BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009765
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...   134   2e-29
ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [S...   130   1e-28
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   125   4e-27
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   125   4e-27
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   122   5e-26

>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score =  134 bits (336), Expect = 2e-29
 Identities = 74/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)
 Frame = -2

Query: 597 PDVLCLSETKATGKRMEMVRKHLKYQGSHVVPADGRKGGLTVLWKEDCNVNILAATQ-NY 421
           PD+L L ETK +  R +   K L Y    ++PA G++GG+ ++WK D  +   A  Q N+
Sbjct: 29  PDLLILLETKCSSLRADQATKRLGYVNFRIIPAFGKRGGIWLMWKADIALVHYADYQPNH 88

Query: 420 ITGKVTNFGCSSSWIFTFVYGEPISHNRKRVWDDLTNAAHHIVDPWVLFGDFNAITSLDE 241
                         + T ++   +   R + W DLT  +     PW++ GD N +   +E
Sbjct: 89  FHALFKLRSDIPEVLLTGMHAPSVVSERNKYWVDLTEDSPPRGTPWLVAGDMNEVLHGNE 148

Query: 240 KDGGRKVINRSMVEFNDFINGIGLIDLGYRGSKFTWCNNRTYGSHILERLDRALATPSWL 61
           K GGR+V      +  D+I    L+DLG++G KFTW N RT GS I ERLDRAL    WL
Sbjct: 149 KMGGRQVGKEQGKQCKDWIAANALLDLGFQGPKFTWTNGRTGGSLIKERLDRALVNSEWL 208

Query: 60  ELFPEAKVTTVPNVNSDH 7
           +LFP+ KV  +P   SDH
Sbjct: 209 DLFPDTKVIHLPRTFSDH 226


>ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [Sorghum bicolor]
           gi|241941722|gb|EES14867.1| hypothetical protein
           SORBIDRAFT_07g013775 [Sorghum bicolor]
          Length = 589

 Score =  130 bits (328), Expect = 1e-28
 Identities = 77/202 (38%), Positives = 110/202 (54%), Gaps = 3/202 (1%)
 Frame = -2

Query: 597 PDVLCLSETKATGKRMEMVRKHLKYQGSHVVPADGRKGGLTVLWKEDCNVNILAATQNYI 418
           PD++ LSETK+  KRM ++R  L ++   VV   G+ GGL VLW+   +V + + ++N+I
Sbjct: 275 PDMMLLSETKSDEKRMRVLRMKLGFENMEVVDCVGKGGGLAVLWRRGVDVVLRSKSKNHI 334

Query: 417 TGKVTNFGCSSSWIFTFVYGEPISHNRKRVWDDLTN--AAHHIVDPWVLFGDFNAITSLD 244
             +V+     + W FT +YGEP    + + W  L +  A H     W+  GDFN +    
Sbjct: 335 DMEVSETR-GNPWRFTGIYGEPQEAMKWKTWQLLQDLAAQHQNNQAWLCAGDFNEVLYQH 393

Query: 243 EKDGGRKVINRSMVEFNDFINGIGLIDLGYRGSKFTWCNNRTYG-SHILERLDRALATPS 67
           EK+GG      SM  F   +    L DLG+ G+ FTW N ++ G SHI ERLDRA+A   
Sbjct: 394 EKEGGVPRPQNSMDRFKQALEVSELHDLGFEGNVFTWRNKQSKGESHIRERLDRAVANFE 453

Query: 66  WLELFPEAKVTTVPNVNSDHLA 1
           WL  FP  +V      +SDH A
Sbjct: 454 WLAKFPLVRVKNGDTYHSDHRA 475


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  125 bits (315), Expect = 4e-27
 Identities = 75/200 (37%), Positives = 105/200 (52%), Gaps = 1/200 (0%)
 Frame = -2

Query: 597 PDVLCLSETKATGKRMEMVRKHLKYQGSHVVPADGRKGGLTVLWKEDC-NVNILAATQNY 421
           PD L +SETK T   +E  ++ L + G+  V   GR GGL + WKE+  +  +++ +QN+
Sbjct: 29  PDSLFMSETKVTKNIVEQKKESLGFSGAFGVSCVGRAGGLCMFWKEETISFRMVSFSQNH 88

Query: 420 ITGKVTNFGCSSSWIFTFVYGEPISHNRKRVWDDLTNAAHHIVDPWVLFGDFNAITSLDE 241
           I G V + G    W F  +YG P   N+ + W  +         P V  GDFN I S DE
Sbjct: 89  ICGDVGSNG-DVRWRFVGIYGWPEEENKHKTWALIKGLCDEYEGPIVFGGDFNEILSYDE 147

Query: 240 KDGGRKVINRSMVEFNDFINGIGLIDLGYRGSKFTWCNNRTYGSHILERLDRALATPSWL 61
           K+GG     R++V F + ++   L DL + G   TW   R+  S I ERLDR + + SWL
Sbjct: 148 KEGGASRERRAIVGFRNVMDDCSLGDLRFVGQWHTWERGRSPESRIRERLDRFIVSRSWL 207

Query: 60  ELFPEAKVTTVPNVNSDHLA 1
            LFPEA +       SDH A
Sbjct: 208 HLFPEAFIDHQVRYCSDHAA 227


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score =  125 bits (315), Expect = 4e-27
 Identities = 67/197 (34%), Positives = 101/197 (51%)
 Frame = -2

Query: 597 PDVLCLSETKATGKRMEMVRKHLKYQGSHVVPADGRKGGLTVLWKEDCNVNILAATQNYI 418
           P+V+ L ETK     +E V  HL +   H V   G+ GGL ++WK+   + +L + +  I
Sbjct: 29  PEVIFLCETKKRRNYLENVVGHLGFFDLHTVEPIGKSGGLALMWKDSVQIKVLQSDKRLI 88

Query: 417 TGKVTNFGCSSSWIFTFVYGEPISHNRKRVWDDLTNAAHHIVDPWVLFGDFNAITSLDEK 238
              +        +  T +YGEP+   R  +W+ LT        PW+L GDFN +    EK
Sbjct: 89  DALL--IWQDKEFYLTCIYGEPVQAERGELWERLTRLGLSRSGPWMLTGDFNELVDPSEK 146

Query: 237 DGGRKVINRSMVEFNDFINGIGLIDLGYRGSKFTWCNNRTYGSHILERLDRALATPSWLE 58
            GG      S +EF   +N  GL ++ + G +F+W  NR     +  RLDR +A  +W+E
Sbjct: 147 IGGPARKESSCLEFRQMLNSCGLWEVNHSGYQFSWYGNRN-DELVQCRLDRTVANQAWME 205

Query: 57  LFPEAKVTTVPNVNSDH 7
           LFP+AK T +  + SDH
Sbjct: 206 LFPQAKATYLQKICSDH 222


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  122 bits (306), Expect = 5e-26
 Identities = 68/199 (34%), Positives = 106/199 (53%)
 Frame = -2

Query: 597 PDVLCLSETKATGKRMEMVRKHLKYQGSHVVPADGRKGGLTVLWKEDCNVNILAATQNYI 418
           PD++ +SET      +E ++  L +  +  V + GR GGL + WKE+   ++++ +Q++I
Sbjct: 29  PDIIFVSETMINKIEVEALKSWLGFSNAFGVASVGRAGGLCLYWKEEVMFSLVSFSQHHI 88

Query: 417 TGKVTNFGCSSSWIFTFVYGEPISHNRKRVWDDLTNAAHHIVDPWVLFGDFNAITSLDEK 238
            G V +   +  W F  VYG      +   W  L +       P +L GDFN I S  EK
Sbjct: 89  CGDVEDG--NKKWRFVGVYGWAKEEEKHLTWSLLRHLCEDTSLPILLGGDFNEILSAAEK 146

Query: 237 DGGRKVINRSMVEFNDFINGIGLIDLGYRGSKFTWCNNRTYGSHILERLDRALATPSWLE 58
           +GG   + R M+ F D ++ + L DLGY G+ +TW   R+  + I ERLDR L + SWL+
Sbjct: 147 EGGANRVRREMINFRDTLDTLALRDLGYVGTWYTWERGRSPSTCIRERLDRYLCSNSWLD 206

Query: 57  LFPEAKVTTVPNVNSDHLA 1
           L+P++         SDH A
Sbjct: 207 LYPDSVPEHTIRYKSDHSA 225