BLASTX nr result

ID: Coptis25_contig00009715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009715
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527423.1| multidrug resistance-associated protein 1, 3...    86   4e-15
emb|CBI35971.3| unnamed protein product [Vitis vinifera]               72   4e-11
ref|XP_002276193.2| PREDICTED: ABC transporter C family member 8...    72   6e-11
ref|XP_003532999.1| PREDICTED: ABC transporter C family member 8...    72   6e-11
ref|XP_003531625.1| PREDICTED: ABC transporter C family member 8...    72   6e-11

>ref|XP_002527423.1| multidrug resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
           gi|223533233|gb|EEF34989.1| multidrug
           resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
          Length = 1475

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/84 (47%), Positives = 54/84 (64%)
 Frame = +1

Query: 103 GEFYGICPGDFDLGSPCTQRIITDGLGVVFLSLFYLFFIVESVRRHSVCESARKDRVFVA 282
           GE   IC    DLGSPCTQRII D + +VFL +FYLF ++ S+R+H V  S R+D + V 
Sbjct: 16  GELSWICEEKLDLGSPCTQRIIIDIINLVFLGVFYLFLLLGSIRKHQVSGSNRRDWISVV 75

Query: 283 CSVCCVIPSIAHFIAFFWDIRVKD 354
            S+CC + SIA+     WD+  K+
Sbjct: 76  VSICCTLISIAYLGVGLWDLIAKN 99


>emb|CBI35971.3| unnamed protein product [Vitis vinifera]
          Length = 2772

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/88 (37%), Positives = 52/88 (59%)
 Frame = +1

Query: 91  GSIMGEFYGICPGDFDLGSPCTQRIITDGLGVVFLSLFYLFFIVESVRRHSVCESARKDR 270
           G   G F  +C  + DLGS C QR I D L ++FLS+F +  ++  +R+H +   +R+D 
Sbjct: 27  GGYTGGFSWVCGEELDLGSFCIQRTILDVLNLLFLSVFSVILVIGYIRKHEISGCSRRDW 86

Query: 271 VFVACSVCCVIPSIAHFIAFFWDIRVKD 354
           V    S+CC +  IA+  A FWD+ V++
Sbjct: 87  VSGGVSICCALTGIAYVSAGFWDLVVRN 114



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 30/79 (37%), Positives = 49/79 (62%)
 Frame = +1

Query: 118  ICPGDFDLGSPCTQRIITDGLGVVFLSLFYLFFIVESVRRHSVCESARKDRVFVACSVCC 297
            +C  + D+GS C QR I D L ++FLS+F +  ++ S+R+H +   +R+D V    S+CC
Sbjct: 1530 MCGEELDMGSFCIQRSILDVLNLLFLSVFCVLLVIGSIRKHEISRCSRRDWVSRGVSICC 1589

Query: 298  VIPSIAHFIAFFWDIRVKD 354
             + SI +  A FWD+  K+
Sbjct: 1590 ALISIGYLSAGFWDLYAKN 1608


>ref|XP_002276193.2| PREDICTED: ABC transporter C family member 8-like [Vitis vinifera]
          Length = 1462

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/85 (37%), Positives = 52/85 (61%)
 Frame = +1

Query: 100 MGEFYGICPGDFDLGSPCTQRIITDGLGVVFLSLFYLFFIVESVRRHSVCESARKDRVFV 279
           +G F  +C  + DLGS C QR I D L ++FLS+F +  ++  +R+H +   +R+D V  
Sbjct: 8   LGGFSWVCGEELDLGSFCIQRTILDVLNLLFLSVFSVILVIGYIRKHEISGCSRRDWVSG 67

Query: 280 ACSVCCVIPSIAHFIAFFWDIRVKD 354
             S+CC +  IA+  A FWD+ V++
Sbjct: 68  GVSICCALTGIAYVSAGFWDLVVRN 92


>ref|XP_003532999.1| PREDICTED: ABC transporter C family member 8-like [Glycine max]
          Length = 1494

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/72 (48%), Positives = 47/72 (65%)
 Frame = +1

Query: 106 EFYGICPGDFDLGSPCTQRIITDGLGVVFLSLFYLFFIVESVRRHSVCESARKDRVFVAC 285
           +F   C  DFDL S C+Q  I D L ++F+++FY   +V  +RRHS C S RK+ VF+  
Sbjct: 35  DFSWTCLRDFDLTSLCSQTSIIDILKLLFIAVFYTSLLVSLIRRHSECGSNRKNWVFLVV 94

Query: 286 SVCCVIPSIAHF 321
           SVCC + SIAHF
Sbjct: 95  SVCCALISIAHF 106


>ref|XP_003531625.1| PREDICTED: ABC transporter C family member 8-like [Glycine max]
          Length = 1465

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/81 (39%), Positives = 49/81 (60%)
 Frame = +1

Query: 79  LSILGSIMGEFYGICPGDFDLGSPCTQRIITDGLGVVFLSLFYLFFIVESVRRHSVCESA 258
           ++  G+I+ +F GIC  DFD  S C+QR   D + ++F+ +FY   I+  +RR+S C S 
Sbjct: 1   MAYFGNIIDDFSGICLKDFDFTSFCSQRTTIDAINLLFICVFYTSMIISLMRRNSQCGSP 60

Query: 259 RKDRVFVACSVCCVIPSIAHF 321
            K R F+  S+CC I SI  +
Sbjct: 61  SKSRFFILVSICCAIISIVFY 81


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