BLASTX nr result

ID: Coptis25_contig00009741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009741
         (1465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277045.1| PREDICTED: protein TRANSPARENT TESTA 1 [Viti...   449   e-124
ref|XP_002305556.1| predicted protein [Populus trichocarpa] gi|2...   416   e-114
ref|XP_002523788.1| TRANSPARENT TESTA 1 protein, putative [Ricin...   405   e-110
ref|XP_003541972.1| PREDICTED: protein TRANSPARENT TESTA 1-like ...   389   e-105
ref|XP_003539466.1| PREDICTED: protein TRANSPARENT TESTA 1-like ...   387   e-105

>ref|XP_002277045.1| PREDICTED: protein TRANSPARENT TESTA 1 [Vitis vinifera]
            gi|147767982|emb|CAN64917.1| hypothetical protein
            VITISV_027337 [Vitis vinifera]
          Length = 347

 Score =  449 bits (1156), Expect = e-124
 Identities = 214/345 (62%), Positives = 243/345 (70%), Gaps = 20/345 (5%)
 Frame = +1

Query: 40   MVIRNYHVNNMDYCFQAPTFTEWLKXXXXXXXXXXXXXXXXXXXDTSTK----------- 186
            M IRNYHV +M+ CFQ PTF EWLK                    +S+            
Sbjct: 1    MGIRNYHVGDMNLCFQPPTFIEWLKPSSSIPPPPPPSSSSSSSSSSSSSFSSSSSVPLQV 60

Query: 187  --------SVLKLPFFYRQEDHDHVLDKKTKCLPLLNRXXXXXXXXXXXXXXXXXXSGIR 342
                    S LKLP FY+Q+    +  + T+CLPLL+R                  +GI+
Sbjct: 61   HQFTNSMISSLKLPLFYQQQQE--LAQETTQCLPLLSRFTETKPLKEEDFGVQKESAGIK 118

Query: 343  DEKLEKVTVTLHIGLPNNEG-FDGVTKPLNYNDDEKTIKKSFEGCSLNTEGRFWIPTPAQ 519
            +EKLEKVTV LHIGLP++ G  D   K  N+ +D++  K SF G S NTE RFWIPTPAQ
Sbjct: 119  EEKLEKVTVALHIGLPSSTGDSDAQNKSFNFKEDQEPTKTSFHGYSFNTESRFWIPTPAQ 178

Query: 520  ILHGPTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRRGPESLKGTQPTTMLKLPCYCCAHG 699
            IL GP QF+CS+CSKTFNRYNNMQMHMWGHGS+YR+GPESL+G QP  ML+LPCYCCA G
Sbjct: 179  ILVGPMQFACSICSKTFNRYNNMQMHMWGHGSEYRKGPESLRGAQPAAMLRLPCYCCAQG 238

Query: 700  CKNNINHPRAKPLKDFRTLQTHYKRKHGAKPFSCRKCGKLFAVKGDWRTHEKNCGKLWY* 879
            CKNNINHPRAKPLKDFRTLQTHYKRKHGAKPF CRKCGK FAVKGDWRTHEKNCGKLWY 
Sbjct: 239  CKNNINHPRAKPLKDFRTLQTHYKRKHGAKPFMCRKCGKTFAVKGDWRTHEKNCGKLWYC 298

Query: 880  TCSSDFKHKRSLKDHIRSFGDGHTPHPCHQSFEEEKECITGSEDE 1014
            TC SDFKHKRSLKDHIRSFG GH+PHP H+ F++EKECITGSEDE
Sbjct: 299  TCGSDFKHKRSLKDHIRSFGKGHSPHPSHEGFDDEKECITGSEDE 343


>ref|XP_002305556.1| predicted protein [Populus trichocarpa] gi|222848520|gb|EEE86067.1|
            predicted protein [Populus trichocarpa]
          Length = 333

 Score =  416 bits (1070), Expect = e-114
 Identities = 202/333 (60%), Positives = 237/333 (71%), Gaps = 8/333 (2%)
 Frame = +1

Query: 40   MVIRNYHVNNMDYCFQAPTFTEWLKXXXXXXXXXXXXXXXXXXXD-----TSTKSVLKLP 204
            M + NYHV + + CFQAP F EWLK                         T+  SVL+LP
Sbjct: 1    MGLCNYHVEDKNLCFQAPNFIEWLKPSSSPSPSSSSSSLSNSSVTQQVQLTNPMSVLRLP 60

Query: 205  FFYRQEDHDH--VLDKKTKCLPLLNRXXXXXXXXXXXXXXXXXXSGIRDEKLEKVTVTLH 378
              + Q+ H     + +  +CLPLL+R                   G+++EK  +VTV LH
Sbjct: 61   SLFPQQQHQQREAMKETIQCLPLLSRFTEKKTLKDGDMEVKESTVGVKEEK--EVTVALH 118

Query: 379  IGLPNNEGFDGVTKPLNYNDDEKTIKKSFEGCSLNTEGRFWIPTPAQILHGPTQFSCSVC 558
            IGLPN+   +  T+ L+  + E ++KK+F+G S N+E RFWIPTPAQIL GP QF+CS+C
Sbjct: 119  IGLPNSGDSEVETEVLDLKE-EISMKKNFQGYSFNSESRFWIPTPAQILVGPMQFACSIC 177

Query: 559  SKTFNRYNNMQMHMWGHGSQYRRGPESLKGTQPTTMLKLPCYCCAHGCKNNINHPRAKPL 738
            SKTFNRYNNMQMHMWGHGS++R+GP+SLKGTQP  ML+LPCYCCA GCKNNINHPRAKPL
Sbjct: 178  SKTFNRYNNMQMHMWGHGSEFRKGPDSLKGTQPAAMLRLPCYCCAQGCKNNINHPRAKPL 237

Query: 739  KDFRTLQTHYKRKHGAKPFSCRKCGKLFAVKGDWRTHEKNCGKLWY*TCSSDFKHKRSLK 918
            KDFRTLQTHYKRKHGAKPF CRKC K FAVKGDWRTHEKNCGKLWY TC SDFKHKRSLK
Sbjct: 238  KDFRTLQTHYKRKHGAKPFMCRKCSKTFAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLK 297

Query: 919  DHIRSFGDGHTPHPCHQSFEE-EKECITGSEDE 1014
            DHIRSFG GH+PHP  + FEE +KECITGSEDE
Sbjct: 298  DHIRSFGKGHSPHPSLEGFEEIDKECITGSEDE 330


>ref|XP_002523788.1| TRANSPARENT TESTA 1 protein, putative [Ricinus communis]
            gi|223536876|gb|EEF38514.1| TRANSPARENT TESTA 1 protein,
            putative [Ricinus communis]
          Length = 343

 Score =  405 bits (1040), Expect = e-110
 Identities = 200/343 (58%), Positives = 232/343 (67%), Gaps = 18/343 (5%)
 Frame = +1

Query: 40   MVIRNYHV-NNMDYCFQAPTFTEWLKXXXXXXXXXXXXXXXXXXXD-----TSTKSVLKL 201
            M + NYHV +N + CFQ PTF EWLK                           + ++LKL
Sbjct: 1    MGLWNYHVQDNTNLCFQPPTFIEWLKPSSSSVTSSSSSSSCSSATQQVQLTNPSMTILKL 60

Query: 202  PFFYRQ--EDHDHVLDKKTKCLPLLNRXXXXXXXXXXXXXXXXXXSGIRDEKLEKVTVTL 375
            P  Y Q  E+ D  + +  +CLPL                     S +++EK+++VTV L
Sbjct: 61   PLLYPQQLENQDQFVKETIQCLPLFTEKEELKEEENMEVQE----SVVKEEKIDQVTVAL 116

Query: 376  HIGLPNNEGFDG--------VTKPLNYNDDEKTIKKSFEGCSLNTEGRFWIPTPAQILHG 531
            HIGLPN    D         V++     +    IKKSF GC+ N E RFWIPTPAQIL G
Sbjct: 117  HIGLPNTSSGDSDLDQVETKVSQEKQEQEQPFMIKKSFHGCTFNAESRFWIPTPAQILVG 176

Query: 532  PTQFSCSVCSKTFNRYNNMQMHMWGHGSQYRRGPESLKGTQPTTMLKLPCYCCAHGCKNN 711
            P QF CS+CSKTFNRYNNMQMHMWGHGS++RRGP+SL+GTQP  ML+LPCYCCA GCKNN
Sbjct: 177  PMQFECSICSKTFNRYNNMQMHMWGHGSEFRRGPDSLRGTQPAAMLRLPCYCCAQGCKNN 236

Query: 712  INHPRAKPLKDFRTLQTHYKRKHGAKPFSCRKCGKLFAVKGDWRTHEKNCGKLWY*TCSS 891
            INHPRAKPLKDFRTLQTHYKRKHGAKPF CRKCGK FAVKGDWRTHEKNCGKLWY TC S
Sbjct: 237  INHPRAKPLKDFRTLQTHYKRKHGAKPFMCRKCGKTFAVKGDWRTHEKNCGKLWYCTCGS 296

Query: 892  DFKHKRSLKDHIRSFGDGHTPHPCHQSFE-EEKECI-TGSEDE 1014
            DFKHKRSLKDHIRSFG GH+PHP  + FE ++KECI TGSE++
Sbjct: 297  DFKHKRSLKDHIRSFGKGHSPHPSLEGFEDDQKECITTGSEED 339


>ref|XP_003541972.1| PREDICTED: protein TRANSPARENT TESTA 1-like [Glycine max]
          Length = 319

 Score =  389 bits (999), Expect = e-105
 Identities = 192/329 (58%), Positives = 222/329 (67%), Gaps = 10/329 (3%)
 Frame = +1

Query: 58   HVNNMDYCFQAPTFTEWLKXXXXXXXXXXXXXXXXXXXDTSTKSVLKLPFFYRQEDHDH- 234
            +V N + C Q PTF EWLK                    + T S+   P  Y    H+  
Sbjct: 8    NVENKNLCLQTPTFIEWLK---------------PSSSSSQTSSISSSPPSYSLIQHEQL 52

Query: 235  VLDKKTKCLPLLNRXXXXXXXXXXXXXXXXXXSGIRDEKLEKVTVTLHIGLPNNEGFD-- 408
            V D+  + LP                          ++K+E+VTV LHIGLPN  G +  
Sbjct: 53   VQDQTIQFLPFKEDQHIGVQKEGLEVK--------EEKKVEQVTVALHIGLPNTRGHEPD 104

Query: 409  -----GVTKPLNYNDDEKTIKKSFEG-CSLNTEGRFWIPTPAQILHGPTQFSCSVCSKTF 570
                    K  +  ++E+ +KKSF+G CS N E RFWIPTPAQIL GP QF+CS+CSK+F
Sbjct: 105  DDHDADEKKLFHVKEEEEPLKKSFQGNCSFNQERRFWIPTPAQILVGPMQFACSICSKSF 164

Query: 571  NRYNNMQMHMWGHGSQYRRGPESLKGTQPTTMLKLPCYCCAHGCKNNINHPRAKPLKDFR 750
            NRYNNMQMHMWGHGS++R+GPESLKGTQP  ML+LPCYCCA GCKNNINHPRAKPLKDFR
Sbjct: 165  NRYNNMQMHMWGHGSEFRKGPESLKGTQPAAMLRLPCYCCAQGCKNNINHPRAKPLKDFR 224

Query: 751  TLQTHYKRKHGAKPFSCRKCGKLFAVKGDWRTHEKNCGKLWY*TCSSDFKHKRSLKDHIR 930
            TLQTHYKRKHGAKPF CRKC K FAVKGDWRTHEKNCGKLWY TC SDFKHKRSLKDHIR
Sbjct: 225  TLQTHYKRKHGAKPFMCRKCSKSFAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIR 284

Query: 931  SFGDGHTPHPCHQSF-EEEKECITGSEDE 1014
            SFG GH+PHP  + F E+EKEC+TGS+DE
Sbjct: 285  SFGKGHSPHPSLEGFVEDEKECVTGSDDE 313


>ref|XP_003539466.1| PREDICTED: protein TRANSPARENT TESTA 1-like [Glycine max]
          Length = 321

 Score =  387 bits (994), Expect = e-105
 Identities = 189/331 (57%), Positives = 219/331 (66%), Gaps = 12/331 (3%)
 Frame = +1

Query: 58   HVNNMDYCFQAPTFTEWLKXXXXXXXXXXXXXXXXXXXDTSTKSVLKLPFFYRQEDHDHV 237
            +V N + C Q PTF EWLK                    + T  +   P  Y    H+ +
Sbjct: 8    NVENKNLCLQTPTFIEWLKPSSS---------------SSLTSLISSSPPSYSLTQHEQL 52

Query: 238  LDKKTKCLPLLNRXXXXXXXXXXXXXXXXXXSGIRDEKLEKVTVTLHIGLPNNEGFD--- 408
              +  + LP                          ++K+E+VTV LHIGLPN  G D   
Sbjct: 53   AQETIQFLPFKEDQHIRVQKEGFEVK--------EEKKVEQVTVALHIGLPNTGGHDPDD 104

Query: 409  -------GVTKPLNYNDDEKTIKKSFEG-CSLNTEGRFWIPTPAQILHGPTQFSCSVCSK 564
                      K  +  ++E+ +KK F+G CS N E RFWIPTPAQIL GP QF+CS+CSK
Sbjct: 105  DNDHDADDEKKVFHVKEEEEPLKKGFQGNCSFNQERRFWIPTPAQILVGPMQFACSICSK 164

Query: 565  TFNRYNNMQMHMWGHGSQYRRGPESLKGTQPTTMLKLPCYCCAHGCKNNINHPRAKPLKD 744
            TFNRYNNMQMHMWGHGS++R+GP+SLKGTQP  ML+LPCYCCA GCKNNINHPRAKPLKD
Sbjct: 165  TFNRYNNMQMHMWGHGSEFRKGPDSLKGTQPAAMLRLPCYCCAQGCKNNINHPRAKPLKD 224

Query: 745  FRTLQTHYKRKHGAKPFSCRKCGKLFAVKGDWRTHEKNCGKLWY*TCSSDFKHKRSLKDH 924
            FRTLQTHYKRKHGAKPF CRKC K FAVKGDWRTHEKNCGKLWY TC SDFKHKRSLKDH
Sbjct: 225  FRTLQTHYKRKHGAKPFMCRKCSKSFAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDH 284

Query: 925  IRSFGDGHTPHPCHQSF-EEEKECITGSEDE 1014
            IRSFG GH+PHP  + F E+EKEC+TGS+DE
Sbjct: 285  IRSFGKGHSPHPSLEGFVEDEKECVTGSDDE 315


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