BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009788
         (1636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containi...   682   0.0  
ref|XP_002529915.1| pentatricopeptide repeat-containing protein,...   642   0.0  
ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containi...   636   e-180
ref|XP_002303044.1| predicted protein [Populus trichocarpa] gi|2...   636   e-180
ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containi...   625   e-177

>ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like [Vitis vinifera]
            gi|297744374|emb|CBI37344.3| unnamed protein product
            [Vitis vinifera]
          Length = 497

 Score =  682 bits (1761), Expect = 0.0
 Identities = 333/427 (77%), Positives = 382/427 (89%)
 Frame = -1

Query: 1456 ASKKAVSVILRREATKAIIEKKRGPTNSKKLLPRTVLEALHERVTALRWESALMVFELLQ 1277
            ASKKA+SVILRREATKA+IEKKRGP NSKKLLPRTVLEALHER+TALRWESAL VFELL+
Sbjct: 70   ASKKAISVILRREATKAVIEKKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLR 129

Query: 1276 EQLWYRPNPGVYIKLIVMLGKCKQPEKANDLFESMIEEGCIVNHESYTALVSAYSRSGLF 1097
            EQLWYRPN G+YIKLIVMLGKCKQPEKA+ LF +MI+EGC+VNHE+YTAL+SAYSRSGLF
Sbjct: 130  EQLWYRPNSGIYIKLIVMLGKCKQPEKAHALFLAMIDEGCVVNHEAYTALLSAYSRSGLF 189

Query: 1096 DRAFSLLDQMKNTRGCEPDVYTYTILIKSCLQVFAFDRVQTLLSDMADQRIKPSTVTYNT 917
            D+AFSLL++MKNT  C+PDV+TY++LIKSCLQV AFD+V  LLSDMA+Q IKP+TVTYNT
Sbjct: 190  DKAFSLLEKMKNTPDCQPDVHTYSVLIKSCLQVVAFDKVPVLLSDMANQGIKPNTVTYNT 249

Query: 916  LIDAYGRAGRYGEMESTLMEMLRQRECEPDVWTMNATLRAFGGSGQIETMENCYEKFQNS 737
            LIDAYG+A R+ EMESTL+EMLR+ +CEPDVWTMN+TLRAFG SGQIETME CYEKFQ++
Sbjct: 250  LIDAYGKAKRFAEMESTLLEMLREGKCEPDVWTMNSTLRAFGSSGQIETMEKCYEKFQSA 309

Query: 736  GIRPDIKTFNILLDSYGKAGSYQKMSAVMEYMQKYYFSWTIVTYNVVIDAFGRAGDLKQM 557
            GI P+IKTFNILLDSYGKA  Y+KMSAVMEYMQKY+FSWTIVTYNVVIDAFGRAGDLKQM
Sbjct: 310  GIEPNIKTFNILLDSYGKAEKYEKMSAVMEYMQKYHFSWTIVTYNVVIDAFGRAGDLKQM 369

Query: 556  EYLFRLMRTEKIKPNCITLSSLVKAYGRAGSAEKIGSVLRFIENSDVTLDTAFFNCLLDA 377
            EYLFRLMR+E+IKP+C+TL SLV+AYGRAG AEKIG VLRFIENSDV LD  FFNCL+DA
Sbjct: 370  EYLFRLMRSERIKPSCVTLCSLVRAYGRAGKAEKIGGVLRFIENSDVMLDIVFFNCLVDA 429

Query: 376  YGRMGCLAEMKEASEMMIERGCKADRITYSTMIKAYASNGITSRAKELEDMISKGKRTQE 197
            YGR+GC AEMK   EMM ++GCK D+ITY TMIKAY   G+TS AKEL+ ++     T+ 
Sbjct: 430  YGRLGCFAEMKGVLEMMKKKGCKPDKITYRTMIKAYKIGGMTSCAKELQGLMRMPDETRL 489

Query: 196  KLG*LDF 176
            ++G  DF
Sbjct: 490  EMGKPDF 496


>ref|XP_002529915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223530592|gb|EEF32469.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 636

 Score =  642 bits (1655), Expect = 0.0
 Identities = 309/417 (74%), Positives = 365/417 (87%)
 Frame = -1

Query: 1456 ASKKAVSVILRREATKAIIEKKRGPTNSKKLLPRTVLEALHERVTALRWESALMVFELLQ 1277
            AS+KA+SVILRREATKAIIEKKRGPTNSKKLLPRTVLEALHER+TALRWESAL VFELL+
Sbjct: 87   ASRKAISVILRREATKAIIEKKRGPTNSKKLLPRTVLEALHERITALRWESALKVFELLR 146

Query: 1276 EQLWYRPNPGVYIKLIVMLGKCKQPEKANDLFESMIEEGCIVNHESYTALVSAYSRSGLF 1097
            EQ+WYRP  G+YIKLIVMLGKCKQPEKA++LF++MI EGC V+HESYTAL+SAY RSGL 
Sbjct: 147  EQIWYRPYSGMYIKLIVMLGKCKQPEKAHELFQAMIHEGCDVSHESYTALLSAYGRSGLL 206

Query: 1096 DRAFSLLDQMKNTRGCEPDVYTYTILIKSCLQVFAFDRVQTLLSDMADQRIKPSTVTYNT 917
            D+AFSLL++MK    C+PDV+TY+ILIKSC+QVFAFD+ +TLLS+M    I P+T+TYNT
Sbjct: 207  DKAFSLLEEMKRNPDCQPDVHTYSILIKSCVQVFAFDKAKTLLSNMESLGISPNTITYNT 266

Query: 916  LIDAYGRAGRYGEMESTLMEMLRQRECEPDVWTMNATLRAFGGSGQIETMENCYEKFQNS 737
            LIDAYG+A  + EME+TL++ML Q+ CEPDVWTMN+TLRAFG SGQIETME CYEKFQ +
Sbjct: 267  LIDAYGKAKMFEEMEATLVKMLSQQNCEPDVWTMNSTLRAFGISGQIETMEKCYEKFQGA 326

Query: 736  GIRPDIKTFNILLDSYGKAGSYQKMSAVMEYMQKYYFSWTIVTYNVVIDAFGRAGDLKQM 557
            GI P I TFN+LLDSYGKAG Y+KMSAVMEYMQKY++SWTI+TYN+VIDAFGRAGDLKQM
Sbjct: 327  GIEPSIMTFNVLLDSYGKAGDYKKMSAVMEYMQKYHYSWTIITYNIVIDAFGRAGDLKQM 386

Query: 556  EYLFRLMRTEKIKPNCITLSSLVKAYGRAGSAEKIGSVLRFIENSDVTLDTAFFNCLLDA 377
            EYLFRLMR+E+IKP+C+TL SLV+AYG+A   EKI  VLRFIENSD+TLDT FFNCL+DA
Sbjct: 387  EYLFRLMRSERIKPSCVTLCSLVRAYGQAEKPEKIEGVLRFIENSDITLDTVFFNCLVDA 446

Query: 376  YGRMGCLAEMKEASEMMIERGCKADRITYSTMIKAYASNGITSRAKELEDMISKGKR 206
            YGRMGC AEMK    +M ++G + D+ITY TMIKAY+S G+T   KEL+D+ + G R
Sbjct: 447  YGRMGCFAEMKGVLILMEQKGYRPDKITYRTMIKAYSSKGMTKHVKELQDLEAAGVR 503


>ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like [Glycine max]
          Length = 515

 Score =  636 bits (1641), Expect = e-180
 Identities = 310/433 (71%), Positives = 370/433 (85%), Gaps = 6/433 (1%)
 Frame = -1

Query: 1456 ASKKAVSVILRREATKAIIEK------KRGPTNSKKLLPRTVLEALHERVTALRWESALM 1295
            AS+KAVSVIL REATKA+I+K      K+GP NSKKLLPRTVLEALHERVTALRWESAL 
Sbjct: 83   ASQKAVSVILWREATKAMIDKSGGGRKKKGPINSKKLLPRTVLEALHERVTALRWESALK 142

Query: 1294 VFELLQEQLWYRPNPGVYIKLIVMLGKCKQPEKANDLFESMIEEGCIVNHESYTALVSAY 1115
            VFELL EQ+WY+P+ GVYIKLIVMLGKCKQPEKA++LF++M++EGC+++ ESYTAL+SAY
Sbjct: 143  VFELLHEQIWYKPDTGVYIKLIVMLGKCKQPEKAHELFQAMVDEGCVLDCESYTALLSAY 202

Query: 1114 SRSGLFDRAFSLLDQMKNTRGCEPDVYTYTILIKSCLQVFAFDRVQTLLSDMADQRIKPS 935
            SRSGL D+AFSLL++MKNT GC+PDV TY+IL+KSCLQVFAFD++Q+LLSDM ++ IKP+
Sbjct: 203  SRSGLLDKAFSLLEEMKNTPGCQPDVQTYSILLKSCLQVFAFDKIQSLLSDMTNRGIKPN 262

Query: 934  TVTYNTLIDAYGRAGRYGEMESTLMEMLRQRECEPDVWTMNATLRAFGGSGQIETMENCY 755
            TVTYNTLIDAYG+A ++ EMES L+EML  R C+PDVWTMN+TLRAFG  GQIETME CY
Sbjct: 263  TVTYNTLIDAYGKARKFSEMESILVEMLADRYCQPDVWTMNSTLRAFGNIGQIETMEKCY 322

Query: 754  EKFQNSGIRPDIKTFNILLDSYGKAGSYQKMSAVMEYMQKYYFSWTIVTYNVVIDAFGRA 575
            EKFQN+GI+P+++TFNILLDSYGKA  Y+KMSAVMEYMQKY++SWTIVT+N+VIDAFG+A
Sbjct: 323  EKFQNAGIQPNVQTFNILLDSYGKAQDYKKMSAVMEYMQKYHYSWTIVTFNIVIDAFGKA 382

Query: 574  GDLKQMEYLFRLMRTEKIKPNCITLSSLVKAYGRAGSAEKIGSVLRFIENSDVTLDTAFF 395
            GDLKQMEYLFRLMR+E+IKP+C+TL SLV+AY RAG  EKI  VLRF+ENSDV LDT FF
Sbjct: 383  GDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKISGVLRFVENSDVLLDTVFF 442

Query: 394  NCLLDAYGRMGCLAEMKEASEMMIERGCKADRITYSTMIKAYASNGITSRAKELEDMISK 215
            NCL+DAY R+GCLAEMK   EMM + GCK D +TY TMIK Y   G+ S AKEL +++  
Sbjct: 443  NCLVDAYARLGCLAEMKGVLEMMKQNGCKPDIVTYRTMIKTYTYKGMDSHAKELRELLPT 502

Query: 214  GKRTQEKLG*LDF 176
              R   K    DF
Sbjct: 503  VNRPPLKRDKPDF 515


>ref|XP_002303044.1| predicted protein [Populus trichocarpa] gi|222844770|gb|EEE82317.1|
            predicted protein [Populus trichocarpa]
          Length = 485

 Score =  636 bits (1640), Expect = e-180
 Identities = 308/419 (73%), Positives = 365/419 (87%)
 Frame = -1

Query: 1456 ASKKAVSVILRREATKAIIEKKRGPTNSKKLLPRTVLEALHERVTALRWESALMVFELLQ 1277
            AS+KA+SVILRREATKA+IEKKRGPTNSKKLLP+TVLEALHER+TALRW SAL VFELL+
Sbjct: 72   ASQKAISVILRREATKAVIEKKRGPTNSKKLLPQTVLEALHERITALRWASALEVFELLR 131

Query: 1276 EQLWYRPNPGVYIKLIVMLGKCKQPEKANDLFESMIEEGCIVNHESYTALVSAYSRSGLF 1097
            EQLWYRP  G+Y+KLIVMLGKCKQP+KA+ LF++MI+EGC V HESYTAL+SAY RSGLF
Sbjct: 132  EQLWYRPYAGMYVKLIVMLGKCKQPDKAHQLFQAMIDEGCAVTHESYTALLSAYGRSGLF 191

Query: 1096 DRAFSLLDQMKNTRGCEPDVYTYTILIKSCLQVFAFDRVQTLLSDMADQRIKPSTVTYNT 917
            D+AFS++++MKNT  C PDV+TY+ILIKSCLQVFAFD+VQ LLSDM    I+P+TVT+  
Sbjct: 192  DKAFSIMEEMKNTPDCRPDVHTYSILIKSCLQVFAFDKVQVLLSDMESLGIRPNTVTF-- 249

Query: 916  LIDAYGRAGRYGEMESTLMEMLRQRECEPDVWTMNATLRAFGGSGQIETMENCYEKFQNS 737
                        EME+TLMEML Q++CEPDVWTMN+T+RAFGGSGQ+E MENCYEKFQ++
Sbjct: 250  -----------AEMEATLMEMLSQQDCEPDVWTMNSTIRAFGGSGQMEMMENCYEKFQSA 298

Query: 736  GIRPDIKTFNILLDSYGKAGSYQKMSAVMEYMQKYYFSWTIVTYNVVIDAFGRAGDLKQM 557
            GI P+IKTFNILLDSYGKAG+YQKMSAVMEYMQ+Y++SWTIVTYNVVIDAFGRAGDLKQM
Sbjct: 299  GIEPNIKTFNILLDSYGKAGNYQKMSAVMEYMQRYHYSWTIVTYNVVIDAFGRAGDLKQM 358

Query: 556  EYLFRLMRTEKIKPNCITLSSLVKAYGRAGSAEKIGSVLRFIENSDVTLDTAFFNCLLDA 377
            EYLFRLMR+E+IKP+C+TL SLV+AY  AG  EKIGSVLRFIENSDVTLDT FFNCL+DA
Sbjct: 359  EYLFRLMRSERIKPSCVTLCSLVRAYREAGKPEKIGSVLRFIENSDVTLDTVFFNCLVDA 418

Query: 376  YGRMGCLAEMKEASEMMIERGCKADRITYSTMIKAYASNGITSRAKELEDMISKGKRTQ 200
            YGR+ C AEMKE  E+M E+GCK D++TY TMIKAY+  G+TS AK+L +++   + T+
Sbjct: 419  YGRLECFAEMKEVLELMEEKGCKPDKVTYRTMIKAYSIKGMTSHAKKLRNLLGSVEVTR 477


>ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like [Cucumis sativus]
          Length = 511

 Score =  625 bits (1613), Expect = e-177
 Identities = 301/425 (70%), Positives = 365/425 (85%), Gaps = 3/425 (0%)
 Frame = -1

Query: 1456 ASKKAVSVILRREATKAIIEKKRGPTNSKKLLPRTVLEALHERVTALRWESALMVFELLQ 1277
            AS+KA+SVILRREATKA+IE+KRGP NSKKLLPRTVLEALH+R+T LRWESAL VFELL+
Sbjct: 87   ASQKAISVILRREATKAVIERKRGPNNSKKLLPRTVLEALHDRITTLRWESALKVFELLR 146

Query: 1276 EQLWYRPNPGVYIKLIVMLGKCKQPEKANDLFESMIEEGCIVNHESYTALVSAYSRSGLF 1097
            EQLWYRP  G+YIKLIVMLGKCKQ EKA +LF+ MIEEGC V+HESYTAL+SAYSRSGL 
Sbjct: 147  EQLWYRPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSRSGLL 206

Query: 1096 DRAFSLLDQMKNTRGCEPDVYTYTILIKSCLQVFAFDRVQTLLSDMADQRIKPSTVTYNT 917
            D AFS+L++MKN+  C+PDV+TY+ILIKSCLQVFAF++ QTLLSDM  + IKP+T+TYNT
Sbjct: 207  DEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITYNT 266

Query: 916  LIDAYGRAGRYGEMESTLMEMLRQRECEPDVWTMNATLRAFGGSGQIETMENCYEKFQNS 737
             IDAYG+A  + EMES L++ML    C+PDVWTMN+TLRAFG SGQ+ETME CYEKFQ +
Sbjct: 267  FIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEA 326

Query: 736  GIRPDIKTFNILLDSYGKAGSYQKMSAVMEYMQKYYFSWTIVTYNVVIDAFGRAGDLKQM 557
            GI+P I+TFNILLDSYGKA SY+KMSAVMEYMQKY++SWTIVTYN+VIDAFGRAG+LKQM
Sbjct: 327  GIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQM 386

Query: 556  EYLFRLMRTEKIKPNCITLSSLVKAYGRAGSAEKIGSVLRFIENSDVTLDTAFFNCLLDA 377
            E+LFRLMR+E+IKP+C+TL SLV+AYG+AG  EKI SVL  +ENSD+ LDT F+NCL+DA
Sbjct: 387  EHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLVDA 446

Query: 376  YGRMGCLAEMKEASEMMIERGCKADRITYSTMIKAYASNGITSRAKELEDMIS---KGKR 206
            YGR+ C AEMK+   MM +RGCK D+ TY TM +AY+  G+ + AKE++++I+     KR
Sbjct: 447  YGRLECFAEMKKVLGMMEQRGCKPDKTTYRTMARAYSDGGMANHAKEIQELITTAEPSKR 506

Query: 205  TQEKL 191
            T+  L
Sbjct: 507  TRPDL 511