BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009681
         (1668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADV03080.1| farnesyl diphosphate synthase [Bacopa monnieri]        584   e-164
gb|AAV58896.1| farnesyl diphosphate synthase [Centella asiatica]      582   e-163
gb|AAK63847.1|AF384040_1 farnesyl diphosphate synthase [Mentha x...   582   e-163
gb|AAY87903.1| farnesyl diphosphate synthase [Panax ginseng]          579   e-163
ref|XP_002272641.1| PREDICTED: farnesyl pyrophosphate synthase 1...   579   e-163

>gb|ADV03080.1| farnesyl diphosphate synthase [Bacopa monnieri]
          Length = 349

 Score =  584 bits (1506), Expect = e-164
 Identities = 290/375 (77%), Positives = 316/375 (84%)
 Frame = -3

Query: 1477 AASNGPVSDLRKTFLEVYSVLKSELLEDHSFEFTDDSRQWVERMLDYNVPGGKLNRGLSV 1298
            A  NG  +DLR+ FL VYSVLKSELL D +FE+TD SR+WVERMLDYNVPGGKLNRGLSV
Sbjct: 2    ANHNGQTTDLREAFLGVYSVLKSELLNDPAFEWTDASREWVERMLDYNVPGGKLNRGLSV 61

Query: 1297 IDSYKLLNEGKSLTENEVFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVEKV 1118
            IDSYKLL EGK LTE EVFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRV KV
Sbjct: 62   IDSYKLLKEGKDLTEEEVFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKV 121

Query: 1117 GMIAVNDGIILRNHIPRILKNHFREKTYYIELMELFNEVEFQTASGQMIDLITTLQGEKD 938
            GMIAVNDGIILRNHIPRILK HFR K YY++L++LFNEVEFQTASGQMIDLITT++GEKD
Sbjct: 122  GMIAVNDGIILRNHIPRILKKHFRNKPYYVDLVDLFNEVEFQTASGQMIDLITTIEGEKD 181

Query: 937  LSKYTLPVHRRIVQYKTAYYSFYLPVACALLMAGENLDNHTLVKDVLIEMGTYFQVQDDY 758
            LSKY+LP+HRRIVQYKTAYYSFYLPVACALLMAGENLDNH  VKDVLI+MG YFQVQDDY
Sbjct: 182  LSKYSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLDNHVNVKDVLIDMGIYFQVQDDY 241

Query: 757  LDCFGDPEVIGKIGTDIXXXXXXXXXXXXXXXXXXXXGKIGTDIEDFKCSWLVVQALERA 578
            LDCFG+PE IGK                           IGTDIEDFKCSWLVVQALE  
Sbjct: 242  LDCFGEPEKIGK---------------------------IGTDIEDFKCSWLVVQALEHC 274

Query: 577  NIDQNKLLYENYGKADPTCVAKVKELYKDLNLQGVFAEYEAKSYEKLISSIEAHPSKAVQ 398
            N +Q K+L+E+YGK DP  VAK+K LY ++NLQ +F +YE+KSYEKL SSIE+HPSKAVQ
Sbjct: 275  NEEQKKILFEHYGKPDPADVAKIKALYNEINLQSIFTDYESKSYEKLNSSIESHPSKAVQ 334

Query: 397  AVLKSFLGKIYKRQK 353
            AVLKSFLGKIYKRQK
Sbjct: 335  AVLKSFLGKIYKRQK 349


>gb|AAV58896.1| farnesyl diphosphate synthase [Centella asiatica]
          Length = 342

 Score =  582 bits (1499), Expect = e-163
 Identities = 285/369 (77%), Positives = 316/369 (85%)
 Frame = -3

Query: 1459 VSDLRKTFLEVYSVLKSELLEDHSFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 1280
            +SDL+  FLEVYSVLKS+LL D +FEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL
Sbjct: 1    MSDLKTRFLEVYSVLKSDLLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60

Query: 1279 LNEGKSLTENEVFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVEKVGMIAVN 1100
            L EGK L+++E+ L+SALGWCIEWLQAYFLVLDDIMD SHTRRGQPCWFR+ KVGMIA+N
Sbjct: 61   LKEGKELSDDEIVLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRIPKVGMIAIN 120

Query: 1099 DGIILRNHIPRILKNHFREKTYYIELMELFNEVEFQTASGQMIDLITTLQGEKDLSKYTL 920
            DGI+LRNHIPRILK HFR+K YY++L++LFNEVEFQTA GQMIDLITTL GEKDLSKY+L
Sbjct: 121  DGILLRNHIPRILKKHFRQKPYYVDLLDLFNEVEFQTACGQMIDLITTLVGEKDLSKYSL 180

Query: 919  PVHRRIVQYKTAYYSFYLPVACALLMAGENLDNHTLVKDVLIEMGTYFQVQDDYLDCFGD 740
            P+HRRIVQYKTAYYSFYLPVACALLMAGE+L+ HT VKD+LIEMGTYFQVQDDYLDCFG 
Sbjct: 181  PIHRRIVQYKTAYYSFYLPVACALLMAGEDLEKHTNVKDILIEMGTYFQVQDDYLDCFGA 240

Query: 739  PEVIGKIGTDIXXXXXXXXXXXXXXXXXXXXGKIGTDIEDFKCSWLVVQALERANIDQNK 560
            PEVIGK                           IGTDIEDFKCSWLVV+ALE +N +Q K
Sbjct: 241  PEVIGK---------------------------IGTDIEDFKCSWLVVKALELSNEEQKK 273

Query: 559  LLYENYGKADPTCVAKVKELYKDLNLQGVFAEYEAKSYEKLISSIEAHPSKAVQAVLKSF 380
             L+ENYGK DP CVAK+KELYKDL LQ VFAEYE+KSYEKLI  IEAHP+++VQAVLKSF
Sbjct: 274  CLHENYGKEDPACVAKIKELYKDLKLQDVFAEYESKSYEKLIKFIEAHPNQSVQAVLKSF 333

Query: 379  LGKIYKRQK 353
            LGKIYKRQK
Sbjct: 334  LGKIYKRQK 342


>gb|AAK63847.1|AF384040_1 farnesyl diphosphate synthase [Mentha x piperita]
          Length = 349

 Score =  582 bits (1499), Expect = e-163
 Identities = 286/372 (76%), Positives = 317/372 (85%)
 Frame = -3

Query: 1468 NGPVSDLRKTFLEVYSVLKSELLEDHSFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDS 1289
            NG  SDLRKTFL VYS LKSELL D +FE+TD SRQWVERMLDYNVPGGKLNRGLSVIDS
Sbjct: 5    NGAASDLRKTFLGVYSTLKSELLNDPAFEWTDGSRQWVERMLDYNVPGGKLNRGLSVIDS 64

Query: 1288 YKLLNEGKSLTENEVFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVEKVGMI 1109
            Y+LL EGK LT++EVFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWF+V KVGMI
Sbjct: 65   YQLLKEGKDLTDDEVFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFKVPKVGMI 124

Query: 1108 AVNDGIILRNHIPRILKNHFREKTYYIELMELFNEVEFQTASGQMIDLITTLQGEKDLSK 929
            A+NDGIILRNHIPRILK HFR K YY++L++LFNEVEFQTASGQMIDLITT++GEKDLSK
Sbjct: 125  AINDGIILRNHIPRILKKHFRSKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSK 184

Query: 928  YTLPVHRRIVQYKTAYYSFYLPVACALLMAGENLDNHTLVKDVLIEMGTYFQVQDDYLDC 749
            Y+LP+HRRIVQYKTAYYSFYLPVACALLMAGENL+NH  VKDVLI+MG YFQVQDDYLDC
Sbjct: 185  YSLPLHRRIVQYKTAYYSFYLPVACALLMAGENLENHPTVKDVLIDMGIYFQVQDDYLDC 244

Query: 748  FGDPEVIGKIGTDIXXXXXXXXXXXXXXXXXXXXGKIGTDIEDFKCSWLVVQALERANID 569
            FG+PE IGK                           IGTDIEDFKCSWLVV+ALE  N +
Sbjct: 245  FGEPEKIGK---------------------------IGTDIEDFKCSWLVVKALELCNEE 277

Query: 568  QNKLLYENYGKADPTCVAKVKELYKDLNLQGVFAEYEAKSYEKLISSIEAHPSKAVQAVL 389
            Q K L+E+YGK +P  VAK+K LY D+NLQG+FA++E+KSYEK+ SSIEAHPSK+VQAVL
Sbjct: 278  QKKTLFEHYGKENPADVAKIKALYNDINLQGMFADFESKSYEKITSSIEAHPSKSVQAVL 337

Query: 388  KSFLGKIYKRQK 353
            KSFLGKIYKRQK
Sbjct: 338  KSFLGKIYKRQK 349


>gb|AAY87903.1| farnesyl diphosphate synthase [Panax ginseng]
          Length = 342

 Score =  579 bits (1493), Expect = e-163
 Identities = 287/369 (77%), Positives = 316/369 (85%)
 Frame = -3

Query: 1459 VSDLRKTFLEVYSVLKSELLEDHSFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 1280
            +SDL+  FLEVYSVLKSELL D +FEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL
Sbjct: 1    MSDLKTRFLEVYSVLKSELLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 60

Query: 1279 LNEGKSLTENEVFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVEKVGMIAVN 1100
            L EGK L+++E+FL+SALGWCIEWLQAYFLVLDDIMD+SHTRRGQPCWFR+ KVGMIAVN
Sbjct: 61   LKEGKELSDDEIFLSSALGWCIEWLQAYFLVLDDIMDSSHTRRGQPCWFRLPKVGMIAVN 120

Query: 1099 DGIILRNHIPRILKNHFREKTYYIELMELFNEVEFQTASGQMIDLITTLQGEKDLSKYTL 920
            DGI+LRNHIPRILK HFR+K YY++L++LFNEVEFQTASGQMIDLITTL GEKDLSKY+L
Sbjct: 121  DGILLRNHIPRILKKHFRQKPYYVDLLDLFNEVEFQTASGQMIDLITTLVGEKDLSKYSL 180

Query: 919  PVHRRIVQYKTAYYSFYLPVACALLMAGENLDNHTLVKDVLIEMGTYFQVQDDYLDCFGD 740
            P+HRRIVQYKTAYYSFYLPVACALLM+GE+L+ HT VKD+LIEMGTYFQVQDDYLDCFG 
Sbjct: 181  PIHRRIVQYKTAYYSFYLPVACALLMSGEDLEKHTNVKDILIEMGTYFQVQDDYLDCFGA 240

Query: 739  PEVIGKIGTDIXXXXXXXXXXXXXXXXXXXXGKIGTDIEDFKCSWLVVQALERANIDQNK 560
            PEVIGK                           IGTDIEDFKCSWLVV+ALE +N +Q K
Sbjct: 241  PEVIGK---------------------------IGTDIEDFKCSWLVVKALELSNEEQKK 273

Query: 559  LLYENYGKADPTCVAKVKELYKDLNLQGVFAEYEAKSYEKLISSIEAHPSKAVQAVLKSF 380
             L+ENYGK DP  VAKVKELY  L LQ VFAEYE+KSY+KLI  IEAHPS+AVQAVLKSF
Sbjct: 274  FLHENYGKDDPASVAKVKELYNTLKLQDVFAEYESKSYDKLIKFIEAHPSQAVQAVLKSF 333

Query: 379  LGKIYKRQK 353
            LGKIYKRQK
Sbjct: 334  LGKIYKRQK 342


>ref|XP_002272641.1| PREDICTED: farnesyl pyrophosphate synthase 1 [Vitis vinifera]
            gi|296089967|emb|CBI39786.3| unnamed protein product
            [Vitis vinifera]
          Length = 341

 Score =  579 bits (1493), Expect = e-163
 Identities = 287/369 (77%), Positives = 315/369 (85%)
 Frame = -3

Query: 1459 VSDLRKTFLEVYSVLKSELLEDHSFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL 1280
            +S+ +  FLEVYSVLKSELL D +FEFTDDSRQWVERMLDYNVPGGKLNRGLSV+DSYKL
Sbjct: 1    MSETKSKFLEVYSVLKSELLNDPAFEFTDDSRQWVERMLDYNVPGGKLNRGLSVVDSYKL 60

Query: 1279 LNEGKSLTENEVFLASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVEKVGMIAVN 1100
            L +G+ LT++EVFLA  LGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRV KVGMIA N
Sbjct: 61   L-QGRQLTDDEVFLACVLGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAAN 119

Query: 1099 DGIILRNHIPRILKNHFREKTYYIELMELFNEVEFQTASGQMIDLITTLQGEKDLSKYTL 920
            DG+ILRN IPRILKNHF+ K YY++L++LFNEVEFQTASGQMIDLITT++GEKDLSKY+L
Sbjct: 120  DGVILRNQIPRILKNHFKGKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYSL 179

Query: 919  PVHRRIVQYKTAYYSFYLPVACALLMAGENLDNHTLVKDVLIEMGTYFQVQDDYLDCFGD 740
            P+HRRIVQYKTAYYSFYLPVACALLMAGENLDNHT VKD+L++MG YFQVQDDYLDCFGD
Sbjct: 180  PLHRRIVQYKTAYYSFYLPVACALLMAGENLDNHTSVKDILVQMGIYFQVQDDYLDCFGD 239

Query: 739  PEVIGKIGTDIXXXXXXXXXXXXXXXXXXXXGKIGTDIEDFKCSWLVVQALERANIDQNK 560
            P+VIGK                           IGTDIEDFKCSWLVV+ALE  N +Q K
Sbjct: 240  PQVIGK---------------------------IGTDIEDFKCSWLVVKALEICNEEQKK 272

Query: 559  LLYENYGKADPTCVAKVKELYKDLNLQGVFAEYEAKSYEKLISSIEAHPSKAVQAVLKSF 380
             LY NYGKADP  VAKVK LYKDL+LQGVF EYE+KSYE L+SSIEAHPSKAVQAVLKSF
Sbjct: 273  TLYGNYGKADPANVAKVKALYKDLDLQGVFLEYESKSYETLVSSIEAHPSKAVQAVLKSF 332

Query: 379  LGKIYKRQK 353
            LGKIYKRQK
Sbjct: 333  LGKIYKRQK 341