BLASTX nr result

ID: Coptis25_contig00009797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009797
         (829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativu...   306   4e-81
emb|CBI26279.3| unnamed protein product [Vitis vinifera]              305   8e-81
ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]     305   8e-81
ref|XP_002517109.1| conserved hypothetical protein [Ricinus comm...   302   7e-80
ref|XP_003610782.1| Parafibromin [Medicago truncatula] gi|217073...   300   3e-79

>ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativus]
           gi|449513423|ref|XP_004164322.1| PREDICTED:
           parafibromin-like [Cucumis sativus]
          Length = 407

 Score =  306 bits (784), Expect = 4e-81
 Identities = 150/159 (94%), Positives = 156/159 (98%), Gaps = 2/159 (1%)
 Frame = -1

Query: 829 VPSAFQTLITIYNVKEFLEDGVFIPTDVKVKQMKGARPDCITVQKKVSRDQ--VVTAYEV 656
           VPSAFQTLITIYNVKEFLEDGVFIPTDVKVKQMKGARPDC+TVQKK SRD+  VVTAYEV
Sbjct: 249 VPSAFQTLITIYNVKEFLEDGVFIPTDVKVKQMKGARPDCVTVQKKFSRDRDRVVTAYEV 308

Query: 655 RDKPSALKAEDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKIIGFFMRFEDDSVESAKNV 476
           RDKPSALK+EDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKIIGF+MRFEDDS+ESAKNV
Sbjct: 309 RDKPSALKSEDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKIIGFYMRFEDDSLESAKNV 368

Query: 475 KQWNVKIISISKNKRHQDRAAALEVWDRLEEFVRSRSHT 359
           KQWNVKIISISKNKRHQDRAAALEVWDRLEEFVRSRSH+
Sbjct: 369 KQWNVKIISISKNKRHQDRAAALEVWDRLEEFVRSRSHS 407


>emb|CBI26279.3| unnamed protein product [Vitis vinifera]
          Length = 312

 Score =  305 bits (781), Expect = 8e-81
 Identities = 148/157 (94%), Positives = 152/157 (96%)
 Frame = -1

Query: 829 VPSAFQTLITIYNVKEFLEDGVFIPTDVKVKQMKGARPDCITVQKKVSRDQVVTAYEVRD 650
           VPSAFQTLITIYNVKEFLEDGVFIPTDVK KQMKGA+PDC+TVQKK SRD+VV AYEVRD
Sbjct: 156 VPSAFQTLITIYNVKEFLEDGVFIPTDVKAKQMKGAKPDCVTVQKKFSRDRVVMAYEVRD 215

Query: 649 KPSALKAEDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKIIGFFMRFEDDSVESAKNVKQ 470
           KPSALK EDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKIIGF+MRFEDDSVESAK VKQ
Sbjct: 216 KPSALKTEDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKIIGFYMRFEDDSVESAKIVKQ 275

Query: 469 WNVKIISISKNKRHQDRAAALEVWDRLEEFVRSRSHT 359
           WNVKIISISKNKRHQDRAAALEVWDRLEEFVRSRSHT
Sbjct: 276 WNVKIISISKNKRHQDRAAALEVWDRLEEFVRSRSHT 312


>ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]
          Length = 413

 Score =  305 bits (781), Expect = 8e-81
 Identities = 148/157 (94%), Positives = 152/157 (96%)
 Frame = -1

Query: 829 VPSAFQTLITIYNVKEFLEDGVFIPTDVKVKQMKGARPDCITVQKKVSRDQVVTAYEVRD 650
           VPSAFQTLITIYNVKEFLEDGVFIPTDVK KQMKGA+PDC+TVQKK SRD+VV AYEVRD
Sbjct: 257 VPSAFQTLITIYNVKEFLEDGVFIPTDVKAKQMKGAKPDCVTVQKKFSRDRVVMAYEVRD 316

Query: 649 KPSALKAEDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKIIGFFMRFEDDSVESAKNVKQ 470
           KPSALK EDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKIIGF+MRFEDDSVESAK VKQ
Sbjct: 317 KPSALKTEDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKIIGFYMRFEDDSVESAKIVKQ 376

Query: 469 WNVKIISISKNKRHQDRAAALEVWDRLEEFVRSRSHT 359
           WNVKIISISKNKRHQDRAAALEVWDRLEEFVRSRSHT
Sbjct: 377 WNVKIISISKNKRHQDRAAALEVWDRLEEFVRSRSHT 413


>ref|XP_002517109.1| conserved hypothetical protein [Ricinus communis]
           gi|223543744|gb|EEF45272.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 409

 Score =  302 bits (773), Expect = 7e-80
 Identities = 148/159 (93%), Positives = 155/159 (97%), Gaps = 2/159 (1%)
 Frame = -1

Query: 829 VPSAFQTLITIYNVKEFLEDGVFIPTDVKVKQMKGARPDCITVQKKVS--RDQVVTAYEV 656
           VPSAFQTLITIYNVKEFLEDGV+IPTDVKVKQMKGA+PDC+TVQKK S  R++V+TAYEV
Sbjct: 251 VPSAFQTLITIYNVKEFLEDGVYIPTDVKVKQMKGAKPDCVTVQKKFSTDRNRVMTAYEV 310

Query: 655 RDKPSALKAEDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKIIGFFMRFEDDSVESAKNV 476
           RDKPSALKAEDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKIIGFFMRFEDDSVESAK V
Sbjct: 311 RDKPSALKAEDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKIIGFFMRFEDDSVESAKTV 370

Query: 475 KQWNVKIISISKNKRHQDRAAALEVWDRLEEFVRSRSHT 359
           KQWNVKIISISKNKRHQDRAAALEVWDRLEEFVRSRSH+
Sbjct: 371 KQWNVKIISISKNKRHQDRAAALEVWDRLEEFVRSRSHS 409


>ref|XP_003610782.1| Parafibromin [Medicago truncatula] gi|217073460|gb|ACJ85089.1|
           unknown [Medicago truncatula]
           gi|355512117|gb|AES93740.1| Parafibromin [Medicago
           truncatula] gi|388521181|gb|AFK48652.1| unknown
           [Medicago truncatula]
          Length = 398

 Score =  300 bits (768), Expect = 3e-79
 Identities = 142/157 (90%), Positives = 152/157 (96%)
 Frame = -1

Query: 829 VPSAFQTLITIYNVKEFLEDGVFIPTDVKVKQMKGARPDCITVQKKVSRDQVVTAYEVRD 650
           VPSAFQTLITIYNVK+FLEDGV++PTDVKVK MKGA+PDC+TVQKK+SRD+ VTAYEVRD
Sbjct: 242 VPSAFQTLITIYNVKDFLEDGVYVPTDVKVKAMKGAKPDCVTVQKKLSRDRAVTAYEVRD 301

Query: 649 KPSALKAEDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKIIGFFMRFEDDSVESAKNVKQ 470
           KPSALK EDWDRVVAVFVLGK+WQFKDWPFKDHVEIFNKI GFFMRFEDDS+ESAK VKQ
Sbjct: 302 KPSALKPEDWDRVVAVFVLGKDWQFKDWPFKDHVEIFNKITGFFMRFEDDSIESAKTVKQ 361

Query: 469 WNVKIISISKNKRHQDRAAALEVWDRLEEFVRSRSHT 359
           WNVKIISISKNKRHQDRAAALEVWDRLEEFVRSRSH+
Sbjct: 362 WNVKIISISKNKRHQDRAAALEVWDRLEEFVRSRSHS 398


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