: 535  GYSLPKEAEEYLTSRGLKNASYVINAADAKDDIFGALVSCPFQQPDSCKVNISSKPSPPK 714
            GY LPK+ EEYL SRGL+NA Y I AAD K+D+FG L+ C FQQ  S K  I SK  P +
Sbjct: 187  GYYLPKDTEEYLVSRGLRNALYTIRAADLKEDLFGKLMPCAFQQTASSKGEILSKDLPRE 246

Query: 715  RSQEVFG-SASNSQEAFEWTTSADTLKRQSKHMKLENSVKSQA--RKCFSCSIEFDGASK 885
             SQEV G     + E+   TT  D LK   +H+KL+  V++QA    C SC +EFDGASK
Sbjct: 247  SSQEVMGLEIVGAVESRPITT--DPLK---EHIKLDR-VEAQALFSDCRSCVVEFDGASK 300

Query: 886  GNPGLSGAGAVIRADDGSLVCRVREGVGIATNNVAEYRAIILGLRHALKKGFTQIRVQGD 1065
            GNPG +GA AV+R+D G ++CRVREG+G+ATNNVAEY+A+ILGL++ALKKG+T IRVQGD
Sbjct: 301  GNPGPAGAAAVLRSDSGRVICRVREGLGLATNNVAEYQAMILGLKYALKKGYTSIRVQGD 360

Query: 1066 SKLVCMQVQGLWKTKNDNMAILCKQVKELVDKFVSFQISHVLRDFNSEADTQANLALLLG 1245
            SKLVCMQVQGLWK +N NM+ILCK+ K+L ++F+S +I+HVLR  NSEAD QANLA+ L 
Sbjct: 361  SKLVCMQVQGLWKARNKNMSILCKEAKKLKNEFLSVEINHVLRGLNSEADAQANLAVHLA 420

Query: 1246 DGEVAE 1263
             GEV E
Sbjct: 421  VGEVQE 426


>ref|XP_002280233.2| PREDICTED: uncharacterized protein LOC100242330 [Vitis vinifera]
            gi|296087711|emb|CBI34967.3| unnamed protein product
            [Vitis vinifera]
          Length = 287

 Score =  333 bits (853), Expect = 8e-89
 Identities = 176/288 (61%), Positives = 210/288 (72%), Gaps = 2/288 (0%)
 Frame = +1

Query: 406  MEEEKDAFYVVRKGDIVGVYKTLNDCQAQXXXXXXXXXXXXYKGYSLPKEAEEYLTSRGL 585
            MEEEKDAFYVVRKGDIVG+YK+ ++CQAQ            YKGY LPK+AE +L S GL
Sbjct: 1    MEEEKDAFYVVRKGDIVGLYKSFSECQAQAGFSVCDPSVSVYKGYCLPKDAEVFLASHGL 60

Query: 586  KNASYVINAADAKDDIFGALVSCPFQQPDSCKVNISSKPSPPKRSQEVFGSASNSQEAFE 765
            KNASYVINAAD K DIFG L +CPFQQP S K   SS+  P KR  E   S +       
Sbjct: 61   KNASYVINAADVKGDIFGKLQACPFQQPGSSK-GTSSQDLPQKRLHEAIESINFGAVG-- 117

Query: 766  WTTSADTLKRQSKHMKLENSVKSQARK--CFSCSIEFDGASKGNPGLSGAGAVIRADDGS 939
                + +   Q KH +LEN +++QA    C S  ++FDGASKGNPG +GAGAV+RADDGS
Sbjct: 118  --PKSISTNCQRKHSRLENCIEAQAMSSNCHSWLLQFDGASKGNPGQAGAGAVLRADDGS 175

Query: 940  LVCRVREGVGIATNNVAEYRAIILGLRHALKKGFTQIRVQGDSKLVCMQVQGLWKTKNDN 1119
             V  +REGVGIATNNVAEYRA+ILG+++ALKKG  +IR +GDS+LVCMQ QGLWKTKN N
Sbjct: 176  AVIHLREGVGIATNNVAEYRALILGMKYALKKGIKRIRARGDSQLVCMQFQGLWKTKNQN 235

Query: 1120 MAILCKQVKELVDKFVSFQISHVLRDFNSEADTQANLALLLGDGEVAE 1263
            MA LC++ KEL  KF+SFQI HVLR+FNSEAD QANLA+ L +G+V E
Sbjct: 236  MADLCEEAKELGKKFLSFQIEHVLREFNSEADAQANLAVNLTNGQVQE 283


>ref|XP_004143798.1| PREDICTED: uncharacterized protein LOC101210930 [Cucumis sativus]
          Length = 373

 Score =  325 bits (833), Expect = 2e-86
 Identities = 177/324 (54%), Positives = 221/324 (68%), Gaps = 4/324 (1%)
 Frame = +1

Query: 304  TLTWRFRVHCLSTTSAPPARRRPSSKKKLDNSPAMEEEKDAFYVVRKGDIVGVYKTLNDC 483
            +L  RF + C ST      R+  S   KLD+ P +E E   F+VVRKGD+VGVYK+ +DC
Sbjct: 52   SLCSRFGLRCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDC 111

Query: 484  QAQXXXXXXXXXXXXYKGYSLPKEAEEYLTSRGLKNASYVINAADAKDDIFGALVSCPFQ 663
            QAQ            +KG+SLPK+ EEYL S GLKNA Y I AAD + D+FG+L  C F 
Sbjct: 112  QAQIGSSICDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFH 171

Query: 664  QPD-SCKVNISSKPSPPKRSQEVFGSASNSQEAFEWTTSADTLKRQS-KHMKLENSVKSQ 837
              D S     S + +  KRS+E         E    T    TLK  + KH+KLE+S+ S 
Sbjct: 172  GGDTSLTGETSGQDAIKKRSREAI-----VPENVGSTVLTPTLKDPTRKHIKLEDSIVSH 226

Query: 838  ARKCF--SCSIEFDGASKGNPGLSGAGAVIRADDGSLVCRVREGVGIATNNVAEYRAIIL 1011
            +      SC +EFDGASKGNPG +GAGAV+RA DGS++CR+REG+GIATNNVAEYRAI+L
Sbjct: 227  SVSSNRESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILL 286

Query: 1012 GLRHALKKGFTQIRVQGDSKLVCMQVQGLWKTKNDNMAILCKQVKELVDKFVSFQISHVL 1191
            GL+ ALKKGFT+I VQGDSKLVCMQVQGLWK K++NM+ LC +V +L +KF+SF+++HVL
Sbjct: 287  GLKSALKKGFTRIHVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVL 346

Query: 1192 RDFNSEADTQANLALLLGDGEVAE 1263
            R  NSEAD QANLAL L +GEV E
Sbjct: 347  RHLNSEADAQANLALTLAEGEVQE 370


>ref|XP_003551171.1| PREDICTED: uncharacterized protein LOC100809644 [Glycine max]
          Length = 345

 Score =  322 bits (825), Expect = 1e-85
 Identities = 174/317 (54%), Positives = 219/317 (69%)
 Frame = +1

Query: 319  FRVHCLSTTSAPPARRRPSSKKKLDNSPAMEEEKDAFYVVRKGDIVGVYKTLNDCQAQXX 498
            FR     TT    A++   SK + +   AM++EKDAFYVVRKGD+VG+Y +L D QAQ  
Sbjct: 46   FRSEFAVTTRCYSAKKGRKSKVEPE---AMKQEKDAFYVVRKGDVVGIYNSLADSQAQVG 102

Query: 499  XXXXXXXXXXYKGYSLPKEAEEYLTSRGLKNASYVINAADAKDDIFGALVSCPFQQPDSC 678
                      +KGYSL K+ EEYL S GLKNA Y I A D K+D+FG LV CP Q+P S 
Sbjct: 103  SSVCNPPVSVFKGYSLSKDTEEYLVSHGLKNALYTIRATDLKEDLFGMLVPCPLQEP-ST 161

Query: 679  KVNISSKPSPPKRSQEVFGSASNSQEAFEWTTSADTLKRQSKHMKLENSVKSQARKCFSC 858
            K + S+K    KRS  V G         E   S D L++Q   +KL+++  ++     +C
Sbjct: 162  KESTSNKDVSKKRSLGVLGQD-------EKVISEDPLRKQ---VKLDHAAVAEQ----TC 207

Query: 859  SIEFDGASKGNPGLSGAGAVIRADDGSLVCRVREGVGIATNNVAEYRAIILGLRHALKKG 1038
             +EFDGASKGNPG +GAGA++RA+DGSL+CR+REGVGIATNN AEYRA+ILG+++ALKKG
Sbjct: 208  FVEFDGASKGNPGKAGAGAILRANDGSLICRLREGVGIATNNAAEYRAMILGMKYALKKG 267

Query: 1039 FTQIRVQGDSKLVCMQVQGLWKTKNDNMAILCKQVKELVDKFVSFQISHVLRDFNSEADT 1218
            FT IR+QGDSKLVCMQ+ G WK KN+N++ L    KEL DKF SFQISHVLR+FNS+AD 
Sbjct: 268  FTGIRIQGDSKLVCMQIDGSWKVKNENLSTLYNVAKELKDKFSSFQISHVLRNFNSDADA 327

Query: 1219 QANLALLLGDGEVAETC 1269
            QANLA+ L DG+V E C
Sbjct: 328  QANLAINLADGQVQEEC 344


>ref|XP_002314727.1| predicted protein [Populus trichocarpa] gi|222863767|gb|EEF00898.1|
            predicted protein [Populus trichocarpa]
          Length = 282

 Score =  321 bits (823), Expect = 2e-85
 Identities = 165/291 (56%), Positives = 207/291 (71%), Gaps = 2/291 (0%)
 Frame = +1

Query: 406  MEEEKDAFYVVRKGDIVGVYKTLNDCQAQXXXXXXXXXXXXYKGYSLPKEAEEYLTSRGL 585
            M+ E DAF+VVRKGD+VGVYK   DCQAQ            YKGYSL K++E YL S GL
Sbjct: 1    MDHENDAFFVVRKGDVVGVYKNFADCQAQVGSSICDPPVSVYKGYSLSKDSEAYLVSHGL 60

Query: 586  KNASYVINAADAKDDIFGALVSCPFQQPDSCKVNISSKPSPPKRSQEVFGSASNSQEAFE 765
            +NA Y + AAD K+D+FG L+ CPFQQP S     + K    KRS+EV GS        E
Sbjct: 61   QNALYTVRAADLKEDLFGVLMPCPFQQPASSDAE-TLKNDTKKRSREVLGS--------E 111

Query: 766  WTTSADTLKRQSKHMKLENSVKSQARKCFS--CSIEFDGASKGNPGLSGAGAVIRADDGS 939
             T +A +    SKH  L+   + QA+   S  C +EFDGASKGNPG +GAGAV+R DDGS
Sbjct: 112  ITDTAGSTSMMSKHANLDTQAECQAQNSNSRSCLLEFDGASKGNPGQAGAGAVLRTDDGS 171

Query: 940  LVCRVREGVGIATNNVAEYRAIILGLRHALKKGFTQIRVQGDSKLVCMQVQGLWKTKNDN 1119
            L+CR+REG+GIATNN+AEYRAI+LG+++AL+KG+T+I+V+GDSKLVCMQ+QG WK K+ N
Sbjct: 172  LICRLREGLGIATNNMAEYRAILLGMKYALQKGYTKIQVKGDSKLVCMQIQGSWKAKHVN 231

Query: 1120 MAILCKQVKELVDKFVSFQISHVLRDFNSEADTQANLALLLGDGEVAETCE 1272
            +  LC + K+L + F+SF ISHVLR+FNSEAD QANLA+ L DGEV E  E
Sbjct: 232  ITNLCTEAKKLKNSFLSFHISHVLREFNSEADAQANLAVHLADGEVQEEFE 282


Top