BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009654
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA66046.1| atranbp1b [Arabidopsis thaliana]                      106   2e-21
ref|NP_200667.2| Ran-binding protein 1-c [Arabidopsis thaliana] ...   105   4e-21
ref|XP_002866276.1| hypothetical protein ARALYDRAFT_495982 [Arab...   105   4e-21
dbj|BAA97328.1| unnamed protein product [Arabidopsis thaliana]        105   4e-21
ref|XP_002879247.1| hypothetical protein ARALYDRAFT_901981 [Arab...   105   5e-21

>emb|CAA66046.1| atranbp1b [Arabidopsis thaliana]
          Length = 217

 Score =  106 bits (264), Expect = 2e-21
 Identities = 50/92 (54%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
 Frame = -1

Query: 275 GTVKLLNRKITGKVQLIMR-SKSLKIYANHRISSGMLVDVHASNSTSCVWAATDFSEGDS 99
           GTVK +  +++GK++L+MR SK+LKI ANH + SGM V  HA N  SCVW A DFS+G+ 
Sbjct: 74  GTVKFVKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDFSDGEL 133

Query: 98  KEKLFRIQFGSVDNCDTFMQLFRATVEREERE 3
           K++LF I+FGSV+NC  FMQ F+   E EE +
Sbjct: 134 KDELFCIRFGSVENCKAFMQKFKEVAESEEEK 165


>ref|NP_200667.2| Ran-binding protein 1-c [Arabidopsis thaliana]
           gi|75275082|sp|P92985.1|RBP1C_ARATH RecName:
           Full=Ran-binding protein 1 homolog c
           gi|1732511|gb|AAB38776.1| Ran binding protein 1 homolog
           [Arabidopsis thaliana] gi|90568020|gb|ABD94080.1|
           At5g58590 [Arabidopsis thaliana]
           gi|332009690|gb|AED97073.1| Ran-binding protein 1-c
           [Arabidopsis thaliana]
          Length = 219

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/90 (57%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
 Frame = -1

Query: 275 GTVKLLNRKITGKVQLIMR-SKSLKIYANHRISSGMLVDVHASNSTSCVWAATDFSEGDS 99
           GTVKLL  K TGKV+L+MR SK+LKI ANH ISSGM V  H+ N  SC+W ATDFS+G+ 
Sbjct: 71  GTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATDFSDGEL 130

Query: 98  KEKLFRIQFGSVDNCDTFMQLFRATVEREE 9
           K++LF I+F S++NC TFM+ F    E ++
Sbjct: 131 KDELFCIRFASIENCKTFMEKFTEIAESQQ 160


>ref|XP_002866276.1| hypothetical protein ARALYDRAFT_495982 [Arabidopsis lyrata subsp.
           lyrata] gi|297312111|gb|EFH42535.1| hypothetical protein
           ARALYDRAFT_495982 [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/90 (57%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
 Frame = -1

Query: 275 GTVKLLNRKITGKVQLIMR-SKSLKIYANHRISSGMLVDVHASNSTSCVWAATDFSEGDS 99
           GTVKLL  K TGKV+L+MR SK+LKI ANH ISSGM V  H+ N  SC+W ATDFS+G+ 
Sbjct: 71  GTVKLLKHKQTGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATDFSDGEL 130

Query: 98  KEKLFRIQFGSVDNCDTFMQLFRATVEREE 9
           K++LF I+F S++NC TFM+ F    E ++
Sbjct: 131 KDELFCIRFASIENCKTFMEKFTEIAESQQ 160


>dbj|BAA97328.1| unnamed protein product [Arabidopsis thaliana]
          Length = 248

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/90 (57%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
 Frame = -1

Query: 275 GTVKLLNRKITGKVQLIMR-SKSLKIYANHRISSGMLVDVHASNSTSCVWAATDFSEGDS 99
           GTVKLL  K TGKV+L+MR SK+LKI ANH ISSGM V  H+ N  SC+W ATDFS+G+ 
Sbjct: 71  GTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATDFSDGEL 130

Query: 98  KEKLFRIQFGSVDNCDTFMQLFRATVEREE 9
           K++LF I+F S++NC TFM+ F    E ++
Sbjct: 131 KDELFCIRFASIENCKTFMEKFTEIAESQQ 160


>ref|XP_002879247.1| hypothetical protein ARALYDRAFT_901981 [Arabidopsis lyrata subsp.
           lyrata] gi|297325086|gb|EFH55506.1| hypothetical protein
           ARALYDRAFT_901981 [Arabidopsis lyrata subsp. lyrata]
          Length = 220

 Score =  105 bits (261), Expect = 5e-21
 Identities = 50/92 (54%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
 Frame = -1

Query: 275 GTVKLLNRKITGKVQLIMR-SKSLKIYANHRISSGMLVDVHASNSTSCVWAATDFSEGDS 99
           GTVK L  +++GK++L+MR SK+LKI ANH + SGM V  HA N  SCVW A DFS+G+ 
Sbjct: 74  GTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDFSDGEL 133

Query: 98  KEKLFRIQFGSVDNCDTFMQLFRATVEREERE 3
           K++LF I+F SV+NC  FMQ F+   E EE +
Sbjct: 134 KDELFCIRFASVENCKAFMQKFKEVAESEEEK 165