BLASTX nr result
ID: Coptis25_contig00009696
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00009696
(767 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004142921.1| PREDICTED: uncharacterized protein LOC101216... 129 4e-36
ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259... 124 1e-35
emb|CBI20623.3| unnamed protein product [Vitis vinifera] 124 1e-35
ref|XP_002516463.1| nucleic acid binding protein, putative [Rici... 121 9e-34
ref|XP_002308575.1| predicted protein [Populus trichocarpa] gi|2... 120 2e-31
>ref|XP_004142921.1| PREDICTED: uncharacterized protein LOC101216803 [Cucumis sativus]
gi|449494409|ref|XP_004159539.1| PREDICTED:
uncharacterized LOC101216803 [Cucumis sativus]
Length = 694
Score = 129 bits (324), Expect(2) = 4e-36
Identities = 69/88 (78%), Positives = 76/88 (86%)
Frame = -1
Query: 269 HQASSALPVPYGFQGGTANGSSKKIEIPNGRVGVIIGKGGETIKYLQSQSGGAKIQVTRD 90
+ A SA+P+ YGFQG SSKKIEIPNGRVGVIIGKGGETIKYLQ QSG AKIQVTRD
Sbjct: 120 NSAPSAIPISYGFQG-----SSKKIEIPNGRVGVIIGKGGETIKYLQLQSG-AKIQVTRD 173
Query: 89 MDADPHSLTRLVEIMGTSDQISKAEQLI 6
MDADP+S TR+VE+MGT DQI+KAEQLI
Sbjct: 174 MDADPNSTTRMVELMGTPDQIAKAEQLI 201
Score = 48.5 bits (114), Expect(2) = 4e-36
Identities = 28/61 (45%), Positives = 34/61 (55%), Gaps = 12/61 (19%)
Frame = -3
Query: 492 PPAMDQFQLAKQRAQEIASRLYNNT------------TEPKRPRTESNGSDDSNPNDYGS 349
PP MD+ QLAKQRAQEIASRL ++ + KRPR E+ G DS + S
Sbjct: 51 PPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADVKRPRVENGGGYDSYDKGFSS 110
Query: 348 G 346
G
Sbjct: 111 G 111
>ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259454 [Vitis vinifera]
Length = 690
Score = 124 bits (312), Expect(2) = 1e-35
Identities = 67/84 (79%), Positives = 74/84 (88%)
Frame = -1
Query: 257 SALPVPYGFQGGTANGSSKKIEIPNGRVGVIIGKGGETIKYLQSQSGGAKIQVTRDMDAD 78
SA+PV YG+QG +SKKI+IPNGRVGVIIGKGGETIKYLQ QSG AKIQVTRDMDAD
Sbjct: 125 SAIPVSYGYQG-----TSKKIDIPNGRVGVIIGKGGETIKYLQLQSG-AKIQVTRDMDAD 178
Query: 77 PHSLTRLVEIMGTSDQISKAEQLI 6
P+S TRLVE+MGT DQI+KAEQLI
Sbjct: 179 PNSPTRLVELMGTPDQIAKAEQLI 202
Score = 52.0 bits (123), Expect(2) = 1e-35
Identities = 31/55 (56%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Frame = -3
Query: 498 VPPPAMDQFQLAKQRAQEIASRLYNN--TTEPKRPRTESN---GSDDSNPNDYGS 349
VPPPA D+ QLAKQRAQEIA+RL++N TE KRPR E+ G DS + S
Sbjct: 57 VPPPA-DEIQLAKQRAQEIAARLFSNASNTEAKRPRVENGAGAGGFDSGDKGFSS 110
Score = 60.5 bits (145), Expect = 4e-07
Identities = 34/74 (45%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = -1
Query: 224 GTANGSSKKIEIPNGRVGVIIGKGGETIKYLQSQSGGAKIQV-TRDMDADPHSLTRLVEI 48
G A +++PN +VG+IIGKGGETIK +Q+++ GA+IQV + S+ R V+I
Sbjct: 223 GQAGSEQFVMKVPNNKVGLIIGKGGETIKNMQART-GARIQVIPLHLPPGDTSMERTVQI 281
Query: 47 MGTSDQISKAEQLI 6
GTS+QI A+QL+
Sbjct: 282 DGTSEQIESAKQLV 295
>emb|CBI20623.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 124 bits (312), Expect(2) = 1e-35
Identities = 67/84 (79%), Positives = 74/84 (88%)
Frame = -1
Query: 257 SALPVPYGFQGGTANGSSKKIEIPNGRVGVIIGKGGETIKYLQSQSGGAKIQVTRDMDAD 78
SA+PV YG+QG +SKKI+IPNGRVGVIIGKGGETIKYLQ QSG AKIQVTRDMDAD
Sbjct: 125 SAIPVSYGYQG-----TSKKIDIPNGRVGVIIGKGGETIKYLQLQSG-AKIQVTRDMDAD 178
Query: 77 PHSLTRLVEIMGTSDQISKAEQLI 6
P+S TRLVE+MGT DQI+KAEQLI
Sbjct: 179 PNSPTRLVELMGTPDQIAKAEQLI 202
Score = 52.0 bits (123), Expect(2) = 1e-35
Identities = 31/55 (56%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Frame = -3
Query: 498 VPPPAMDQFQLAKQRAQEIASRLYNN--TTEPKRPRTESN---GSDDSNPNDYGS 349
VPPPA D+ QLAKQRAQEIA+RL++N TE KRPR E+ G DS + S
Sbjct: 57 VPPPA-DEIQLAKQRAQEIAARLFSNASNTEAKRPRVENGAGAGGFDSGDKGFSS 110
Score = 60.5 bits (145), Expect = 4e-07
Identities = 34/74 (45%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = -1
Query: 224 GTANGSSKKIEIPNGRVGVIIGKGGETIKYLQSQSGGAKIQV-TRDMDADPHSLTRLVEI 48
G A +++PN +VG+IIGKGGETIK +Q+++ GA+IQV + S+ R V+I
Sbjct: 223 GQAGSEQFVMKVPNNKVGLIIGKGGETIKNMQART-GARIQVIPLHLPPGDTSMERTVQI 281
Query: 47 MGTSDQISKAEQLI 6
GTS+QI A+QL+
Sbjct: 282 DGTSEQIESAKQLV 295
>ref|XP_002516463.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544283|gb|EEF45804.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 306
Score = 121 bits (303), Expect(2) = 9e-34
Identities = 67/88 (76%), Positives = 74/88 (84%)
Frame = -1
Query: 269 HQASSALPVPYGFQGGTANGSSKKIEIPNGRVGVIIGKGGETIKYLQSQSGGAKIQVTRD 90
+ A SA+PV YG G+ SSKKIEIPNGRVGVIIGKGGETIKYLQ QSG AKIQVTRD
Sbjct: 123 NSAPSAIPVSYGTYLGS---SSKKIEIPNGRVGVIIGKGGETIKYLQIQSG-AKIQVTRD 178
Query: 89 MDADPHSLTRLVEIMGTSDQISKAEQLI 6
MDADP+S TR+VE+MG DQI+KAEQLI
Sbjct: 179 MDADPNSPTRMVELMGNPDQIAKAEQLI 206
Score = 48.9 bits (115), Expect(2) = 9e-34
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 4/54 (7%)
Frame = -3
Query: 492 PPAMDQFQLAKQRAQEIASRLYNNTT----EPKRPRTESNGSDDSNPNDYGSGY 343
PP +D+ Q+AKQ+AQEIA+RL + + KRPR ++NG+ + ND G+
Sbjct: 57 PPPVDEIQMAKQKAQEIAARLLSGAAGGGGDIKRPRVDNNGASGFDSNDNNKGF 110
>ref|XP_002308575.1| predicted protein [Populus trichocarpa] gi|222854551|gb|EEE92098.1|
predicted protein [Populus trichocarpa]
Length = 242
Score = 120 bits (301), Expect(2) = 2e-31
Identities = 66/89 (74%), Positives = 77/89 (86%), Gaps = 1/89 (1%)
Frame = -1
Query: 269 HQASSALPVPYG-FQGGTANGSSKKIEIPNGRVGVIIGKGGETIKYLQSQSGGAKIQVTR 93
+ A S++PV YG + GG+ GSSKKI+IP GRVGVIIGKGGETIKYLQ QSG AKIQVTR
Sbjct: 118 NSAPSSIPVSYGSYLGGS--GSSKKIDIPQGRVGVIIGKGGETIKYLQLQSG-AKIQVTR 174
Query: 92 DMDADPHSLTRLVEIMGTSDQISKAEQLI 6
DMDADP+S TR+VE+MGT +QI+KAEQLI
Sbjct: 175 DMDADPNSPTRMVELMGTPEQIAKAEQLI 203
Score = 42.0 bits (97), Expect(2) = 2e-31
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Frame = -3
Query: 498 VPPPAMDQFQLAKQRAQEIASRLYNNT-TEPKRPRTESNGSD-DSNPNDYG 352
V PPA D+ Q+AKQ+AQEIA+R+ + + KRPR E+ S DS+ N+ G
Sbjct: 55 VAPPA-DEIQMAKQKAQEIAARIMSGAGADIKRPRAENGASGFDSSENNKG 104