BLASTX nr result

ID: Coptis25_contig00009735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009735
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312968.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_002314389.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002333859.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
emb|CAN70827.1| hypothetical protein VITISV_029099 [Vitis vinifera]    72   6e-11
emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera]    71   1e-10

>ref|XP_002312968.1| predicted protein [Populus trichocarpa] gi|222849376|gb|EEE86923.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 33/62 (53%), Positives = 47/62 (75%)
 Frame = +1

Query: 19  VGIVSDCGVCCLSTSCQDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVRMGNSGVSKII 198
           V IV D G  C++ +CQDT WV D+ ASYHVTP   F+T+Y+ G++G+VRMGN G++ ++
Sbjct: 282 VAIVCDDG--CVNLACQDTTWVADSAASYHVTPRHDFYTSYTAGDFGQVRMGNQGMASVV 339

Query: 199 GI 204
           GI
Sbjct: 340 GI 341


>ref|XP_002314389.1| predicted protein [Populus trichocarpa] gi|222863429|gb|EEF00560.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 28/56 (50%), Positives = 42/56 (75%)
 Frame = +1

Query: 37  CGVCCLSTSCQDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVRMGNSGVSKIIGI 204
           C   C++ +CQDT WV D+ ASYHVTP R F+T+Y+  ++G+VRMGN  ++ ++GI
Sbjct: 286 CDDSCVNLACQDTTWVADSAASYHVTPRRDFYTSYTACDFGQVRMGNQSMANVVGI 341


>ref|XP_002333859.1| predicted protein [Populus trichocarpa] gi|222838791|gb|EEE77142.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/59 (55%), Positives = 43/59 (72%)
 Frame = +1

Query: 19  VGIVSDCGVCCLSTSCQDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVRMGNSGVSKI 195
           V IV D G  C++ +CQDT WV D+ ASYHVTP R F+T+Y+ G++G+VRMGN  V  I
Sbjct: 149 VAIVCDDG--CVNLACQDTTWVADSAASYHVTPRRDFYTSYTAGDFGQVRMGNCNVLNI 205


>emb|CAN70827.1| hypothetical protein VITISV_029099 [Vitis vinifera]
          Length = 649

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/60 (55%), Positives = 44/60 (73%)
 Frame = +1

Query: 25  IVSDCGVCCLSTSCQDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVRMGNSGVSKIIGI 204
           IV D  V  ++ SCQ+T WVID+GAS H TP + FFT+Y+ G++G VRMGN G +K IG+
Sbjct: 231 IVYDSDV--VNFSCQETSWVIDSGASIHATPRKDFFTSYTSGDFGSVRMGNDGSAKAIGM 288


>emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera]
          Length = 776

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
 Frame = +1

Query: 10  EDLVGIVSD------CGVCCLSTSCQDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVRM 171
           +D+V + SD      C   C++ +CQD+ WV+DT  S+H+T H+ FF++Y+ G +G VRM
Sbjct: 345 KDIVVVASDGDTTIVCDDACVNLACQDSTWVVDTAMSFHITTHKDFFSSYTSGSFGWVRM 404

Query: 172 GNSGVSKIIGI 204
           GN    +I+G+
Sbjct: 405 GNEAKCEIVGM 415


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