BLASTX nr result
ID: Coptis25_contig00009647
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00009647
(763 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631291.1| PREDICTED: uncharacterized WD repeat-contain... 248 1e-63
emb|CAN76269.1| hypothetical protein VITISV_004097 [Vitis vinifera] 248 1e-63
ref|XP_002321562.1| predicted protein [Populus trichocarpa] gi|2... 244 2e-62
ref|XP_003517744.1| PREDICTED: uncharacterized WD repeat-contain... 242 6e-62
ref|XP_002280390.1| PREDICTED: uncharacterized WD repeat-contain... 237 2e-60
>ref|XP_003631291.1| PREDICTED: uncharacterized WD repeat-containing protein
alr3466-like [Vitis vinifera]
Length = 427
Score = 248 bits (633), Expect = 1e-63
Identities = 135/244 (55%), Positives = 153/244 (62%), Gaps = 2/244 (0%)
Frame = +2
Query: 2 DRTFKIWRTSDFRCLESVXXXXXXXXXXXXVSNNGFVYTGSADNKIKVWNKAYGDKKHSL 181
DRTFKIW+T+DFRCLES +S +G VYTGSAD KIKVW K G+KKH L
Sbjct: 223 DRTFKIWKTTDFRCLESAEKAHDDAINALVLSTDGIVYTGSADRKIKVWKKHEGEKKHRL 282
Query: 182 VDTLEKHRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVNALALSSDGSILYSG 361
V TLEKH+S VNALALS DGS+LYSG
Sbjct: 283 VATLEKHKSA----------------------------------VNALALSPDGSVLYSG 308
Query: 362 ACDRSIVVWEKXXXXXXXXXXXXXEAHMVVVGALRGHTKAVLCLAIVSDLVCSGSADKTV 541
ACDRSI+VWEK HMVV GALRGHTKA+LCLAIVSDLV SGSADKTV
Sbjct: 309 ACDRSIIVWEKDTSSSG--------GHMVVAGALRGHTKAILCLAIVSDLVFSGSADKTV 360
Query: 542 RIWRRGVGRCYSCLAVLEGHNGPVKCLTAK-DDYN-XXXXXXXXXYLVYSGSLDCDIKIW 715
RIW++G+ R YSCLAV EGH GPVKCLTA D+YN YL+YSGSLDC+IK+W
Sbjct: 361 RIWKKGLQRSYSCLAVFEGHRGPVKCLTAAVDNYNGRSNSDDDAAYLIYSGSLDCEIKVW 420
Query: 716 QISL 727
Q+ +
Sbjct: 421 QLRI 424
Score = 61.2 bits (147), Expect = 2e-07
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 2/137 (1%)
Frame = +2
Query: 314 VNALALSSDGSILYSGACDRSIVVWEKXXXXXXXXXXXXXEAHMVVVGALRGHTKAVLCL 493
++ALALS DGS+LYS + DR+ +W+ + A + H A+ L
Sbjct: 205 ISALALSEDGSLLYSASWDRTFKIWKTTD-------------FRCLESAEKAHDDAINAL 251
Query: 494 AIVSD-LVCSGSADKTVRIWRRGVG-RCYSCLAVLEGHNGPVKCLTAKDDYNXXXXXXXX 667
+ +D +V +GSAD+ +++W++ G + + +A LE H V L D +
Sbjct: 252 VLSTDGIVYTGSADRKIKVWKKHEGEKKHRLVATLEKHKSAVNALALSPDGS-------- 303
Query: 668 XYLVYSGSLDCDIKIWQ 718
++YSG+ D I +W+
Sbjct: 304 --VLYSGACDRSIIVWE 318
>emb|CAN76269.1| hypothetical protein VITISV_004097 [Vitis vinifera]
Length = 507
Score = 248 bits (632), Expect = 1e-63
Identities = 134/244 (54%), Positives = 153/244 (62%), Gaps = 2/244 (0%)
Frame = +2
Query: 2 DRTFKIWRTSDFRCLESVXXXXXXXXXXXXVSNNGFVYTGSADNKIKVWNKAYGDKKHSL 181
DRTFKIW+T+DFRCLES +S +G VYTGSAD KIKVW K G+KKH L
Sbjct: 303 DRTFKIWKTTDFRCLESAEKAHDDAINALVLSTDGIVYTGSADRKIKVWKKHEGEKKHRL 362
Query: 182 VDTLEKHRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVNALALSSDGSILYSG 361
V TLEKH+S VNALALS DGS+LYSG
Sbjct: 363 VATLEKHKSA----------------------------------VNALALSPDGSVLYSG 388
Query: 362 ACDRSIVVWEKXXXXXXXXXXXXXEAHMVVVGALRGHTKAVLCLAIVSDLVCSGSADKTV 541
ACDRSI+VWEK HMVV GALRGHTKA+LCLA+VSDLV SGSADKTV
Sbjct: 389 ACDRSIIVWEKDTSSSG--------GHMVVAGALRGHTKAILCLAVVSDLVFSGSADKTV 440
Query: 542 RIWRRGVGRCYSCLAVLEGHNGPVKCLTAK-DDYN-XXXXXXXXXYLVYSGSLDCDIKIW 715
RIW++G+ R YSCLAV EGH GPVKCLTA D+YN YL+YSGSLDC+IK+W
Sbjct: 441 RIWKKGLQRSYSCLAVFEGHRGPVKCLTAAVDNYNGRSNSDDDAAYLIYSGSLDCEIKVW 500
Query: 716 QISL 727
Q+ +
Sbjct: 501 QLRI 504
Score = 61.2 bits (147), Expect = 2e-07
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 2/137 (1%)
Frame = +2
Query: 314 VNALALSSDGSILYSGACDRSIVVWEKXXXXXXXXXXXXXEAHMVVVGALRGHTKAVLCL 493
++ALALS DGS+LYS + DR+ +W+ + A + H A+ L
Sbjct: 285 ISALALSEDGSLLYSASWDRTFKIWKTTD-------------FRCLESAEKAHDDAINAL 331
Query: 494 AIVSD-LVCSGSADKTVRIWRRGVG-RCYSCLAVLEGHNGPVKCLTAKDDYNXXXXXXXX 667
+ +D +V +GSAD+ +++W++ G + + +A LE H V L D +
Sbjct: 332 VLSTDGIVYTGSADRKIKVWKKHEGEKKHRLVATLEKHKSAVNALALSPDGS-------- 383
Query: 668 XYLVYSGSLDCDIKIWQ 718
++YSG+ D I +W+
Sbjct: 384 --VLYSGACDRSIIVWE 398
>ref|XP_002321562.1| predicted protein [Populus trichocarpa] gi|222868558|gb|EEF05689.1|
predicted protein [Populus trichocarpa]
Length = 346
Score = 244 bits (622), Expect = 2e-62
Identities = 134/243 (55%), Positives = 156/243 (64%)
Frame = +2
Query: 2 DRTFKIWRTSDFRCLESVXXXXXXXXXXXXVSNNGFVYTGSADNKIKVWNKAYGDKKHSL 181
DRT KIWRT+DF+CLESV +SN+G VYTGSAD KIKVW K+ + KHSL
Sbjct: 153 DRTIKIWRTNDFKCLESVANAHDDAINAVALSNDGNVYTGSADKKIKVWRKSSEENKHSL 212
Query: 182 VDTLEKHRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVNALALSSDGSILYSG 361
V TLEKH SG +NALALS+DGS+LYSG
Sbjct: 213 VATLEKHMSG----------------------------------INALALSTDGSVLYSG 238
Query: 362 ACDRSIVVWEKXXXXXXXXXXXXXEAHMVVVGALRGHTKAVLCLAIVSDLVCSGSADKTV 541
ACDRSIVVWEK + +MVV+GALRGHT+++LCLA+VSDLV SGSADKT+
Sbjct: 239 ACDRSIVVWEKDD-----------DGNMVVLGALRGHTQSILCLAVVSDLVFSGSADKTI 287
Query: 542 RIWRRGVGRCYSCLAVLEGHNGPVKCLTAKDDYNXXXXXXXXXYLVYSGSLDCDIKIWQI 721
RIW RGV R YSCLAVLEGH GPVKCLTA D +L+YSGSLDCDIK+WQI
Sbjct: 288 RIW-RGVDRSYSCLAVLEGHGGPVKCLTASID---RRSSSDASFLLYSGSLDCDIKVWQI 343
Query: 722 SLP 730
++P
Sbjct: 344 NVP 346
>ref|XP_003517744.1| PREDICTED: uncharacterized WD repeat-containing protein
alr3466-like [Glycine max]
Length = 433
Score = 242 bits (618), Expect = 6e-62
Identities = 130/249 (52%), Positives = 150/249 (60%), Gaps = 4/249 (1%)
Frame = +2
Query: 2 DRTFKIWRTSDFRCLESVXXXXXXXXXXXXVSNNGFVYTGSADNKIKVWNKAYGDKKHSL 181
DRTFKIWRTSDF+CLESV +SNNGFVYTGSAD +IK+W K G+KKHSL
Sbjct: 225 DRTFKIWRTSDFKCLESVKNAHEDAINSLVLSNNGFVYTGSADTRIKMWKKLEGEKKHSL 284
Query: 182 VDTLEKHRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVNALALSSDGSILYSG 361
+ TLEKH+S VNALAL+SDGS+LYSG
Sbjct: 285 IGTLEKHKSA----------------------------------VNALALNSDGSVLYSG 310
Query: 362 ACDRSIVVWEKXXXXXXXXXXXXXEAHMVVVGALRGHTKAVLCLAIVSDLVCSGSADKTV 541
ACDRSI+VWE MV+VGALRGHTKA+LCL +V+DLVCSGSAD +V
Sbjct: 311 ACDRSILVWESDQNENNNT--------MVLVGALRGHTKAILCLVVVADLVCSGSADNSV 362
Query: 542 RIWRRGVGRCYSCLAVLEGHNGPVKCLTAKDDYN----XXXXXXXXXYLVYSGSLDCDIK 709
R+WRRG + YSCLAV EGH PVKCL D N YLVYS LDC+IK
Sbjct: 363 RVWRRGAEKSYSCLAVFEGHRRPVKCLAMAVDSNSGGPREDDHNSSSYLVYSAGLDCEIK 422
Query: 710 IWQISLPPL 736
+WQI +P L
Sbjct: 423 VWQIRVPSL 431
>ref|XP_002280390.1| PREDICTED: uncharacterized WD repeat-containing protein
alr3466-like [Vitis vinifera]
Length = 409
Score = 237 bits (605), Expect = 2e-60
Identities = 132/246 (53%), Positives = 155/246 (63%), Gaps = 1/246 (0%)
Frame = +2
Query: 2 DRTFKIWRTSDFRCLESVXXXXXXXXXXXXVSNNGFVYTGSADNKIKVWNKAYGDKKHSL 181
DR+ KIWRT+DF+CLESV +S++G++YTGSAD IKVW KA DKKHS
Sbjct: 212 DRSLKIWRTTDFKCLESVGNAHDDAINALALSHDGYIYTGSADKTIKVWRKAPEDKKHSQ 271
Query: 182 VDTLEKHRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVNALALSSDGSILYSG 361
V TLEKH SG +NALALS+DGS+LYSG
Sbjct: 272 VATLEKHNSG----------------------------------INALALSTDGSVLYSG 297
Query: 362 ACDRSIVVWEKXXXXXXXXXXXXXEAHMVVVGALRGHTKAVLCLAIVSDLVCSGSADKTV 541
A DRSIVVWEK +MVVVGALRGH+K++LCLA+VSD+V SGSAD T+
Sbjct: 298 ASDRSIVVWEKDY-----------SGNMVVVGALRGHSKSILCLAVVSDVVFSGSADNTI 346
Query: 542 RIWRRGVGRCYSCLAVLEGHNGPVKCLTAKDD-YNXXXXXXXXXYLVYSGSLDCDIKIWQ 718
RIW RG+ + YSCLA+LEGH GPVKCLTA D YN YLVYSGSLDCDIK+WQ
Sbjct: 347 RIW-RGIHKSYSCLAILEGHTGPVKCLTAATDCYN--PSNTSTSYLVYSGSLDCDIKVWQ 403
Query: 719 ISLPPL 736
I +P L
Sbjct: 404 IFIPLL 409
Score = 60.8 bits (146), Expect = 3e-07
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Frame = +2
Query: 314 VNALALSSDGSILYSGACDRSIVVWEKXXXXXXXXXXXXXEAHMVVVGALRGHTKAVLCL 493
V+ LALS D S+LYS + DRS+ +W + VG H A+ L
Sbjct: 194 VSVLALSEDNSLLYSVSWDRSLKIWRTTDFKC-----------LESVG--NAHDDAINAL 240
Query: 494 AIVSD-LVCSGSADKTVRIWRRG-VGRCYSCLAVLEGHNGPVKCLTAKDDYNXXXXXXXX 667
A+ D + +GSADKT+++WR+ + +S +A LE HN + L D +
Sbjct: 241 ALSHDGYIYTGSADKTIKVWRKAPEDKKHSQVATLEKHNSGINALALSTDGS-------- 292
Query: 668 XYLVYSGSLDCDIKIWQ 718
++YSG+ D I +W+
Sbjct: 293 --VLYSGASDRSIVVWE 307