BLASTX nr result
ID: Coptis25_contig00009704
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00009704
(454 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278614.2| PREDICTED: probable LRR receptor-like serine... 80 1e-13
ref|XP_002891200.1| hypothetical protein ARALYDRAFT_473694 [Arab... 78 7e-13
ref|XP_002891202.1| hypothetical protein ARALYDRAFT_891227 [Arab... 77 1e-12
ref|NP_174809.1| putative leucine-rich repeat receptor-like prot... 76 3e-12
ref|XP_002278590.1| PREDICTED: probable LRR receptor-like serine... 76 3e-12
>ref|XP_002278614.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At4g08850-like [Vitis vinifera]
Length = 1078
Score = 80.5 bits (197), Expect = 1e-13
Identities = 64/184 (34%), Positives = 84/184 (45%), Gaps = 33/184 (17%)
Frame = +1
Query: 1 EEAHALLRWKDSIHFEXXXXXXXXXXXXX----------HGHANSPYHCRNWSGIFCNKA 150
EE ALL+WK ++H HG A P C+ W GI CN A
Sbjct: 59 EETQALLKWKSTLHNHNHSFLLSWTLYPDPNNSTNSSTHHGTATGP--CK-WYGISCNHA 115
Query: 151 GKVVDINLSNTSLAGTLQSFPFS------XXXXXXXXXC*PFRTQLHQVSRQ*FLWRNT- 309
G V+ INL+ + L GTLQ+F FS P Q+ +S+ +L +T
Sbjct: 116 GSVIRINLTESGLRGTLQAFSFSSFPNLAYVDVCINNLSGPIPPQIGLLSKLKYLDLSTN 175
Query: 310 ---------IG-------LQIISLGQNHLSGFIPSSLSDLRNLKVLSLFSNQFSGSIPLE 441
IG L +++L N L G IP+SL +L NL L L+ NQ SGSIP E
Sbjct: 176 QFSGGIPPEIGLLTNLEVLHLLALYTNQLEGSIPASLGNLSNLASLYLYENQLSGSIPPE 235
Query: 442 IGNL 453
+GNL
Sbjct: 236 MGNL 239
Score = 55.1 bits (131), Expect = 6e-06
Identities = 30/50 (60%), Positives = 35/50 (70%)
Frame = +1
Query: 304 NTIGLQIISLGQNHLSGFIPSSLSDLRNLKVLSLFSNQFSGSIPLEIGNL 453
N LQ ISL N+LSG IP+SL DL L +L L++NQ SG IP EIGNL
Sbjct: 286 NLTSLQGISLYANNLSGPIPASLGDLSGLTLLHLYANQLSGPIPPEIGNL 335
>ref|XP_002891200.1| hypothetical protein ARALYDRAFT_473694 [Arabidopsis lyrata subsp.
lyrata] gi|297337042|gb|EFH67459.1| hypothetical protein
ARALYDRAFT_473694 [Arabidopsis lyrata subsp. lyrata]
Length = 1123
Score = 78.2 bits (191), Expect = 7e-13
Identities = 49/150 (32%), Positives = 71/150 (47%)
Frame = +1
Query: 4 EAHALLRWKDSIHFEXXXXXXXXXXXXXHGHANSPYHCRNWSGIFCNKAGKVVDINLSNT 183
EA+ALL+WK + F + N + C +W G+FCN G + +NL++
Sbjct: 33 EANALLKWKST--FTNQSHSSKLSSWVNDANTNPSFSCTSWYGVFCNSRGSIEKLNLTDN 90
Query: 184 SLAGTLQSFPFSXXXXXXXXXC*PFRTQLHQVSRQ*FLWRNTIGLQIISLGQNHLSGFIP 363
++ GT Q FPFS R + Q + N L L NHL+ IP
Sbjct: 91 AIEGTFQDFPFSSLPNLASIDLSMNRFS-GTIPPQ---FGNLSKLIYFDLSTNHLTREIP 146
Query: 364 SSLSDLRNLKVLSLFSNQFSGSIPLEIGNL 453
SL +L+NL VL L N +G IP ++GN+
Sbjct: 147 PSLGNLKNLTVLDLHHNYLTGVIPPDLGNM 176
>ref|XP_002891202.1| hypothetical protein ARALYDRAFT_891227 [Arabidopsis lyrata subsp.
lyrata] gi|297337044|gb|EFH67461.1| hypothetical protein
ARALYDRAFT_891227 [Arabidopsis lyrata subsp. lyrata]
Length = 1007
Score = 77.4 bits (189), Expect = 1e-12
Identities = 50/150 (33%), Positives = 71/150 (47%)
Frame = +1
Query: 4 EAHALLRWKDSIHFEXXXXXXXXXXXXXHGHANSPYHCRNWSGIFCNKAGKVVDINLSNT 183
EA+ALL+WK + F + N+ + C +W G+ CN G + +NL+
Sbjct: 33 EANALLKWKST--FTNQKRSSKLSSWVNDANTNTSFSCTSWYGVSCNSRGSIKKLNLTGN 90
Query: 184 SLAGTLQSFPFSXXXXXXXXXC*PFRTQLHQVSRQ*FLWRNTIGLQIISLGQNHLSGFIP 363
++ GT Q FPFS R + Q + N L L NHL+ IP
Sbjct: 91 AIEGTFQDFPFSSLPNLAYIDFSMNRFS-GTIPPQ---FGNLFKLIYFDLSTNHLTREIP 146
Query: 364 SSLSDLRNLKVLSLFSNQFSGSIPLEIGNL 453
L +L+NLK LSL +N+ +GSIP IG L
Sbjct: 147 PELGNLQNLKGLSLSNNKLAGSIPSSIGKL 176
>ref|NP_174809.1| putative leucine-rich repeat receptor-like protein [Arabidopsis
thaliana] gi|75175345|sp|Q9LP24.1|Y1571_ARATH RecName:
Full=Probable leucine-rich repeat receptor-like protein
kinase At1g35710; Flags: Precursor
gi|8778966|gb|AAF79881.1|AC021198_1 Contains similarity
to receptor protein kinase-like protein from Arabidopsis
thaliana gb|AL161513. It contains a eukaryotic protein
kinase domain PF|00069. EST gb|AI997574 comes from this
gene [Arabidopsis thaliana] gi|332193703|gb|AEE31824.1|
putative leucine-rich repeat receptor-like protein
[Arabidopsis thaliana]
Length = 1120
Score = 75.9 bits (185), Expect = 3e-12
Identities = 50/158 (31%), Positives = 70/158 (44%), Gaps = 8/158 (5%)
Frame = +1
Query: 4 EAHALLRWKDSIHFEXXXXXXXXXXXXXHGHANSPYHCRNWSGIFCNKAGKVVDINLSNT 183
EA+ALL+WK + + N+ + C +W G+ CN G + ++NL+NT
Sbjct: 33 EANALLKWKSTF-----TNSSKLSSWVHDANTNTSFSCTSWYGVSCNSRGSIEELNLTNT 87
Query: 184 SLAGTLQSFPFSXXXXXXXXXC*PFRTQLHQVSRQ*FLWRNTIGLQI--------ISLGQ 339
+ GT Q FPF + L V L TI Q L
Sbjct: 88 GIEGTFQDFPFISL------------SNLAYVDLSMNLLSGTIPPQFGNLSKLIYFDLST 135
Query: 340 NHLSGFIPSSLSDLRNLKVLSLFSNQFSGSIPLEIGNL 453
NHL+G I SL +L+NL VL L N + IP E+GN+
Sbjct: 136 NHLTGEISPSLGNLKNLTVLYLHQNYLTSVIPSELGNM 173
>ref|XP_002278590.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At4g08850-like [Vitis vinifera]
Length = 1037
Score = 75.9 bits (185), Expect = 3e-12
Identities = 57/164 (34%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Frame = +1
Query: 1 EEAHALLRWKDSIHFEXXXXXXXXXXXXXHGHANSPYH-------CRNWSGIFCNKAGKV 159
EE ALL+WK ++H + NS H C+ W GI CN AG V
Sbjct: 33 EETQALLKWKATLH-NHNHSSLLSWTLYPNNFTNSSTHLGTEVSPCK-WYGISCNHAGSV 90
Query: 160 VDINLSNTSLAGTLQSFPFS------XXXXXXXXXC*PFRTQLHQVSRQ*FLWRNTIGLQ 321
+ INL+ + L GTLQ+F FS P Q+ +S+ L+
Sbjct: 91 IRINLTESGLGGTLQAFSFSSFPNLAYVDISMNNLSGPIPPQIGLLSK----------LK 140
Query: 322 IISLGQNHLSGFIPSSLSDLRNLKVLSLFSNQFSGSIPLEIGNL 453
+ L N SG IP + L NL+VL L NQ +GSIP EIG L
Sbjct: 141 YLDLSINQFSGGIPPEIGLLTNLEVLHLVQNQLNGSIPHEIGQL 184