BLASTX nr result
ID: Coptis25_contig00009747
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00009747 (413 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002319481.1| predicted protein [Populus trichocarpa] gi|2... 108 4e-22 gb|ABK94876.1| unknown [Populus trichocarpa] 108 4e-22 ref|XP_002277564.1| PREDICTED: NHL repeat-containing protein 2-l... 107 1e-21 emb|CAN61591.1| hypothetical protein VITISV_030553 [Vitis vinifera] 107 1e-21 ref|XP_002891968.1| hypothetical protein ARALYDRAFT_892829 [Arab... 98 6e-19 >ref|XP_002319481.1| predicted protein [Populus trichocarpa] gi|222857857|gb|EEE95404.1| predicted protein [Populus trichocarpa] Length = 1065 Score = 108 bits (270), Expect = 4e-22 Identities = 62/123 (50%), Positives = 78/123 (63%), Gaps = 8/123 (6%) Frame = +3 Query: 69 KLSSPYYPQSFKQFRPTIFF--SLLQRRKQTQPQTPFSSRQNRNTI------ITCCLKLE 224 KL SP S +F ++FF S + K R+++N + + C+K+E Sbjct: 9 KLLSPPSSLSSPRFAKSLFFFTSNPKGSKPISSLVQLFQRRSKNLVFNKKMEVKACVKVE 68 Query: 225 NSNAIETEEEKNTWGKVSAVLFDMDGVLCDSEESSRLAGVDVFAEMGVQVTTQDFIPFMG 404 + ETE N WGKVSAVLFDMDGVLC+SEE SR+AGVDVFAEMGV+VT DF+PFMG Sbjct: 69 QKS--ETEVTGNEWGKVSAVLFDMDGVLCNSEEPSRMAGVDVFAEMGVEVTVDDFVPFMG 126 Query: 405 TGE 413 TGE Sbjct: 127 TGE 129 >gb|ABK94876.1| unknown [Populus trichocarpa] Length = 308 Score = 108 bits (270), Expect = 4e-22 Identities = 62/123 (50%), Positives = 78/123 (63%), Gaps = 8/123 (6%) Frame = +3 Query: 69 KLSSPYYPQSFKQFRPTIFF--SLLQRRKQTQPQTPFSSRQNRNTI------ITCCLKLE 224 KL SP S +F ++FF S + K R+++N + + C+K+E Sbjct: 9 KLLSPPSSLSSPRFAKSLFFFTSNPKGSKPISSLVQLFQRRSKNLVFNKKMEVKACVKVE 68 Query: 225 NSNAIETEEEKNTWGKVSAVLFDMDGVLCDSEESSRLAGVDVFAEMGVQVTTQDFIPFMG 404 + ETE N WGKVSAVLFDMDGVLC+SEE SR+AGVDVFAEMGV+VT DF+PFMG Sbjct: 69 QKS--ETEVTGNEWGKVSAVLFDMDGVLCNSEEPSRMAGVDVFAEMGVEVTVDDFVPFMG 126 Query: 405 TGE 413 TGE Sbjct: 127 TGE 129 >ref|XP_002277564.1| PREDICTED: NHL repeat-containing protein 2-like [Vitis vinifera] Length = 1078 Score = 107 bits (267), Expect = 1e-21 Identities = 55/80 (68%), Positives = 60/80 (75%) Frame = +3 Query: 174 SSRQNRNTIITCCLKLENSNAIETEEEKNTWGKVSAVLFDMDGVLCDSEESSRLAGVDVF 353 S R R C+KLE N ET K+ WGKVSAVLFDMDGVLC+SEE SR AGVDVF Sbjct: 39 SLRHRRTAAPKACVKLEEKNVPETG--KSQWGKVSAVLFDMDGVLCNSEEPSRRAGVDVF 96 Query: 354 AEMGVQVTTQDFIPFMGTGE 413 EMGVQVTT+DF+PFMGTGE Sbjct: 97 HEMGVQVTTEDFVPFMGTGE 116 >emb|CAN61591.1| hypothetical protein VITISV_030553 [Vitis vinifera] Length = 659 Score = 107 bits (267), Expect = 1e-21 Identities = 55/80 (68%), Positives = 60/80 (75%) Frame = +3 Query: 174 SSRQNRNTIITCCLKLENSNAIETEEEKNTWGKVSAVLFDMDGVLCDSEESSRLAGVDVF 353 S R R C+KLE N ET K+ WGKVSAVLFDMDGVLC+SEE SR AGVDVF Sbjct: 39 SLRHRRTAAPKACVKLEEKNVPETG--KSQWGKVSAVLFDMDGVLCNSEEPSRRAGVDVF 96 Query: 354 AEMGVQVTTQDFIPFMGTGE 413 EMGVQVTT+DF+PFMGTGE Sbjct: 97 HEMGVQVTTEDFVPFMGTGE 116 >ref|XP_002891968.1| hypothetical protein ARALYDRAFT_892829 [Arabidopsis lyrata subsp. lyrata] gi|297337810|gb|EFH68227.1| hypothetical protein ARALYDRAFT_892829 [Arabidopsis lyrata subsp. lyrata] Length = 1058 Score = 98.2 bits (243), Expect = 6e-19 Identities = 57/122 (46%), Positives = 72/122 (59%), Gaps = 7/122 (5%) Frame = +3 Query: 69 KLSSPYYPQSFKQFRPTIFFSLLQRRKQTQPQTPFSSRQNRNTIITCCLKLENSNAIETE 248 KL+SP P F Q R S+ R K T + F+ +++ + L +S+ + Sbjct: 4 KLTSP--PSIFSQSRRLSSSSIPIRSKSTSRPSSFTGFRSKTGVYLTKTALPSSSKLNVA 61 Query: 249 EEK-------NTWGKVSAVLFDMDGVLCDSEESSRLAGVDVFAEMGVQVTTQDFIPFMGT 407 E WGKVSAVLFDMDGVLC+SE+ SR A VDVFAEMGV+VT DF+PFMGT Sbjct: 62 AESPPATIATEDWGKVSAVLFDMDGVLCNSEDLSRRAAVDVFAEMGVEVTVDDFVPFMGT 121 Query: 408 GE 413 GE Sbjct: 122 GE 123