BLASTX nr result
ID: Coptis25_contig00009709
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00009709 (425 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002304478.1| predicted protein [Populus trichocarpa] gi|2... 61 1e-07 ref|XP_004143928.1| PREDICTED: UDP-glucose 4-epimerase 1-like [C... 60 2e-07 gb|AAP97493.1| UDP-Glc-4-epimerase [Solanum tuberosum] 59 4e-07 ref|XP_002268779.2| PREDICTED: UDP-glucose 4-epimerase GEPI48 [V... 59 5e-07 emb|CBI34493.3| unnamed protein product [Vitis vinifera] 59 5e-07 >ref|XP_002304478.1| predicted protein [Populus trichocarpa] gi|222841910|gb|EEE79457.1| predicted protein [Populus trichocarpa] Length = 350 Score = 60.8 bits (146), Expect = 1e-07 Identities = 23/27 (85%), Positives = 26/27 (96%) Frame = -2 Query: 424 AKYGIEEMCRDQWKWASTNPYGYESKP 344 AKYG+EEMCRDQWKWAS NP+GY+SKP Sbjct: 322 AKYGVEEMCRDQWKWASNNPWGYQSKP 348 >ref|XP_004143928.1| PREDICTED: UDP-glucose 4-epimerase 1-like [Cucumis sativus] gi|449495858|ref|XP_004159965.1| PREDICTED: UDP-glucose 4-epimerase 1-like [Cucumis sativus] Length = 350 Score = 59.7 bits (143), Expect = 2e-07 Identities = 22/27 (81%), Positives = 26/27 (96%) Frame = -2 Query: 424 AKYGIEEMCRDQWKWASTNPYGYESKP 344 AKYG+EEMCRDQWKWAS+NP+GY+ KP Sbjct: 324 AKYGVEEMCRDQWKWASSNPWGYQKKP 350 >gb|AAP97493.1| UDP-Glc-4-epimerase [Solanum tuberosum] Length = 351 Score = 58.9 bits (141), Expect = 4e-07 Identities = 23/27 (85%), Positives = 25/27 (92%) Frame = -2 Query: 424 AKYGIEEMCRDQWKWASTNPYGYESKP 344 AKYGI EMCRDQWKWAS NP+GY+SKP Sbjct: 325 AKYGINEMCRDQWKWASQNPWGYQSKP 351 >ref|XP_002268779.2| PREDICTED: UDP-glucose 4-epimerase GEPI48 [Vitis vinifera] Length = 574 Score = 58.5 bits (140), Expect = 5e-07 Identities = 24/29 (82%), Positives = 24/29 (82%) Frame = -2 Query: 424 AKYGIEEMCRDQWKWASTNPYGYESKP*T 338 AKYGI EMCRDQW WAS NPYGYES P T Sbjct: 545 AKYGISEMCRDQWNWASKNPYGYESSPTT 573 >emb|CBI34493.3| unnamed protein product [Vitis vinifera] Length = 348 Score = 58.5 bits (140), Expect = 5e-07 Identities = 24/29 (82%), Positives = 24/29 (82%) Frame = -2 Query: 424 AKYGIEEMCRDQWKWASTNPYGYESKP*T 338 AKYGI EMCRDQW WAS NPYGYES P T Sbjct: 319 AKYGISEMCRDQWNWASKNPYGYESSPTT 347