BLASTX nr result
ID: Coptis25_contig00009781
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00009781
(520 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003532149.1| PREDICTED: protein SEC13 homolog [Glycine max] 130 4e-63
ref|XP_003551800.1| PREDICTED: protein SEC13 homolog [Glycine max] 127 2e-62
dbj|BAJ10727.1| SEC13 family protein [Lotus japonicus] gi|388515... 126 2e-62
gb|ACU20139.1| unknown [Glycine max] 130 2e-62
ref|XP_003532142.1| PREDICTED: protein SEC13 homolog [Glycine max] 130 3e-62
>ref|XP_003532149.1| PREDICTED: protein SEC13 homolog [Glycine max]
Length = 301
Score = 130 bits (326), Expect(3) = 4e-63
Identities = 60/71 (84%), Positives = 63/71 (88%)
Frame = +1
Query: 136 FGSLLASSSYDGRVIIWKEGNQNEWRLAHVFSEHKVSVNSICWAPHELGLALACGSSDGN 315
FGSLLAS SYDGRVI+WKEGNQNEW AHVF +HK SVNS+ WAPHELGL LACGSSDGN
Sbjct: 68 FGSLLASCSYDGRVIVWKEGNQNEWTQAHVFDDHKSSVNSVAWAPHELGLCLACGSSDGN 127
Query: 316 ISVLTAGADGG 348
ISVLTA ADGG
Sbjct: 128 ISVLTARADGG 138
Score = 95.5 bits (236), Expect(3) = 4e-63
Identities = 44/62 (70%), Positives = 49/62 (79%), Gaps = 3/62 (4%)
Frame = +2
Query: 344 EGGWDTTRIGQAHPAGVTSVSWDPALAPGAFVGNGSLEPVTKLVSGGCDNTV---KLTNG 514
+GGWDT RI QAHP GVTSVSW P++APGA VG G L+PV KL SGGCDNTV KL NG
Sbjct: 136 DGGWDTVRIDQAHPVGVTSVSWAPSMAPGALVGAGLLDPVQKLCSGGCDNTVKVWKLNNG 195
Query: 515 VW 520
+W
Sbjct: 196 LW 197
Score = 62.4 bits (150), Expect(3) = 4e-63
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +2
Query: 2 TIKIVGVSSTASQHHATLSGHQGPVWQVAWALLAMLRGVASC 127
TIKI+GVS+TASQH ATL+GHQGPVWQVAWA +ASC
Sbjct: 34 TIKIIGVSNTASQHLATLTGHQGPVWQVAWAHPKFGSLLASC 75
>ref|XP_003551800.1| PREDICTED: protein SEC13 homolog [Glycine max]
Length = 301
Score = 127 bits (319), Expect(3) = 2e-62
Identities = 58/71 (81%), Positives = 62/71 (87%)
Frame = +1
Query: 136 FGSLLASSSYDGRVIIWKEGNQNEWRLAHVFSEHKVSVNSICWAPHELGLALACGSSDGN 315
FGSLLAS SYDGRVI+WKEGNQNEW AHVF +HK SVNS+ W PHELGL LACGSSDGN
Sbjct: 68 FGSLLASCSYDGRVIVWKEGNQNEWTQAHVFDDHKSSVNSVAWVPHELGLCLACGSSDGN 127
Query: 316 ISVLTAGADGG 348
ISV+TA ADGG
Sbjct: 128 ISVVTARADGG 138
Score = 96.3 bits (238), Expect(3) = 2e-62
Identities = 44/62 (70%), Positives = 49/62 (79%), Gaps = 3/62 (4%)
Frame = +2
Query: 344 EGGWDTTRIGQAHPAGVTSVSWDPALAPGAFVGNGSLEPVTKLVSGGCDNTV---KLTNG 514
+GGWDT RI QAHP GVTSVSW P++APGA VG G L+PV KL SGGCDNTV KL NG
Sbjct: 136 DGGWDTARIDQAHPVGVTSVSWAPSMAPGALVGGGLLDPVQKLCSGGCDNTVKVWKLNNG 195
Query: 515 VW 520
+W
Sbjct: 196 LW 197
Score = 62.4 bits (150), Expect(3) = 2e-62
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +2
Query: 2 TIKIVGVSSTASQHHATLSGHQGPVWQVAWALLAMLRGVASC 127
TIKI+GVS+TASQH ATL+GHQGPVWQVAWA +ASC
Sbjct: 34 TIKIIGVSNTASQHLATLTGHQGPVWQVAWAHPKFGSLLASC 75
>dbj|BAJ10727.1| SEC13 family protein [Lotus japonicus] gi|388515669|gb|AFK45896.1|
unknown [Lotus japonicus]
Length = 301
Score = 126 bits (316), Expect(3) = 2e-62
Identities = 58/71 (81%), Positives = 62/71 (87%)
Frame = +1
Query: 136 FGSLLASSSYDGRVIIWKEGNQNEWRLAHVFSEHKVSVNSICWAPHELGLALACGSSDGN 315
FGS++AS SYDGRVIIWKEGNQNEW AHVF +HK SVNS+ WAPHELGL LACGSSDGN
Sbjct: 68 FGSMIASCSYDGRVIIWKEGNQNEWIQAHVFDDHKSSVNSVVWAPHELGLCLACGSSDGN 127
Query: 316 ISVLTAGADGG 348
ISV TA ADGG
Sbjct: 128 ISVFTARADGG 138
Score = 96.3 bits (238), Expect(3) = 2e-62
Identities = 45/62 (72%), Positives = 50/62 (80%), Gaps = 3/62 (4%)
Frame = +2
Query: 344 EGGWDTTRIGQAHPAGVTSVSWDPALAPGAFVGNGSLEPVTKLVSGGCDNTV---KLTNG 514
+GGWDT+RI QAHP GVTSVSW P++APGA VG G L+PV KL SGGCDNTV KLTNG
Sbjct: 136 DGGWDTSRIDQAHPVGVTSVSWAPSMAPGALVGAGLLDPVQKLCSGGCDNTVKVWKLTNG 195
Query: 515 VW 520
W
Sbjct: 196 NW 197
Score = 63.5 bits (153), Expect(3) = 2e-62
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +2
Query: 2 TIKIVGVSSTASQHHATLSGHQGPVWQVAWALLAMLRGVASC 127
TIKI+GVS+TASQH ATL+GHQGPVWQVAWA +ASC
Sbjct: 34 TIKIIGVSNTASQHLATLAGHQGPVWQVAWAHPKFGSMIASC 75
>gb|ACU20139.1| unknown [Glycine max]
Length = 301
Score = 130 bits (326), Expect(3) = 2e-62
Identities = 60/71 (84%), Positives = 63/71 (88%)
Frame = +1
Query: 136 FGSLLASSSYDGRVIIWKEGNQNEWRLAHVFSEHKVSVNSICWAPHELGLALACGSSDGN 315
FGSLLAS SYDGRVI+WKEGNQNEW AHVF +HK SVNS+ WAPHELGL LACGSSDGN
Sbjct: 68 FGSLLASCSYDGRVIVWKEGNQNEWTQAHVFDDHKSSVNSVAWAPHELGLCLACGSSDGN 127
Query: 316 ISVLTAGADGG 348
ISVLTA ADGG
Sbjct: 128 ISVLTARADGG 138
Score = 93.2 bits (230), Expect(3) = 2e-62
Identities = 43/62 (69%), Positives = 48/62 (77%), Gaps = 3/62 (4%)
Frame = +2
Query: 344 EGGWDTTRIGQAHPAGVTSVSWDPALAPGAFVGNGSLEPVTKLVSGGCDNTV---KLTNG 514
+GGWDT I QAHP GVTSVSW P++APGA VG G L+PV KL SGGCDNTV KL NG
Sbjct: 136 DGGWDTVSIDQAHPVGVTSVSWAPSMAPGALVGAGLLDPVQKLCSGGCDNTVKVWKLNNG 195
Query: 515 VW 520
+W
Sbjct: 196 LW 197
Score = 62.4 bits (150), Expect(3) = 2e-62
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +2
Query: 2 TIKIVGVSSTASQHHATLSGHQGPVWQVAWALLAMLRGVASC 127
TIKI+GVS+TASQH ATL+GHQGPVWQVAWA +ASC
Sbjct: 34 TIKIIGVSNTASQHLATLTGHQGPVWQVAWAHPKFGSLLASC 75
>ref|XP_003532142.1| PREDICTED: protein SEC13 homolog [Glycine max]
Length = 301
Score = 130 bits (326), Expect(3) = 3e-62
Identities = 60/71 (84%), Positives = 63/71 (88%)
Frame = +1
Query: 136 FGSLLASSSYDGRVIIWKEGNQNEWRLAHVFSEHKVSVNSICWAPHELGLALACGSSDGN 315
FGSLLAS SYDGRVI+WKEGNQNEW AHVF +HK SVNS+ WAPHELGL LACGSSDGN
Sbjct: 68 FGSLLASCSYDGRVIVWKEGNQNEWTQAHVFDDHKSSVNSVAWAPHELGLCLACGSSDGN 127
Query: 316 ISVLTAGADGG 348
ISVLTA ADGG
Sbjct: 128 ISVLTARADGG 138
Score = 95.5 bits (236), Expect(3) = 3e-62
Identities = 44/62 (70%), Positives = 49/62 (79%), Gaps = 3/62 (4%)
Frame = +2
Query: 344 EGGWDTTRIGQAHPAGVTSVSWDPALAPGAFVGNGSLEPVTKLVSGGCDNTV---KLTNG 514
+GGWDT RI QAHP GVTSVSW P++APGA VG G L+PV KL SGGCDNTV KL NG
Sbjct: 136 DGGWDTARIDQAHPVGVTSVSWAPSMAPGALVGAGLLDPVQKLCSGGCDNTVKVWKLNNG 195
Query: 515 VW 520
+W
Sbjct: 196 LW 197
Score = 59.3 bits (142), Expect(3) = 3e-62
Identities = 28/42 (66%), Positives = 33/42 (78%)
Frame = +2
Query: 2 TIKIVGVSSTASQHHATLSGHQGPVWQVAWALLAMLRGVASC 127
TIKI+GVS++ASQH ATL+GHQGPVWQV WA +ASC
Sbjct: 34 TIKIIGVSNSASQHLATLTGHQGPVWQVVWAHPKFGSLLASC 75