BLASTX nr result

ID: Coptis25_contig00009706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009706
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271403.1| PREDICTED: uncharacterized protein LOC100259...   157   1e-36
emb|CAN60871.1| hypothetical protein VITISV_016379 [Vitis vinifera]   156   3e-36
ref|XP_002309083.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
ref|XP_002323520.1| predicted protein [Populus trichocarpa] gi|2...   139   4e-31
emb|CAN65208.1| hypothetical protein VITISV_043546 [Vitis vinifera]   124   2e-26

>ref|XP_002271403.1| PREDICTED: uncharacterized protein LOC100259726 [Vitis vinifera]
          Length = 303

 Score =  157 bits (398), Expect = 1e-36
 Identities = 99/213 (46%), Positives = 125/213 (58%), Gaps = 16/213 (7%)
 Frame = +2

Query: 2   FCRREFRSAQALGGHMNVHRRDRARLKQSP----------------NSQIESSTLGVQFP 133
           FC+REFRSAQALGGHMNVHRRDRARLKQSP                ++Q   S+LG Q+P
Sbjct: 59  FCKREFRSAQALGGHMNVHRRDRARLKQSPSPHNEILHHHHQNHHNHTQHPCSSLGFQYP 118

Query: 134 PQVCSLVFSPNPNSNSNILAPAISASRVPAPTSTLDKCNDQTLVKSPSYSSTKVHELQMG 313
            QVC+ V++PNPNS+ ++LA   S SRV AP  T + C +Q LV  P YSS+ + E +  
Sbjct: 119 SQVCTFVYNPNPNSDPDVLASPSSLSRVSAP-KTQENCIEQILV--PPYSSSIIQEHKKR 175

Query: 314 SLFSSPATHTDSIAIKVINQSDKYKLEAENNLRGQEIGLGVCREDLKPDSEVSLNMVTSR 493
             FS   ++ +S A   I  SD  K E E + R  E G     + +KPD  VSLN V  R
Sbjct: 176 PPFSPAPSNPNSGADGYICVSDP-KAEGEKSSRILESGCWAKGDYIKPDLSVSLNWVVRR 234

Query: 494 TRPTRSGGDNEDEVISSKRRKIGANSLPFFLKP 592
           TR T S G  E+ +   +RR    + LPFFLKP
Sbjct: 235 TRQTASSGGMEETISCKRRRTDSPSLLPFFLKP 267


>emb|CAN60871.1| hypothetical protein VITISV_016379 [Vitis vinifera]
          Length = 297

 Score =  156 bits (394), Expect = 3e-36
 Identities = 98/213 (46%), Positives = 125/213 (58%), Gaps = 16/213 (7%)
 Frame = +2

Query: 2   FCRREFRSAQALGGHMNVHRRDRARLKQSP----------------NSQIESSTLGVQFP 133
           FC+REFRSAQALGGHMNVHRRDRARLKQSP                ++Q   S+LG Q+P
Sbjct: 59  FCKREFRSAQALGGHMNVHRRDRARLKQSPSPHNEILHHHHQNHHNHTQHPCSSLGFQYP 118

Query: 134 PQVCSLVFSPNPNSNSNILAPAISASRVPAPTSTLDKCNDQTLVKSPSYSSTKVHELQMG 313
            QVC+ V++PNPNS+ ++LA   S SRV AP  T + C +Q LV  P YSS+ + E +  
Sbjct: 119 SQVCTFVYNPNPNSDPDVLASPSSLSRVSAP-KTQENCIEQILV--PPYSSSIIQEHKKR 175

Query: 314 SLFSSPATHTDSIAIKVINQSDKYKLEAENNLRGQEIGLGVCREDLKPDSEVSLNMVTSR 493
             FS   ++ +S A   I  SD  K E + + R  E G     + +KPD  VSLN V  R
Sbjct: 176 PPFSPAPSNPNSGADGYICVSDP-KAEGKKSSRILESGCWAKGDYIKPDLSVSLNWVVRR 234

Query: 494 TRPTRSGGDNEDEVISSKRRKIGANSLPFFLKP 592
           TR T S G  E+ +   +RR    + LPFFLKP
Sbjct: 235 TRQTASSGGMEETISCKRRRTDSPSLLPFFLKP 267


>ref|XP_002309083.1| predicted protein [Populus trichocarpa] gi|222855059|gb|EEE92606.1|
           predicted protein [Populus trichocarpa]
          Length = 301

 Score =  139 bits (351), Expect = 3e-31
 Identities = 94/212 (44%), Positives = 122/212 (57%), Gaps = 16/212 (7%)
 Frame = +2

Query: 2   FCRREFRSAQALGGHMNVHRRDRARLK--------------QSPNSQIES--STLGVQFP 133
           FCRREFRSAQALGGHMNVHRRDRARLK              QSP+S +++   + G Q+P
Sbjct: 59  FCRREFRSAQALGGHMNVHRRDRARLKQPPSPHNEILQQEHQSPHSHLQNPYKSFGFQYP 118

Query: 134 PQVCSLVFSPNPNSNSNILAPAISASRVPAPTSTLDKCNDQTLVKSPSYSSTKVHELQMG 313
            Q+C+LV+SPNPNS+   +A   S+SRV + T T + C  +     P +SS  V E Q  
Sbjct: 119 SQLCNLVYSPNPNSDPGPIASPPSSSRV-STTPTQENCRIKGFF--PPFSSFIVEEQQKR 175

Query: 314 SLFSSPATHTDSIAIKVINQSDKYKLEAENNLRGQEIGLGVCREDLKPDSEVSLNMVTSR 493
           S  SSP   T     +  + SD    E E N R  E G       +K D  VSLN+V  R
Sbjct: 176 SPRSSPPPRTKLATERCYHISD-LSTEGEQNSRKVESGCTGKVNRVKTDLSVSLNLVVRR 234

Query: 494 TRPTRSGGDNEDEVISSKRRKIGANSLPFFLK 589
           TRP+ +  D+E++  S K+R+I  +SLPF LK
Sbjct: 235 TRPSIT--DSEEDPSSCKKRRIDKSSLPFSLK 264


>ref|XP_002323520.1| predicted protein [Populus trichocarpa] gi|222868150|gb|EEF05281.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  139 bits (350), Expect = 4e-31
 Identities = 94/212 (44%), Positives = 119/212 (56%), Gaps = 16/212 (7%)
 Frame = +2

Query: 2   FCRREFRSAQALGGHMNVHRRDRARLKQSPNSQIE----------------SSTLGVQFP 133
           FCRREFRSAQALGGHMNVHRRDRARLKQSP+   E                 ++ G Q+P
Sbjct: 59  FCRREFRSAQALGGHMNVHRRDRARLKQSPSPHNEILHHEHQKPLNHLQNPYTSFGFQYP 118

Query: 134 PQVCSLVFSPNPNSNSNILAPAISASRVPAPTSTLDKCNDQTLVKSPSYSSTKVHELQMG 313
            Q+C+L + PNPNSN   +    S+SRV + TST +   D+T+  SP ++S  V E Q  
Sbjct: 119 SQLCTLDYCPNPNSNPGFIPSRTSSSRV-SITSTQENFCDKTI--SPPFTSFIVEEQQKR 175

Query: 314 SLFSSPATHTDSIAIKVINQSDKYKLEAENNLRGQEIGLGVCREDLKPDSEVSLNMVTSR 493
           S  SSP   T     K          E E N R  E G     + ++ D  VSLN+V  R
Sbjct: 176 SHKSSPPPQTK--LTKERCHISSLSTEGEQNSRKIESGCRAKVDYVQTDLSVSLNLVVRR 233

Query: 494 TRPTRSGGDNEDEVISSKRRKIGANSLPFFLK 589
           TRP+ S  D  +E +S K+R+I  +SLPFFLK
Sbjct: 234 TRPSIS--DCGEEPMSCKKRRIDKSSLPFFLK 263


>emb|CAN65208.1| hypothetical protein VITISV_043546 [Vitis vinifera]
          Length = 272

 Score =  124 bits (310), Expect = 2e-26
 Identities = 76/199 (38%), Positives = 114/199 (57%), Gaps = 3/199 (1%)
 Frame = +2

Query: 2   FCRREFRSAQALGGHMNVHRRDRARLK---QSPNSQIESSTLGVQFPPQVCSLVFSPNPN 172
           FCRREFR+AQALGGHMNVHRRDRARLK    SP+ +I   ++G + P Q+C+LV +PNPN
Sbjct: 54  FCRREFRTAQALGGHMNVHRRDRARLKLQPPSPHKEISGKSMGXEDPDQICTLVCNPNPN 113

Query: 173 SNSNILAPAISASRVPAPTSTLDKCNDQTLVKSPSYSSTKVHELQMGSLFSSPATHTDSI 352
           S   ++A  +S SRV +  S  + C + +++      S+ V E   G+    P + ++S+
Sbjct: 114 SIHGVVASPLSPSRV-SVLSXQENCEELSMI------SSTVQEHHKGTFSCFPQSWSNSV 166

Query: 353 AIKVINQSDKYKLEAENNLRGQEIGLGVCREDLKPDSEVSLNMVTSRTRPTRSGGDNEDE 532
            I+V +  D  + E EN ++ ++  +       K D  +SLN+V          G   ++
Sbjct: 167 PIRVFSIPDSKRRE-ENPMKKRKSRVXDEANSSKSDLSMSLNLVI---------GPGXEQ 216

Query: 533 VISSKRRKIGANSLPFFLK 589
            +S KRR+     LPFFLK
Sbjct: 217 TVSCKRRRTDQIPLPFFLK 235


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