BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009775
         (1075 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633196.1| PREDICTED: general transcription factor IIE ...   194   4e-47
ref|XP_004138223.1| PREDICTED: general transcription factor IIE ...   165   2e-38
ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|2...   165   2e-38
gb|ABR16597.1| unknown [Picea sitchensis]                             161   2e-37
ref|XP_002314760.1| predicted protein [Populus trichocarpa] gi|2...   151   3e-34

>ref|XP_003633196.1| PREDICTED: general transcription factor IIE subunit 1-like [Vitis
            vinifera] gi|297735317|emb|CBI17757.3| unnamed protein
            product [Vitis vinifera]
          Length = 475

 Score =  194 bits (492), Expect = 4e-47
 Identities = 110/213 (51%), Positives = 138/213 (64%), Gaps = 6/213 (2%)
 Frame = -2

Query: 1074 GSLQAWEXXXXXXXXXANGDPSVNDPSRSSLGQGFSGTPMPYVGETKVEVALSGVAVMEE 895
            GSLQAWE         ANGD + ND S+SS G GF GTPMP+VGETKVEVA SGV V EE
Sbjct: 251  GSLQAWEARANAAGRAANGDSNANDSSKSSQGLGFGGTPMPFVGETKVEVAFSGVGVKEE 310

Query: 894  DTKPEAG--AMKVVPPWLIKQGMNLTSEQRGGLKQDLEMENSSATEGSSDDKKSRVDEKD 721
            D+K E    ++KV+PPW+IK+GMNLT EQRG +KQ+ +M +SSA  GSSDDKKS  ++ +
Sbjct: 311  DSKSEIANASLKVLPPWMIKEGMNLTKEQRGEIKQESKMGSSSAPLGSSDDKKSTTNKDE 370

Query: 720  EKSIQDEYVKAYYXXXXXXXXXXXXXXXXXXXXXXETNDISNEEIPSDRRVGLKSRREEN 541
            EK++QDEYVKAYY                           S     S+R+VG+KS+R+E+
Sbjct: 371  EKNLQDEYVKAYYAAILKRQQEQEEAAKKQLELSNAHISNSVLGTSSNRQVGMKSKRDED 430

Query: 540  -GSDAVVWEEAPTSGRGS---KLYDLNVEANAS 454
             G D   WEEAPT+G  S   K+ DLNV+A+AS
Sbjct: 431  EGDDDFEWEEAPTAGNKSESFKVNDLNVQADAS 463


>ref|XP_004138223.1| PREDICTED: general transcription factor IIE subunit 1-like [Cucumis
            sativus]
          Length = 475

 Score =  165 bits (418), Expect = 2e-38
 Identities = 95/210 (45%), Positives = 124/210 (59%), Gaps = 4/210 (1%)
 Frame = -2

Query: 1074 GSLQAWEXXXXXXXXXANGDPSVNDPSRSSLGQGFSGTPMPYVGETKVEVALSGVAVMEE 895
            G+L AWE          NGD + NDPS+SS  QG+ GTPMP+VGETKVEVA SG      
Sbjct: 252  GTLLAWEARASAAARGINGDLNGNDPSKSS--QGYGGTPMPFVGETKVEVAFSGAEGTGV 309

Query: 894  DTKPEAG--AMKVVPPWLIKQGMNLTSEQRGGLKQDLEMENSSATEGSSDDKKSRVDEKD 721
            D K E+   ++KV+PPW+IK+GMNLT EQRG +K + + +  SA+   SDDKKS  ++ D
Sbjct: 310  DAKSESENTSLKVLPPWMIKKGMNLTKEQRGEVKDESKTDAGSASAQFSDDKKSLANDDD 369

Query: 720  EKSIQDEYVKAYYXXXXXXXXXXXXXXXXXXXXXXETNDISNEEIPSDRRVGLKSRREEN 541
            + +IQDEYVKAYY                           S     S R+VG+K++REE+
Sbjct: 370  KTNIQDEYVKAYYAAILKKQQELEEAAKGQQELSSTEVTESVANTNSSRQVGMKAKREED 429

Query: 540  GSDAVVWEEAPTSGRGSKLY--DLNVEANA 457
              D + WEEAP  G  ++ Y  DLNVEA+A
Sbjct: 430  EDDDIEWEEAPIGGNANENYKVDLNVEASA 459


>ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|222874815|gb|EEF11946.1|
            predicted protein [Populus trichocarpa]
          Length = 472

 Score =  165 bits (418), Expect = 2e-38
 Identities = 102/214 (47%), Positives = 127/214 (59%), Gaps = 7/214 (3%)
 Frame = -2

Query: 1074 GSLQAWEXXXXXXXXXANGDPSVNDPSRSSLGQGFSGTPMPYVGETKVEVALSGVAVMEE 895
            GSLQ W+         ANGD S NDPSRSS  QG+ GTPMP++GETKVEV+ SGV   +E
Sbjct: 251  GSLQEWQIHASAAGRAANGDSSYNDPSRSS--QGYGGTPMPFLGETKVEVSFSGVEG-KE 307

Query: 894  DTKPEAGA--MKVVPPWLIKQGMNLTSEQRGGLKQDLEMENSSATEGSSDDKKSRVDEKD 721
            D K E  +  +KV+PPW+IKQGMNLT EQRG +KQ  +M++SSA     DDKK  ++  D
Sbjct: 308  DLKSETASTGLKVLPPWMIKQGMNLTKEQRGEVKQGSKMDDSSAAAEPPDDKKISIENDD 367

Query: 720  EKSIQDEYVKAYYXXXXXXXXXXXXXXXXXXXXXXETNDISNEEIPSDRRVGLKSRREEN 541
            +  I+DEYVKAYY                       +      +  SDR+VG+KS+REE+
Sbjct: 368  K--IKDEYVKAYYAALLQKQREAEESAEKQQELLQTSISNGFSKSSSDRQVGMKSKREED 425

Query: 540  G--SDAVVWEEAPTSG---RGSKLYDLNVEANAS 454
                D V WEEAP  G    G K+ DLN EA AS
Sbjct: 426  DEPDDDVEWEEAPIGGNTSEGFKVNDLNAEAPAS 459


>gb|ABR16597.1| unknown [Picea sitchensis]
          Length = 480

 Score =  161 bits (408), Expect = 2e-37
 Identities = 87/194 (44%), Positives = 123/194 (63%), Gaps = 2/194 (1%)
 Frame = -2

Query: 1074 GSLQAWEXXXXXXXXXANGDPSVNDPSRSSLGQGFSGTPMPYVGETKVEVALSGVAVMEE 895
            GSL  WE          +GD + N+ S+SS GQGF GTPMP++GETKVEVALSG+ V  E
Sbjct: 252  GSLLQWEARAIAAGRAVSGDTNANESSKSSQGQGFGGTPMPFLGETKVEVALSGMEVKAE 311

Query: 894  DTKPEAGAMKVVPPWLIKQGMNLTSEQRGGLKQDLEMENSSATEGSSDDKKSRVDEKD-- 721
            D+K +  ++KV+PPW+I+QGMNLT+EQRG +KQ+L+ +N S+  G + +KK   DEK   
Sbjct: 312  DSKEDVASLKVLPPWMIRQGMNLTNEQRGEVKQELKPDNISSFMGPAVEKKPTDDEKGNI 371

Query: 720  EKSIQDEYVKAYYXXXXXXXXXXXXXXXXXXXXXXETNDISNEEIPSDRRVGLKSRREEN 541
            ++++Q+EY+KAYY                           + EE PS+RRVG+K++REE+
Sbjct: 372  QQNLQEEYLKAYYAAIFKQQQEAEAAATAAAA-------AAAEEKPSERRVGMKAKREED 424

Query: 540  GSDAVVWEEAPTSG 499
              + V WEE  T+G
Sbjct: 425  -DEGVEWEEPRTTG 437


>ref|XP_002314760.1| predicted protein [Populus trichocarpa] gi|222863800|gb|EEF00931.1|
            predicted protein [Populus trichocarpa]
          Length = 429

 Score =  151 bits (381), Expect = 3e-34
 Identities = 93/211 (44%), Positives = 121/211 (57%), Gaps = 4/211 (1%)
 Frame = -2

Query: 1074 GSLQAWEXXXXXXXXXANGDPSVNDPSRSSLGQGFSGTPMPYVGETKVEVALSGVAVMEE 895
            GSLQAW+          NGDP+ +D  + S G G+ GTPMP++GETKVEVA +G    +E
Sbjct: 218  GSLQAWQLHENAAGRATNGDPNSDDHFKYSQGPGYGGTPMPFLGETKVEVAFAGDE-SKE 276

Query: 894  DTKPEAGA--MKVVPPWLIKQGMNLTSEQRGGLKQDLEMENSSATEGSSDDKKSRVDEKD 721
            + K E  +  +KV+PPW+IKQGMNLT EQRG +KQ+ +M++SS     SD+K        
Sbjct: 277  NIKSETASTSLKVLPPWMIKQGMNLTKEQRGEVKQESKMDSSSTAVEFSDEK-------- 328

Query: 720  EKSIQDEYVKAYYXXXXXXXXXXXXXXXXXXXXXXETNDISNEEIPSDRRVGLKSRREE- 544
             KS ++EYVKAYY                       +      E  S+R+VG+KS+REE 
Sbjct: 329  -KSAKEEYVKAYYAALLEQQRQAEESAKQQQELSQTSMSNGLSESSSNRQVGMKSKREEG 387

Query: 543  NGSDAVVWEEAPTSGRGS-KLYDLNVEANAS 454
             G D V WEEAP  G  S +L DLN EA AS
Sbjct: 388  EGDDDVEWEEAPIEGNESYRLNDLNDEAPAS 418