BLASTX nr result
ID: Coptis25_contig00009734
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00009734 (264 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK44959.1| unknown [Lotus japonicus] 83 2e-14 gb|ACU23298.1| unknown [Glycine max] 83 2e-14 ref|XP_004162895.1| PREDICTED: uncharacterized LOC101222348 isof... 80 1e-13 ref|XP_004148806.1| PREDICTED: uncharacterized protein LOC101222... 80 1e-13 ref|XP_003592143.1| RNA-binding protein with multiple splicing [... 75 4e-12 >gb|AFK44959.1| unknown [Lotus japonicus] Length = 239 Score = 83.2 bits (204), Expect = 2e-14 Identities = 39/63 (61%), Positives = 47/63 (74%) Frame = +3 Query: 75 MGAPRSVGSDMLPNGRGVVGFNGQLPADAIGRPGHEGLPLPPDATNTLYIEGLPPDSTKR 254 MG G D+ PNGRG + GQ P D++ RPGHE +PLPPDA++TLY+EGLP DSTKR Sbjct: 96 MGRHGGGGPDIAPNGRGF-NYGGQPPVDSVSRPGHETVPLPPDASSTLYVEGLPSDSTKR 154 Query: 255 EVA 263 EVA Sbjct: 155 EVA 157 >gb|ACU23298.1| unknown [Glycine max] Length = 242 Score = 83.2 bits (204), Expect = 2e-14 Identities = 40/65 (61%), Positives = 49/65 (75%) Frame = +3 Query: 69 SLMGAPRSVGSDMLPNGRGVVGFNGQLPADAIGRPGHEGLPLPPDATNTLYIEGLPPDST 248 S+MG G D+ PNGRGV + GQLP DA+ RPG E + LPPDA++TLY+EGLP DST Sbjct: 97 SVMGRHGGGGPDLAPNGRGV-NYGGQLPVDAVSRPGPETVSLPPDASSTLYVEGLPSDST 155 Query: 249 KREVA 263 +REVA Sbjct: 156 RREVA 160 >ref|XP_004162895.1| PREDICTED: uncharacterized LOC101222348 isoform 1 [Cucumis sativus] gi|449506964|ref|XP_004162896.1| PREDICTED: uncharacterized LOC101222348 isoform 2 [Cucumis sativus] Length = 257 Score = 80.5 bits (197), Expect = 1e-13 Identities = 36/64 (56%), Positives = 48/64 (75%) Frame = +3 Query: 72 LMGAPRSVGSDMLPNGRGVVGFNGQLPADAIGRPGHEGLPLPPDATNTLYIEGLPPDSTK 251 +M P +V D+ PNGR + + LP D++ RPG E +PLPPDA+NTLY+EGLPPDS++ Sbjct: 113 VMSRPPAVSPDLAPNGRNLE-YGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSR 171 Query: 252 REVA 263 REVA Sbjct: 172 REVA 175 >ref|XP_004148806.1| PREDICTED: uncharacterized protein LOC101222348 isoform 1 [Cucumis sativus] gi|449462156|ref|XP_004148807.1| PREDICTED: uncharacterized protein LOC101222348 isoform 2 [Cucumis sativus] Length = 257 Score = 80.5 bits (197), Expect = 1e-13 Identities = 36/64 (56%), Positives = 48/64 (75%) Frame = +3 Query: 72 LMGAPRSVGSDMLPNGRGVVGFNGQLPADAIGRPGHEGLPLPPDATNTLYIEGLPPDSTK 251 +M P +V D+ PNGR + + LP D++ RPG E +PLPPDA+NTLY+EGLPPDS++ Sbjct: 113 VMSRPPAVSPDLAPNGRNLE-YGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSR 171 Query: 252 REVA 263 REVA Sbjct: 172 REVA 175 >ref|XP_003592143.1| RNA-binding protein with multiple splicing [Medicago truncatula] gi|355481191|gb|AES62394.1| RNA-binding protein with multiple splicing [Medicago truncatula] gi|388515921|gb|AFK46022.1| unknown [Medicago truncatula] Length = 147 Score = 75.5 bits (184), Expect = 4e-12 Identities = 37/56 (66%), Positives = 43/56 (76%) Frame = +3 Query: 96 GSDMLPNGRGVVGFNGQLPADAIGRPGHEGLPLPPDATNTLYIEGLPPDSTKREVA 263 G D+ NGR V F GQLP DA+ RPG E +PLP DA++TLY+EGLP DSTKREVA Sbjct: 10 GPDLSRNGRDV-NFGGQLPIDAVSRPGPETIPLPRDASSTLYVEGLPSDSTKREVA 64