BLASTX nr result

ID: Coptis25_contig00009777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009777
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869906.1| hypothetical protein ARALYDRAFT_329490 [Arab...    70   1e-18
ref|NP_193844.2| amino acid transporter 1 [Arabidopsis thaliana]...    69   2e-18
ref|XP_002318265.1| cationic amino acid transporter [Populus tri...    72   2e-17
ref|XP_002319043.1| cationic amino acid transporter [Populus tri...    72   5e-17
ref|XP_002526614.1| cationic amino acid transporter, putative [R...    71   5e-17

>ref|XP_002869906.1| hypothetical protein ARALYDRAFT_329490 [Arabidopsis lyrata subsp.
           lyrata] gi|297315742|gb|EFH46165.1| hypothetical protein
           ARALYDRAFT_329490 [Arabidopsis lyrata subsp. lyrata]
          Length = 599

 Score = 69.7 bits (169), Expect(2) = 1e-18
 Identities = 34/49 (69%), Positives = 38/49 (77%)
 Frame = +3

Query: 99  DLMWFGIGVVIGSRIFVLTGQEAKEIVGPAVVLPYAISGLSAMLCVMLH 245
           DLMWFGIG VIGS IFVLTG EA+   GPAVVL Y +SG+SAML V  +
Sbjct: 80  DLMWFGIGAVIGSGIFVLTGLEARNASGPAVVLSYVVSGVSAMLSVFCY 128



 Score = 48.1 bits (113), Expect(2) = 1e-18
 Identities = 21/31 (67%), Positives = 23/31 (74%)
 Frame = +1

Query: 1   KTRGCTCTKDAFLPEESFQKRGNYGKVWKPT 93
           + RGC+CTKD FLPEESFQ  GNY K  K T
Sbjct: 13  RRRGCSCTKDDFLPEESFQSMGNYLKALKET 43


>ref|NP_193844.2| amino acid transporter 1 [Arabidopsis thaliana]
           gi|75297892|sp|Q84MA5.1|CAAT1_ARATH RecName:
           Full=Cationic amino acid transporter 1; AltName:
           Full=Amino acid transporter 1 gi|30102670|gb|AAP21253.1|
           At4g21120 [Arabidopsis thaliana]
           gi|110743257|dbj|BAE99519.1| amino acid transport
           protein AAT1 [Arabidopsis thaliana]
           gi|332659005|gb|AEE84405.1| amino acid transporter 1
           [Arabidopsis thaliana]
          Length = 594

 Score = 68.9 bits (167), Expect(2) = 2e-18
 Identities = 34/49 (69%), Positives = 38/49 (77%)
 Frame = +3

Query: 99  DLMWFGIGVVIGSRIFVLTGQEAKEIVGPAVVLPYAISGLSAMLCVMLH 245
           DLMWFGIG VIGS IFVLTG EA+   GPAVVL Y +SG+SAML V  +
Sbjct: 78  DLMWFGIGAVIGSGIFVLTGLEARNHSGPAVVLSYVVSGVSAMLSVFCY 126



 Score = 48.1 bits (113), Expect(2) = 2e-18
 Identities = 21/31 (67%), Positives = 23/31 (74%)
 Frame = +1

Query: 1   KTRGCTCTKDAFLPEESFQKRGNYGKVWKPT 93
           + RGC+CTKD FLPEESFQ  GNY K  K T
Sbjct: 11  RRRGCSCTKDDFLPEESFQSMGNYLKALKET 41


>ref|XP_002318265.1| cationic amino acid transporter [Populus trichocarpa]
           gi|222858938|gb|EEE96485.1| cationic amino acid
           transporter [Populus trichocarpa]
          Length = 588

 Score = 72.0 bits (175), Expect(2) = 2e-17
 Identities = 37/57 (64%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
 Frame = +3

Query: 81  MEANMT--DLMWFGIGVVIGSRIFVLTGQEAKEIVGPAVVLPYAISGLSAMLCVMLH 245
           M+ N+T  DL+WFGIG VIG+ IFVLTG EAKE  GPAVVL Y +SG+SAML V  +
Sbjct: 64  MKKNLTWWDLIWFGIGAVIGAGIFVLTGLEAKEHAGPAVVLSYVVSGVSAMLSVFCY 120



 Score = 41.6 bits (96), Expect(2) = 2e-17
 Identities = 18/28 (64%), Positives = 21/28 (75%)
 Frame = +1

Query: 10 GCTCTKDAFLPEESFQKRGNYGKVWKPT 93
          GC+CTK+ FLPEESFQ  GNY +  K T
Sbjct: 8  GCSCTKNDFLPEESFQSIGNYLQALKET 35


>ref|XP_002319043.1| cationic amino acid transporter [Populus trichocarpa]
           gi|222857419|gb|EEE94966.1| cationic amino acid
           transporter [Populus trichocarpa]
          Length = 604

 Score = 71.6 bits (174), Expect(2) = 5e-17
 Identities = 35/57 (61%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
 Frame = +3

Query: 81  MEANMT--DLMWFGIGVVIGSRIFVLTGQEAKEIVGPAVVLPYAISGLSAMLCVMLH 245
           M+ N+T  DLMWFG+G V+G+ IFVLTG EA+E  GPAVVL Y +SG+SAML V  +
Sbjct: 72  MKKNLTWWDLMWFGVGAVVGAGIFVLTGLEARENTGPAVVLSYVVSGVSAMLSVFCY 128



 Score = 40.8 bits (94), Expect(2) = 5e-17
 Identities = 17/24 (70%), Positives = 19/24 (79%)
 Frame = +1

Query: 1  KTRGCTCTKDAFLPEESFQKRGNY 72
          K RGC+CTKD FLPEESF+   NY
Sbjct: 13 KKRGCSCTKDDFLPEESFRSWTNY 36


>ref|XP_002526614.1| cationic amino acid transporter, putative [Ricinus communis]
           gi|223534054|gb|EEF35773.1| cationic amino acid
           transporter, putative [Ricinus communis]
          Length = 587

 Score = 71.2 bits (173), Expect(2) = 5e-17
 Identities = 35/57 (61%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
 Frame = +3

Query: 81  MEANMT--DLMWFGIGVVIGSRIFVLTGQEAKEIVGPAVVLPYAISGLSAMLCVMLH 245
           M+ N+T  DL+WFGIG VIG+ IFVLTG EA+ + GPAVVL Y +SG+SAML V  +
Sbjct: 71  MKKNLTWWDLIWFGIGAVIGAGIFVLTGLEAQSVAGPAVVLSYVVSGISAMLSVFCY 127



 Score = 41.2 bits (95), Expect(2) = 5e-17
 Identities = 17/31 (54%), Positives = 21/31 (67%)
 Frame = +1

Query: 1   KTRGCTCTKDAFLPEESFQKRGNYGKVWKPT 93
           + RGC+CTK  F+PEESFQ  G+Y K    T
Sbjct: 12  RRRGCSCTKSDFIPEESFQSMGSYLKALSET 42


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