BLASTX nr result

ID: Coptis25_contig00009733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009733
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74250.1| hypothetical protein VITISV_019089 [Vitis vinifera]    65   5e-11
gb|AFK44959.1| unknown [Lotus japonicus]                               69   3e-10
ref|XP_004148806.1| PREDICTED: uncharacterized protein LOC101222...    68   9e-10
ref|XP_003556146.1| PREDICTED: uncharacterized protein LOC100813...    68   9e-10
ref|XP_003556145.1| PREDICTED: uncharacterized protein LOC100813...    68   9e-10

>emb|CAN74250.1| hypothetical protein VITISV_019089 [Vitis vinifera]
          Length = 337

 Score = 65.5 bits (158), Expect(2) = 5e-11
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = -2

Query: 97  IFRPFVGYKEVRLVTKESKHRGGDPLILCFVD 2
           IFRPFVGYKEVRLV+KESKHRG DPL+LCFVD
Sbjct: 219 IFRPFVGYKEVRLVSKESKHRGRDPLVLCFVD 250



 Score = 26.6 bits (57), Expect(2) = 5e-11
 Identities = 11/17 (64%), Positives = 16/17 (94%)
 Frame = -1

Query: 248 STKREVARIL*NIVSLP 198
           ST+REVARIL ++++LP
Sbjct: 195 STRREVARILQDVITLP 211


>gb|AFK44959.1| unknown [Lotus japonicus]
          Length = 239

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 31/32 (96%), Positives = 32/32 (100%)
 Frame = -2

Query: 97  IFRPFVGYKEVRLVTKESKHRGGDPLILCFVD 2
           IFRPFVGY+EVRLVTKESKHRGGDPLILCFVD
Sbjct: 159 IFRPFVGYREVRLVTKESKHRGGDPLILCFVD 190


>ref|XP_004148806.1| PREDICTED: uncharacterized protein LOC101222348 isoform 1 [Cucumis
           sativus] gi|449462156|ref|XP_004148807.1| PREDICTED:
           uncharacterized protein LOC101222348 isoform 2 [Cucumis
           sativus]
          Length = 257

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/32 (93%), Positives = 32/32 (100%)
 Frame = -2

Query: 97  IFRPFVGYKEVRLVTKESKHRGGDPLILCFVD 2
           IFRPFVGYKE+RLV+KESKHRGGDPLILCFVD
Sbjct: 177 IFRPFVGYKELRLVSKESKHRGGDPLILCFVD 208


>ref|XP_003556146.1| PREDICTED: uncharacterized protein LOC100813445 isoform 2 [Glycine
           max]
          Length = 245

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/32 (93%), Positives = 32/32 (100%)
 Frame = -2

Query: 97  IFRPFVGYKEVRLVTKESKHRGGDPLILCFVD 2
           IFRPFVGY+EVRLV+KESKHRGGDPLILCFVD
Sbjct: 165 IFRPFVGYREVRLVSKESKHRGGDPLILCFVD 196


>ref|XP_003556145.1| PREDICTED: uncharacterized protein LOC100813445 isoform 1 [Glycine
           max]
          Length = 252

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/32 (93%), Positives = 32/32 (100%)
 Frame = -2

Query: 97  IFRPFVGYKEVRLVTKESKHRGGDPLILCFVD 2
           IFRPFVGY+EVRLV+KESKHRGGDPLILCFVD
Sbjct: 172 IFRPFVGYREVRLVSKESKHRGGDPLILCFVD 203


Top