BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009653
         (1054 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...   431   e-118
emb|CBI20740.3| unnamed protein product [Vitis vinifera]              431   e-118
gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium h...   423   e-116
ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a...   405   e-110
ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl...   404   e-110

>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score =  431 bits (1108), Expect = e-118
 Identities = 219/350 (62%), Positives = 265/350 (75%)
 Frame = -2

Query: 1050 SQYKDTDETFKALRKKLLSYHAKILHCLDGLGFLCAYEAAKVCAETARSNSKDECELYRN 871
            +QYKD D+  KALRK+L + HAKIL+CLD LG +CAYEA KVC E   SN+++E E YR 
Sbjct: 294  TQYKDMDDKLKALRKRLSNDHAKILYCLDDLGLICAYEAVKVCIENV-SNAQEEFEFYRQ 352

Query: 870  SFVLCRNFLEDVLHIFEESLPHDYEHFFNMGFDHLKAITMGYISPKLYELVQIFQLLGGS 691
            S   C+ FL++VL I    LPH   ++ N   D LKA+  GYI+PKL+EL+Q+FQ  G +
Sbjct: 353  SSSQCKCFLQEVLGIIGGYLPHGDGNYLNSESDILKAVDKGYITPKLHELLQLFQSFGVA 412

Query: 690  RELRCLIFVERIIAAKVIERFMRKVSSLSHLTVSYLTGGGASVDALTRTMQKKTLESFRC 511
            R++ CLIFVERII AKVIERF++K+  LSH TVSYLTG  +SVDAL    Q++TLESFR 
Sbjct: 413  RKVLCLIFVERIITAKVIERFIKKIIYLSHFTVSYLTGSNSSVDALAPKAQRETLESFRS 472

Query: 510  GKVNLLFTTDVLEEGIDVPSCSCVIRFDLPKTVRSYVQSRGRARQNGSRYVLMLERGNIE 331
            GKVNLLF TDV+EEGI VP+CSCVIRFDLPKTVRSYVQSRGRARQ+ S++++MLERGN E
Sbjct: 473  GKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRARQSDSQFIIMLERGNTE 532

Query: 330  QRDMLYDLIRSEHSMTDSALTRDPNACISKVCDTEEPDMYVVRSTGASVTADSCVSLIFR 151
            QRD L+D+IRSE+SMTD+A  RDP+    K    EE D Y V STGASVTADS VSLI R
Sbjct: 533  QRDQLFDIIRSEYSMTDTATNRDPDGYTLKAYTIEEMDSYFVDSTGASVTADSSVSLIHR 592

Query: 150  YCEKLPGDMYFTPKPKFQMILSGGLYECELTLPPSAPIQKLTGHQARNTH 1
            YCEKLPGD YFTPKP F      G+YEC+LTLPP+A  Q + G   +N+H
Sbjct: 593  YCEKLPGDKYFTPKPFFHFTYLEGMYECKLTLPPNAAFQTIIGPGNKNSH 642


>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score =  431 bits (1108), Expect = e-118
 Identities = 219/350 (62%), Positives = 265/350 (75%)
 Frame = -2

Query: 1050 SQYKDTDETFKALRKKLLSYHAKILHCLDGLGFLCAYEAAKVCAETARSNSKDECELYRN 871
            +QYKD D+  KALRK+L + HAKIL+CLD LG +CAYEA KVC E   SN+++E E YR 
Sbjct: 302  TQYKDMDDKLKALRKRLSNDHAKILYCLDDLGLICAYEAVKVCIENV-SNAQEEFEFYRQ 360

Query: 870  SFVLCRNFLEDVLHIFEESLPHDYEHFFNMGFDHLKAITMGYISPKLYELVQIFQLLGGS 691
            S   C+ FL++VL I    LPH   ++ N   D LKA+  GYI+PKL+EL+Q+FQ  G +
Sbjct: 361  SSSQCKCFLQEVLGIIGGYLPHGDGNYLNSESDILKAVDKGYITPKLHELLQLFQSFGVA 420

Query: 690  RELRCLIFVERIIAAKVIERFMRKVSSLSHLTVSYLTGGGASVDALTRTMQKKTLESFRC 511
            R++ CLIFVERII AKVIERF++K+  LSH TVSYLTG  +SVDAL    Q++TLESFR 
Sbjct: 421  RKVLCLIFVERIITAKVIERFIKKIIYLSHFTVSYLTGSNSSVDALAPKAQRETLESFRS 480

Query: 510  GKVNLLFTTDVLEEGIDVPSCSCVIRFDLPKTVRSYVQSRGRARQNGSRYVLMLERGNIE 331
            GKVNLLF TDV+EEGI VP+CSCVIRFDLPKTVRSYVQSRGRARQ+ S++++MLERGN E
Sbjct: 481  GKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRARQSDSQFIIMLERGNTE 540

Query: 330  QRDMLYDLIRSEHSMTDSALTRDPNACISKVCDTEEPDMYVVRSTGASVTADSCVSLIFR 151
            QRD L+D+IRSE+SMTD+A  RDP+    K    EE D Y V STGASVTADS VSLI R
Sbjct: 541  QRDQLFDIIRSEYSMTDTATNRDPDGYTLKAYTIEEMDSYFVDSTGASVTADSSVSLIHR 600

Query: 150  YCEKLPGDMYFTPKPKFQMILSGGLYECELTLPPSAPIQKLTGHQARNTH 1
            YCEKLPGD YFTPKP F      G+YEC+LTLPP+A  Q + G   +N+H
Sbjct: 601  YCEKLPGDKYFTPKPFFHFTYLEGMYECKLTLPPNAAFQTIIGPGNKNSH 650


>gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum]
          Length = 1655

 Score =  423 bits (1087), Expect = e-116
 Identities = 211/352 (59%), Positives = 270/352 (76%), Gaps = 2/352 (0%)
 Frame = -2

Query: 1050 SQYKDTDETFKALRKKLLSYHAKILHCLDGLGFLCAYEAAKVCAETARSNSKDECELYRN 871
            + +KD D+  K LRK+L + HAK+LHCLD LG +CAYEA  +C E     + +E + YR 
Sbjct: 293  TSHKDMDDKLKNLRKRLSNDHAKVLHCLDNLGLICAYEAVNICLENILDTT-EESKAYRE 351

Query: 870  SFVLCRNFLEDVLHIFEESLPHDYEHFFNMGFDHLKAITMGYISPKLYELVQIFQLLGGS 691
            S +  +NFLE+V     ESLP   ++F N GFD+LKA+ +GYISPKL+EL+Q+FQ  G +
Sbjct: 352  SVLQYKNFLEEVQCRIGESLPLGDKNFLNSGFDYLKAVDLGYISPKLHELLQLFQSFGET 411

Query: 690  RELRCLIFVERIIAAKVIERFMRKVSSLSHLTVSYLTGGGASVDALTRTMQKKTLESFRC 511
            R++ CLIFVERII AKVIERF +KVS LSH  VSY+TG   SVD+L   +QK+TLESFR 
Sbjct: 412  RQVLCLIFVERIITAKVIERFAKKVSCLSHFMVSYMTGSNTSVDSLAPKIQKETLESFRS 471

Query: 510  GKVNLLFTTDVLEEGIDVPSCSCVIRFDLPKTVRSYVQSRGRARQNGSRYVLMLERGNIE 331
            GKVNLLFTTDV+EEGI VP+C  VIRFDLPKTVRSYVQSRGRARQN S +++MLERGN++
Sbjct: 472  GKVNLLFTTDVVEEGIHVPNCCYVIRFDLPKTVRSYVQSRGRARQNNSEFIMMLERGNVK 531

Query: 330  QRDMLYDLIRSEHSMTDSALTRDPNA--CISKVCDTEEPDMYVVRSTGASVTADSCVSLI 157
            QR+ LYD+IRSE+SMT+SA+ RDP++  C+ K    EE ++++V +TGASVTADS VSLI
Sbjct: 532  QRNQLYDIIRSEYSMTNSAIKRDPDSDPCLLKDHTFEETNVFIVDATGASVTADSAVSLI 591

Query: 156  FRYCEKLPGDMYFTPKPKFQMILSGGLYECELTLPPSAPIQKLTGHQARNTH 1
             +YC KLPGD Y+TPKP FQ   S GLY+C+LTLP +A +Q + G  +RN+H
Sbjct: 592  HKYCGKLPGDKYYTPKPNFQFTSSEGLYKCKLTLPVNAAVQTIVGPPSRNSH 643


>ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Cucumis sativus]
          Length = 1359

 Score =  405 bits (1040), Expect = e-110
 Identities = 202/348 (58%), Positives = 265/348 (76%)
 Frame = -2

Query: 1044 YKDTDETFKALRKKLLSYHAKILHCLDGLGFLCAYEAAKVCAETARSNSKDECELYRNSF 865
            YKD D   KAL+K+L S H KI +CLD LG +CAYEA KV  E   S   +E ++YR SF
Sbjct: 289  YKDVDSKLKALKKRLSSDHLKITYCLDELGIMCAYEAIKVLFENV-SVPNEESDVYRESF 347

Query: 864  VLCRNFLEDVLHIFEESLPHDYEHFFNMGFDHLKAITMGYISPKLYELVQIFQLLGGSRE 685
            +  ++FLE+ L +  ESL  + E+   +GFD  KA+ +GYISPKL+EL+Q+F+  G SR+
Sbjct: 348  LQYKHFLEEALLVIGESLSLENENVPTLGFDLWKAVELGYISPKLFELLQLFESFGVSRQ 407

Query: 684  LRCLIFVERIIAAKVIERFMRKVSSLSHLTVSYLTGGGASVDALTRTMQKKTLESFRCGK 505
            + CLIFVERIIAA VIER ++KV +LSH TVSY+TG  ASV AL   +QK+TLE F  GK
Sbjct: 408  VLCLIFVERIIAANVIERIVKKVENLSHFTVSYVTGCNASVGALAPKVQKETLELFCHGK 467

Query: 504  VNLLFTTDVLEEGIDVPSCSCVIRFDLPKTVRSYVQSRGRARQNGSRYVLMLERGNIEQR 325
            +NLLF+TDV+EEG+ VP+CS V+RFDLPKTVRSYVQSRGRARQN S+Y+L+LERGN++QR
Sbjct: 468  LNLLFSTDVVEEGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQNNSQYILLLERGNLKQR 527

Query: 324  DMLYDLIRSEHSMTDSALTRDPNACISKVCDTEEPDMYVVRSTGASVTADSCVSLIFRYC 145
             +L+D+IRS+ SMTD+A++RD +AC+ K     E D Y+V +TGASVTADS V L+++YC
Sbjct: 528  ALLFDVIRSDRSMTDAAMSRDLDACVLKPFSLMETDCYIVEATGASVTADSSVGLVYQYC 587

Query: 144  EKLPGDMYFTPKPKFQMILSGGLYECELTLPPSAPIQKLTGHQARNTH 1
            +KLPGD YF+PKP FQ+    G YEC+LTLPP+A +Q + G   RN++
Sbjct: 588  KKLPGDKYFSPKPIFQLSYGEGSYECQLTLPPTAALQTIVGPSTRNSN 635


>ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
            3a-like [Cucumis sativus]
          Length = 1639

 Score =  404 bits (1039), Expect = e-110
 Identities = 202/348 (58%), Positives = 265/348 (76%)
 Frame = -2

Query: 1044 YKDTDETFKALRKKLLSYHAKILHCLDGLGFLCAYEAAKVCAETARSNSKDECELYRNSF 865
            YKD D   KAL+K+L S H KI +CLD LG +CAYEA KV  E   S   +E ++YR SF
Sbjct: 289  YKDVDSKLKALKKRLSSDHLKITYCLDELGIMCAYEAIKVLFENV-SVPNEESDVYRESF 347

Query: 864  VLCRNFLEDVLHIFEESLPHDYEHFFNMGFDHLKAITMGYISPKLYELVQIFQLLGGSRE 685
            +  ++FLE+ L +  ESL  + E+   +GFD  KA+ +GYISPKL+EL+Q+F+  G SR+
Sbjct: 348  LQYKHFLEEALLVIGESLSLENENVPTLGFDLWKAVELGYISPKLFELLQLFESFGVSRQ 407

Query: 684  LRCLIFVERIIAAKVIERFMRKVSSLSHLTVSYLTGGGASVDALTRTMQKKTLESFRCGK 505
            + CLIFVERIIAA VIER ++KV +LSH TVSY+TG  ASV AL   +QK+TLE F  GK
Sbjct: 408  VLCLIFVERIIAANVIERIVKKVENLSHFTVSYVTGCDASVGALAPKVQKETLELFCHGK 467

Query: 504  VNLLFTTDVLEEGIDVPSCSCVIRFDLPKTVRSYVQSRGRARQNGSRYVLMLERGNIEQR 325
            +NLLF+TDV+EEG+ VP+CS V+RFDLPKTVRSYVQSRGRARQN S+Y+L+LERGN++QR
Sbjct: 468  LNLLFSTDVVEEGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQNNSQYILLLERGNLKQR 527

Query: 324  DMLYDLIRSEHSMTDSALTRDPNACISKVCDTEEPDMYVVRSTGASVTADSCVSLIFRYC 145
             +L+D+IRS+ SMTD+A++RD +AC+ K     E D Y+V +TGASVTADS V L+++YC
Sbjct: 528  ALLFDVIRSDRSMTDAAMSRDLDACVLKPFSLMETDCYIVEATGASVTADSSVGLVYQYC 587

Query: 144  EKLPGDMYFTPKPKFQMILSGGLYECELTLPPSAPIQKLTGHQARNTH 1
            +KLPGD YF+PKP FQ+    G YEC+LTLPP+A +Q + G   RN++
Sbjct: 588  KKLPGDKYFSPKPIFQLSYGEGSYECQLTLPPTAALQTIVGPSTRNSN 635