BLASTX nr result

ID: Coptis25_contig00009709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009709
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304478.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_004143928.1| PREDICTED: UDP-glucose 4-epimerase 1-like [C...    60   2e-07
gb|AAP97493.1| UDP-Glc-4-epimerase [Solanum tuberosum]                 59   4e-07
ref|XP_002268779.2| PREDICTED: UDP-glucose 4-epimerase GEPI48 [V...    59   5e-07
emb|CBI34493.3| unnamed protein product [Vitis vinifera]               59   5e-07

>ref|XP_002304478.1| predicted protein [Populus trichocarpa] gi|222841910|gb|EEE79457.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = -2

Query: 424 AKYGIEEMCRDQWKWASTNPYGYESKP 344
           AKYG+EEMCRDQWKWAS NP+GY+SKP
Sbjct: 322 AKYGVEEMCRDQWKWASNNPWGYQSKP 348


>ref|XP_004143928.1| PREDICTED: UDP-glucose 4-epimerase 1-like [Cucumis sativus]
           gi|449495858|ref|XP_004159965.1| PREDICTED: UDP-glucose
           4-epimerase 1-like [Cucumis sativus]
          Length = 350

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 22/27 (81%), Positives = 26/27 (96%)
 Frame = -2

Query: 424 AKYGIEEMCRDQWKWASTNPYGYESKP 344
           AKYG+EEMCRDQWKWAS+NP+GY+ KP
Sbjct: 324 AKYGVEEMCRDQWKWASSNPWGYQKKP 350


>gb|AAP97493.1| UDP-Glc-4-epimerase [Solanum tuberosum]
          Length = 351

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -2

Query: 424 AKYGIEEMCRDQWKWASTNPYGYESKP 344
           AKYGI EMCRDQWKWAS NP+GY+SKP
Sbjct: 325 AKYGINEMCRDQWKWASQNPWGYQSKP 351


>ref|XP_002268779.2| PREDICTED: UDP-glucose 4-epimerase GEPI48 [Vitis vinifera]
          Length = 574

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 24/29 (82%), Positives = 24/29 (82%)
 Frame = -2

Query: 424 AKYGIEEMCRDQWKWASTNPYGYESKP*T 338
           AKYGI EMCRDQW WAS NPYGYES P T
Sbjct: 545 AKYGISEMCRDQWNWASKNPYGYESSPTT 573


>emb|CBI34493.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 24/29 (82%), Positives = 24/29 (82%)
 Frame = -2

Query: 424 AKYGIEEMCRDQWKWASTNPYGYESKP*T 338
           AKYGI EMCRDQW WAS NPYGYES P T
Sbjct: 319 AKYGISEMCRDQWNWASKNPYGYESSPTT 347


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