BLASTX nr result
ID: Coptis25_contig00009735
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00009735 (205 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002312968.1| predicted protein [Populus trichocarpa] gi|2... 79 4e-13 ref|XP_002314389.1| predicted protein [Populus trichocarpa] gi|2... 74 1e-11 ref|XP_002333859.1| predicted protein [Populus trichocarpa] gi|2... 74 2e-11 emb|CAN70827.1| hypothetical protein VITISV_029099 [Vitis vinifera] 72 6e-11 emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera] 71 1e-10 >ref|XP_002312968.1| predicted protein [Populus trichocarpa] gi|222849376|gb|EEE86923.1| predicted protein [Populus trichocarpa] Length = 371 Score = 79.0 bits (193), Expect = 4e-13 Identities = 33/62 (53%), Positives = 47/62 (75%) Frame = +1 Query: 19 VGIVSDCGVCCLSTSCQDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVRMGNSGVSKII 198 V IV D G C++ +CQDT WV D+ ASYHVTP F+T+Y+ G++G+VRMGN G++ ++ Sbjct: 282 VAIVCDDG--CVNLACQDTTWVADSAASYHVTPRHDFYTSYTAGDFGQVRMGNQGMASVV 339 Query: 199 GI 204 GI Sbjct: 340 GI 341 >ref|XP_002314389.1| predicted protein [Populus trichocarpa] gi|222863429|gb|EEF00560.1| predicted protein [Populus trichocarpa] Length = 341 Score = 73.9 bits (180), Expect = 1e-11 Identities = 28/56 (50%), Positives = 42/56 (75%) Frame = +1 Query: 37 CGVCCLSTSCQDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVRMGNSGVSKIIGI 204 C C++ +CQDT WV D+ ASYHVTP R F+T+Y+ ++G+VRMGN ++ ++GI Sbjct: 286 CDDSCVNLACQDTTWVADSAASYHVTPRRDFYTSYTACDFGQVRMGNQSMANVVGI 341 >ref|XP_002333859.1| predicted protein [Populus trichocarpa] gi|222838791|gb|EEE77142.1| predicted protein [Populus trichocarpa] Length = 207 Score = 73.6 bits (179), Expect = 2e-11 Identities = 33/59 (55%), Positives = 43/59 (72%) Frame = +1 Query: 19 VGIVSDCGVCCLSTSCQDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVRMGNSGVSKI 195 V IV D G C++ +CQDT WV D+ ASYHVTP R F+T+Y+ G++G+VRMGN V I Sbjct: 149 VAIVCDDG--CVNLACQDTTWVADSAASYHVTPRRDFYTSYTAGDFGQVRMGNCNVLNI 205 >emb|CAN70827.1| hypothetical protein VITISV_029099 [Vitis vinifera] Length = 649 Score = 71.6 bits (174), Expect = 6e-11 Identities = 33/60 (55%), Positives = 44/60 (73%) Frame = +1 Query: 25 IVSDCGVCCLSTSCQDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVRMGNSGVSKIIGI 204 IV D V ++ SCQ+T WVID+GAS H TP + FFT+Y+ G++G VRMGN G +K IG+ Sbjct: 231 IVYDSDV--VNFSCQETSWVIDSGASIHATPRKDFFTSYTSGDFGSVRMGNDGSAKAIGM 288 >emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera] Length = 776 Score = 70.9 bits (172), Expect = 1e-10 Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 6/71 (8%) Frame = +1 Query: 10 EDLVGIVSD------CGVCCLSTSCQDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVRM 171 +D+V + SD C C++ +CQD+ WV+DT S+H+T H+ FF++Y+ G +G VRM Sbjct: 345 KDIVVVASDGDTTIVCDDACVNLACQDSTWVVDTAMSFHITTHKDFFSSYTSGSFGWVRM 404 Query: 172 GNSGVSKIIGI 204 GN +I+G+ Sbjct: 405 GNEAKCEIVGM 415