BLASTX nr result

ID: Coptis25_contig00009720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009720
         (1191 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271705.1| PREDICTED: uncharacterized protein LOC100258...   114   5e-41
ref|XP_002331872.1| predicted protein [Populus trichocarpa] gi|2...   114   3e-39
emb|CBI30814.3| unnamed protein product [Vitis vinifera]              114   7e-39
emb|CAN65912.1| hypothetical protein VITISV_035567 [Vitis vinifera]   114   2e-26
ref|XP_002519748.1| conserved hypothetical protein [Ricinus comm...   120   7e-25

>ref|XP_002271705.1| PREDICTED: uncharacterized protein LOC100258847 [Vitis vinifera]
          Length = 484

 Score =  114 bits (285), Expect(2) = 5e-41
 Identities = 57/116 (49%), Positives = 75/116 (64%)
 Frame = -2

Query: 350 LAHSKADNDDENGRHSPCDYQTCNITDFNISDMTVTGLPFDGTEEFNDIIEAVPFPNFEC 171
           LA    D+ D+N R S  DYQTCN++DF ISDM V  LP DG   ++DII   PFP+++C
Sbjct: 146 LAQLIGDDSDDNSRSSS-DYQTCNVSDFYISDMIVADLPIDGNSMYDDIIGINPFPDYKC 204

Query: 170 LGQDTIFDMTGRYMILPFLEETVEISSTHDGESCELAMMNSDDTCFYLAIQQMNTC 3
                +FD+  + MILPFLE+T E  + H   SCE AM+ SD++  YLAI QM +C
Sbjct: 205 GEPSMLFDVAEQCMILPFLEDTREARNIHSPTSCEEAMVGSDNSSLYLAIHQMRSC 260



 Score = 81.3 bits (199), Expect(2) = 5e-41
 Identities = 52/138 (37%), Positives = 81/138 (58%), Gaps = 3/138 (2%)
 Frame = -1

Query: 846 MPALRMKTKPSMIYSQEGSGLGVCQKSSKISKASCTQVRMSQEAEESQSPLQNCQDLSSN 667
           MP+L+MKTK +    ++ +GL VCQKSS ISK SC+++R+SQ+  E +S +Q+CQD+SS+
Sbjct: 1   MPSLKMKTKLNADCLRQKNGLHVCQKSSTISKHSCSRIRISQQTAEFESCIQSCQDVSSS 60

Query: 666 DEVSFSGNECDE-TVDHQDNFNGGIHHCQSHPLSGFDSP--SEIMEIPSDTCSLDYETIF 496
           +EVS      +E  +D Q+  +      Q   LS    P   E  E  +     + ETIF
Sbjct: 61  NEVSTQDTGSNEAAIDQQELLDAENLQFQME-LSSLVDPITMENTEYATVPWPSNLETIF 119

Query: 495 SPISEPIEVLGKEELFNN 442
           SP+ E ++V  +  + N+
Sbjct: 120 SPVLESVDVHSELNILNS 137


>ref|XP_002331872.1| predicted protein [Populus trichocarpa] gi|222875390|gb|EEF12521.1|
           predicted protein [Populus trichocarpa]
          Length = 502

 Score =  114 bits (284), Expect(2) = 3e-39
 Identities = 52/108 (48%), Positives = 73/108 (67%)
 Frame = -2

Query: 326 DDENGRHSPCDYQTCNITDFNISDMTVTGLPFDGTEEFNDIIEAVPFPNFECLGQDTIFD 147
           DD +   S CDYQTCNI+DF ISDM +  LPFDG+   ND  +A PFP+++      +FD
Sbjct: 154 DDSDDNRSSCDYQTCNISDFFISDMIIASLPFDGSTVVNDFTDANPFPDYKYAEPSMLFD 213

Query: 146 MTGRYMILPFLEETVEISSTHDGESCELAMMNSDDTCFYLAIQQMNTC 3
           +    MILPFLE+T ++S + D +SCE A ++SD++  YLAI Q+ +C
Sbjct: 214 VAEECMILPFLEDTAKMSDSDDMKSCEEATIDSDNSSLYLAINQIRSC 261



 Score = 75.9 bits (185), Expect(2) = 3e-39
 Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 4/139 (2%)
 Frame = -1

Query: 846 MPALRMKTKPSMIYSQEGSGLGVCQKSSKISKASCTQVRMSQEAEESQSPLQNCQD--LS 673
           MP+L+MKT  +M   +E   L VCQKS+ +SK SC+QV +S++A ES   +Q CQD  ++
Sbjct: 1   MPSLKMKTNLNMSSLREKKCLSVCQKSNILSKKSCSQVPVSRQAAESDKCVQKCQDGYVA 60

Query: 672 SNDEVSFSGNE--CDETVDHQDNFNGGIHHCQSHPLSGFDSPSEIMEIPSDTCSLDYETI 499
           S+ E+   G +   DE VD QD    G       P +  DS +          + + ETI
Sbjct: 61  SSMEIYTQGEDIKTDEAVDQQDLPRDGNSQFLKQPPTSVDSGTTGDMESIYNFASNLETI 120

Query: 498 FSPISEPIEVLGKEELFNN 442
           FSP+ E IEV     ++++
Sbjct: 121 FSPVLELIEVHSVANIYDD 139


>emb|CBI30814.3| unnamed protein product [Vitis vinifera]
          Length = 479

 Score =  114 bits (285), Expect(2) = 7e-39
 Identities = 57/116 (49%), Positives = 75/116 (64%)
 Frame = -2

Query: 350 LAHSKADNDDENGRHSPCDYQTCNITDFNISDMTVTGLPFDGTEEFNDIIEAVPFPNFEC 171
           LA    D+ D+N R S  DYQTCN++DF ISDM V  LP DG   ++DII   PFP+++C
Sbjct: 141 LAQLIGDDSDDNSRSSS-DYQTCNVSDFYISDMIVADLPIDGNSMYDDIIGINPFPDYKC 199

Query: 170 LGQDTIFDMTGRYMILPFLEETVEISSTHDGESCELAMMNSDDTCFYLAIQQMNTC 3
                +FD+  + MILPFLE+T E  + H   SCE AM+ SD++  YLAI QM +C
Sbjct: 200 GEPSMLFDVAEQCMILPFLEDTREARNIHSPTSCEEAMVGSDNSSLYLAIHQMRSC 255



 Score = 73.9 bits (180), Expect(2) = 7e-39
 Identities = 49/133 (36%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
 Frame = -1

Query: 831 MKTKPSMIYSQEGSGLGVCQKSSKISKASCTQVRMSQEAEESQSPLQNCQDLSSNDEVSF 652
           MKTK +    ++ +GL VCQKSS ISK SC+++R+SQ+  E +S +Q+CQD+SS++EVS 
Sbjct: 1   MKTKLNADCLRQKNGLHVCQKSSTISKHSCSRIRISQQTAEFESCIQSCQDVSSSNEVST 60

Query: 651 SGNECDE-TVDHQDNFNGGIHHCQSHPLSGFDSP--SEIMEIPSDTCSLDYETIFSPISE 481
                +E  +D Q+  +      Q   LS    P   E  E  +     + ETIFSP+ E
Sbjct: 61  QDTGSNEAAIDQQELLDAENLQFQME-LSSLVDPITMENTEYATVPWPSNLETIFSPVLE 119

Query: 480 PIEVLGKEELFNN 442
            ++V  +  + N+
Sbjct: 120 SVDVHSELNILNS 132


>emb|CAN65912.1| hypothetical protein VITISV_035567 [Vitis vinifera]
          Length = 482

 Score =  114 bits (285), Expect(3) = 2e-26
 Identities = 57/116 (49%), Positives = 75/116 (64%)
 Frame = -2

Query: 350 LAHSKADNDDENGRHSPCDYQTCNITDFNISDMTVTGLPFDGTEEFNDIIEAVPFPNFEC 171
           LA    D+ D+N R S  DYQTCN++DF ISDM V  LP DG   ++DII   PFP+++C
Sbjct: 144 LAQLIGDDSDDNSRSSS-DYQTCNVSDFYISDMIVADLPIDGNSMYDDIIGINPFPDYKC 202

Query: 170 LGQDTIFDMTGRYMILPFLEETVEISSTHDGESCELAMMNSDDTCFYLAIQQMNTC 3
                +FD+  + MILPFLE+T E  + H   SCE AM+ SD++  YLAI QM +C
Sbjct: 203 GEPSMLFDVAEQCMILPFLEDTREARNIHSPTSCEEAMVGSDNSSLYLAIHQMRSC 258



 Score = 30.4 bits (67), Expect(3) = 2e-26
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = -2

Query: 791 VVLVSAKSQVRYLRPLALRSGCLRKQKNRKALFKIVRI 678
           +V +  +SQVRY   LAL    L KQ+N   +FK+VR+
Sbjct: 1   MVSMYVRSQVRYPSILALALEFLSKQQNLXHVFKVVRM 38



 Score = 21.9 bits (45), Expect(3) = 2e-26
 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
 Frame = -1

Query: 678 LSSNDEVSFSGNECDET-VDHQDNFNGGIHHCQSHPLSGFDSP--SEIMEIPSDTCSLDY 508
           +SS++EVS      +E  +D Q+  +      Q   LS    P   E  E  +     + 
Sbjct: 55  ISSSNEVSTQDTGRNEAAIDQQELLDAENLQFQME-LSSLVDPITMENTEYATVPWPSNL 113

Query: 507 ETIFSPISEPIEVLGKEELFNN 442
           ETIFSP+ E ++   +  + N+
Sbjct: 114 ETIFSPVLESVDXHSELNILNS 135


>ref|XP_002519748.1| conserved hypothetical protein [Ricinus communis]
           gi|223541165|gb|EEF42721.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 474

 Score =  120 bits (301), Expect = 7e-25
 Identities = 55/108 (50%), Positives = 75/108 (69%)
 Frame = -2

Query: 326 DDENGRHSPCDYQTCNITDFNISDMTVTGLPFDGTEEFNDIIEAVPFPNFECLGQDTIFD 147
           DD +   S CDYQTCNI+DF ISDM V GLPFDG    +DIIE  PFP+++C     +FD
Sbjct: 145 DDSDDNRSSCDYQTCNISDFFISDMIVAGLPFDGNVVNDDIIENNPFPDYKCAESSMLFD 204

Query: 146 MTGRYMILPFLEETVEISSTHDGESCELAMMNSDDTCFYLAIQQMNTC 3
           +    M+LPFLE+T E+++++D +SCE  M+  D+T  YLAI Q+ +C
Sbjct: 205 VAEECMMLPFLEDTAEMNNSNDMKSCEEGMIEPDNTSLYLAINQIRSC 252



 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 44/123 (35%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
 Frame = -1

Query: 831 MKTKPSMIYSQEGSGLGVCQKSSKISKASCTQVRMSQEAEESQSPLQNCQ--DLSSNDEV 658
           MKTK SM   +E   L VCQKSS ISK S   V +S++  E     QNC+   + ++ E+
Sbjct: 1   MKTKLSMGTLREKGCLSVCQKSSMISKKSGPHVTVSRDITEFDGCFQNCEVGYVPTSMEI 60

Query: 657 SFSGNECDETVDHQDNFNGGIHHCQSHPLSGFDSPSEIMEIPSDTCSLDYETIFSPISEP 478
                E DE +D  +    G    Q   L   DS +      + TC+   ETIFSP  EP
Sbjct: 61  YTPDIEGDEAIDQIEFPIEGNSQFQKQSLVFVDSGAMERLESTVTCTSKLETIFSPALEP 120

Query: 477 IEV 469
           + +
Sbjct: 121 VGI 123


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