BLASTX nr result

ID: Coptis25_contig00009666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009666
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262981.1| PREDICTED: short-chain dehydrogenase TIC 32,...    58   7e-07
ref|XP_002299444.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002262981.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis
           vinifera] gi|297742402|emb|CBI34551.3| unnamed protein
           product [Vitis vinifera]
          Length = 336

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = +3

Query: 3   GKYFADCNEASSSQLGSNLKEASRLWIASEAMTAK 107
           GKYFADCNEA +S+LGSN +EASRLW ASE MTA+
Sbjct: 289 GKYFADCNEAWTSKLGSNSQEASRLWSASEIMTAR 323


>ref|XP_002299444.1| predicted protein [Populus trichocarpa] gi|222846702|gb|EEE84249.1|
           predicted protein [Populus trichocarpa]
          Length = 332

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = +3

Query: 3   GKYFADCNEASSSQLGSNLKEASRLWIASEAMTAK 107
           GKYF+DCNEAS+S+LGSN  EA+RLW ASE M ++
Sbjct: 290 GKYFSDCNEASTSKLGSNSTEAARLWTASEIMVSR 324


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