BLASTX nr result
ID: Coptis25_contig00009736
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00009736 (216 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002312968.1| predicted protein [Populus trichocarpa] gi|2... 82 6e-14 ref|XP_002314389.1| predicted protein [Populus trichocarpa] gi|2... 75 5e-12 ref|XP_002333859.1| predicted protein [Populus trichocarpa] gi|2... 75 5e-12 emb|CAN70827.1| hypothetical protein VITISV_029099 [Vitis vinifera] 72 4e-11 emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera] 72 5e-11 >ref|XP_002312968.1| predicted protein [Populus trichocarpa] gi|222849376|gb|EEE86923.1| predicted protein [Populus trichocarpa] Length = 371 Score = 81.6 bits (200), Expect = 6e-14 Identities = 37/71 (52%), Positives = 52/71 (73%), Gaps = 1/71 (1%) Frame = +3 Query: 6 TTALVEDL-VGIVSDCGVCCFNISCQDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVKM 182 T A+V D V IV D G C N++CQDT WV D+ ASYHVTP F+T+Y+ G++G+V+M Sbjct: 273 TAAVVSDGDVAIVCDDG--CVNLACQDTTWVADSAASYHVTPRHDFYTSYTAGDFGQVRM 330 Query: 183 GNSGVSKIIGI 215 GN G++ ++GI Sbjct: 331 GNQGMASVVGI 341 >ref|XP_002314389.1| predicted protein [Populus trichocarpa] gi|222863429|gb|EEF00560.1| predicted protein [Populus trichocarpa] Length = 341 Score = 75.1 bits (183), Expect = 5e-12 Identities = 28/56 (50%), Positives = 42/56 (75%) Frame = +3 Query: 48 CGVCCFNISCQDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVKMGNSGVSKIIGI 215 C C N++CQDT WV D+ ASYHVTP R F+T+Y+ ++G+V+MGN ++ ++GI Sbjct: 286 CDDSCVNLACQDTTWVADSAASYHVTPRRDFYTSYTACDFGQVRMGNQSMANVVGI 341 >ref|XP_002333859.1| predicted protein [Populus trichocarpa] gi|222838791|gb|EEE77142.1| predicted protein [Populus trichocarpa] Length = 207 Score = 75.1 bits (183), Expect = 5e-12 Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 1/68 (1%) Frame = +3 Query: 6 TTALVEDL-VGIVSDCGVCCFNISCQDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVKM 182 T A+V D V IV D G C N++CQDT WV D+ ASYHVTP R F+T+Y+ G++G+V+M Sbjct: 140 TAAVVFDGDVAIVCDDG--CVNLACQDTTWVADSAASYHVTPRRDFYTSYTAGDFGQVRM 197 Query: 183 GNSGVSKI 206 GN V I Sbjct: 198 GNCNVLNI 205 >emb|CAN70827.1| hypothetical protein VITISV_029099 [Vitis vinifera] Length = 649 Score = 72.4 bits (176), Expect = 4e-11 Identities = 29/50 (58%), Positives = 39/50 (78%) Frame = +3 Query: 66 NISCQDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVKMGNSGVSKIIGI 215 N SCQ+T WVID+GAS H TP + FFT+Y+ G++G V+MGN G +K IG+ Sbjct: 239 NFSCQETSWVIDSGASIHATPRKDFFTSYTSGDFGSVRMGNDGSAKAIGM 288 >emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera] Length = 776 Score = 72.0 bits (175), Expect = 5e-11 Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 6/71 (8%) Frame = +3 Query: 21 EDLVGIVSD------CGVCCFNISCQDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVKM 182 +D+V + SD C C N++CQD+ WV+DT S+H+T H+ FF++Y+ G +G V+M Sbjct: 345 KDIVVVASDGDTTIVCDDACVNLACQDSTWVVDTAMSFHITTHKDFFSSYTSGSFGWVRM 404 Query: 183 GNSGVSKIIGI 215 GN +I+G+ Sbjct: 405 GNEAKCEIVGM 415