BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009655
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADU56179.1| transcription initiation factor TFIID subunit [Ja...   208   3e-52
ref|XP_002275358.1| PREDICTED: transcription initiation factor T...   207   6e-52
ref|XP_002320312.1| predicted protein [Populus trichocarpa] gi|2...   204   5e-51
ref|XP_002515305.1| Transcription initiation factor TFIID subuni...   204   6e-51
gb|AFL48184.1| TBP-associated factor 13 protein [Capsicum annuum]     202   2e-50

>gb|ADU56179.1| transcription initiation factor TFIID subunit [Jatropha curcas]
          Length = 128

 Score =  208 bits (530), Expect = 3e-52
 Identities = 107/127 (84%), Positives = 114/127 (89%)
 Frame = +2

Query: 83  NSTTGGNSASKSKAGTSQPSDTTSFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALLEDI 262
           N+ + G S SKSK GTSQPS+T SFKRKRGVFQKDLQHMMYGFGDDPNPLPETVAL+EDI
Sbjct: 2   NNLSAGPS-SKSKVGTSQPSET-SFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDI 59

Query: 263 AVEYVTDLVNKAQDVASKRGKLLTEDFLYLIRKDRPKFNRCTELLSMNEELKQARKAFEV 442
            VEYVTDL +KAQD+ SKRGKLL EDFLYLIRKD PK NRCTELLSM EELKQARKAFEV
Sbjct: 60  VVEYVTDLAHKAQDIGSKRGKLLVEDFLYLIRKDLPKLNRCTELLSMQEELKQARKAFEV 119

Query: 443 DEEKLAT 463
           DEEKLA+
Sbjct: 120 DEEKLAS 126


>ref|XP_002275358.1| PREDICTED: transcription initiation factor TFIID subunit 13-like
           isoform 3 [Vitis vinifera]
           gi|225437519|ref|XP_002275335.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 2 [Vitis vinifera]
           gi|225437521|ref|XP_002275286.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 1 [Vitis vinifera]
           gi|359480146|ref|XP_003632408.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           [Vitis vinifera]
          Length = 128

 Score =  207 bits (528), Expect = 6e-52
 Identities = 107/127 (84%), Positives = 117/127 (92%)
 Frame = +2

Query: 83  NSTTGGNSASKSKAGTSQPSDTTSFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALLEDI 262
           NS++ G S SK +AG+SQPSD+ SFKRKRGVFQKDLQHMMYGFGDD NPLPETVALLEDI
Sbjct: 2   NSSSAGPS-SKPRAGSSQPSDS-SFKRKRGVFQKDLQHMMYGFGDDANPLPETVALLEDI 59

Query: 263 AVEYVTDLVNKAQDVASKRGKLLTEDFLYLIRKDRPKFNRCTELLSMNEELKQARKAFEV 442
            VEYVTDLV+KAQ+ ASKRGKLLTEDFL+L+RKD PK NRCTELLSMNEELKQARKAF+V
Sbjct: 60  VVEYVTDLVHKAQETASKRGKLLTEDFLFLMRKDLPKLNRCTELLSMNEELKQARKAFDV 119

Query: 443 DEEKLAT 463
           DEEKLAT
Sbjct: 120 DEEKLAT 126


>ref|XP_002320312.1| predicted protein [Populus trichocarpa] gi|222861085|gb|EEE98627.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score =  204 bits (520), Expect = 5e-51
 Identities = 102/131 (77%), Positives = 114/131 (87%)
 Frame = +2

Query: 77  MQNSTTGGNSASKSKAGTSQPSDTTSFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALLE 256
           M NS+TG  S+SKSKAG+S     TSFKRKRG+FQKDLQHMMYGFGDDPNPLPETVAL+E
Sbjct: 1   MNNSSTG--SSSKSKAGSSSQPSETSFKRKRGMFQKDLQHMMYGFGDDPNPLPETVALVE 58

Query: 257 DIAVEYVTDLVNKAQDVASKRGKLLTEDFLYLIRKDRPKFNRCTELLSMNEELKQARKAF 436
           DI VEYVTD+ +KAQ++ SKRGKL  EDFL+LIRKD PK NRCTELLSM EELKQARKAF
Sbjct: 59  DIVVEYVTDMAHKAQEIGSKRGKLSVEDFLFLIRKDPPKLNRCTELLSMQEELKQARKAF 118

Query: 437 EVDEEKLATND 469
           EVDEEKLA+ +
Sbjct: 119 EVDEEKLASTE 129


>ref|XP_002515305.1| Transcription initiation factor TFIID subunit, putative [Ricinus
           communis] gi|223545785|gb|EEF47289.1| Transcription
           initiation factor TFIID subunit, putative [Ricinus
           communis]
          Length = 128

 Score =  204 bits (519), Expect = 6e-51
 Identities = 105/129 (81%), Positives = 114/129 (88%)
 Frame = +2

Query: 77  MQNSTTGGNSASKSKAGTSQPSDTTSFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALLE 256
           M +S TG   +SKSK G+SQPS+T SFKRKRGVFQKDLQHMMYGFGDDPNPLPE+VAL+E
Sbjct: 1   MSSSFTG--PSSKSKVGSSQPSET-SFKRKRGVFQKDLQHMMYGFGDDPNPLPESVALVE 57

Query: 257 DIAVEYVTDLVNKAQDVASKRGKLLTEDFLYLIRKDRPKFNRCTELLSMNEELKQARKAF 436
           DI VEYVTDL +KAQD+ SKRGKL  EDFLYLIRKD PK NRCTELLSM EELKQARKAF
Sbjct: 58  DIVVEYVTDLAHKAQDIGSKRGKLSVEDFLYLIRKDLPKLNRCTELLSMQEELKQARKAF 117

Query: 437 EVDEEKLAT 463
           EVDEEKLA+
Sbjct: 118 EVDEEKLAS 126


>gb|AFL48184.1| TBP-associated factor 13 protein [Capsicum annuum]
          Length = 130

 Score =  202 bits (515), Expect = 2e-50
 Identities = 103/128 (80%), Positives = 116/128 (90%)
 Frame = +2

Query: 77  MQNSTTGGNSASKSKAGTSQPSDTTSFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALLE 256
           M NS+ G   +SK++AG SQPS++ S KRKRG+FQKDLQHMMYGFGDD NPLPETVAL+E
Sbjct: 1   MNNSSAG--PSSKARAGASQPSES-SLKRKRGMFQKDLQHMMYGFGDDSNPLPETVALVE 57

Query: 257 DIAVEYVTDLVNKAQDVASKRGKLLTEDFLYLIRKDRPKFNRCTELLSMNEELKQARKAF 436
           DI V+YVTD+V+KAQDVA+KRGKLLTEDFL+LIRKD PK NRCTELLSMNEELKQARKAF
Sbjct: 58  DIVVDYVTDMVHKAQDVATKRGKLLTEDFLFLIRKDLPKLNRCTELLSMNEELKQARKAF 117

Query: 437 EVDEEKLA 460
           EVDEEKLA
Sbjct: 118 EVDEEKLA 125