BLASTX nr result

ID: Coptis25_contig00009646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009646
         (915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95845.1| unknown [Populus trichocarpa]                          216   8e-54
ref|XP_002863905.1| histidine triad family protein [Arabidopsis ...   214   2e-53
ref|XP_002303075.1| predicted protein [Populus trichocarpa] gi|2...   213   7e-53
ref|XP_004146949.1| PREDICTED: uncharacterized HIT-like protein ...   211   2e-52
ref|XP_002533497.1| histidine triad (hit) protein, putative [Ric...   210   3e-52

>gb|ABK95845.1| unknown [Populus trichocarpa]
          Length = 197

 Score =  216 bits (549), Expect = 8e-54
 Identities = 107/197 (54%), Positives = 140/197 (71%), Gaps = 3/197 (1%)
 Frame = -2

Query: 851 MEARRRLSVLCSHIVPVDKELFSGISML---SCAANDGQCMKGSEEKDCVFCKIIRGELP 681
           ME+R RLS++CSH++P      S +S     S + ND      + + DCVFC+I+RGE P
Sbjct: 1   MESRSRLSIICSHLLPGSPSPPSRLSSSITSSASINDAAGDTRNHQLDCVFCRIVRGESP 60

Query: 680 SFKVHEDDVCICILDLNPLSHGHSLLIPKCHFSSLKCTPPSVVASMCSKIPFLSSAIMKA 501
           +FK++ED+ C+CILD +PLS GHSL+IPK HFS L+ TPPSVVA+MCSK+P + +AIMKA
Sbjct: 61  AFKLYEDETCLCILDSSPLSPGHSLIIPKSHFSCLEATPPSVVAAMCSKVPSIGNAIMKA 120

Query: 500 TNCDSFNVVSNNGGAAGQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGETDELAGSI 321
              DSFN++ NNG AAGQVIFHTH+HIIPRK  D LW +E+  R+PL    E  +L   +
Sbjct: 121 NGSDSFNLLVNNGAAAGQVIFHTHIHIIPRKARDCLWTTESLRRRPLNFDQEASQLVNRV 180

Query: 320 RKQLSMNTSHEDVKD*R 270
           R+QLS + S ED KD R
Sbjct: 181 REQLS-SISPEDGKDSR 196


>ref|XP_002863905.1| histidine triad family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309740|gb|EFH40164.1| histidine triad family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 198

 Score =  214 bits (545), Expect = 2e-53
 Identities = 106/187 (56%), Positives = 135/187 (72%), Gaps = 6/187 (3%)
 Frame = -2

Query: 851 MEARRRLSVLCSHIVPV------DKELFSGISMLSCAANDGQCMKGSEEKDCVFCKIIRG 690
           MEARR L++LCSH+ P       D  L       S ++ DG+    + + DCVFCKIIRG
Sbjct: 1   MEARR-LAILCSHLNPPGPNPTRDPILRVSDCSSSASSGDGKVESSNLQNDCVFCKIIRG 59

Query: 689 ELPSFKVHEDDVCICILDLNPLSHGHSLLIPKCHFSSLKCTPPSVVASMCSKIPFLSSAI 510
           E P  K++EDD+C+CILD NPLSHGHSL+IPK H+ +L+ TPPSVVA+MCSK+P +S+AI
Sbjct: 60  ESPCLKLYEDDMCLCILDTNPLSHGHSLIIPKLHYPTLEETPPSVVAAMCSKVPLISNAI 119

Query: 509 MKATNCDSFNVVSNNGGAAGQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGETDELA 330
           +KAT  DSFN++ NNG AAGQVIFHTH+HIIPRK+ D LW SE+  R  LKL  E  +L 
Sbjct: 120 VKATGSDSFNLLVNNGAAAGQVIFHTHIHIIPRKERDCLWASESLRRHTLKLDKEASQLV 179

Query: 329 GSIRKQL 309
             +R+QL
Sbjct: 180 SRVRQQL 186


>ref|XP_002303075.1| predicted protein [Populus trichocarpa] gi|222844801|gb|EEE82348.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  213 bits (541), Expect = 7e-53
 Identities = 101/185 (54%), Positives = 133/185 (71%), Gaps = 3/185 (1%)
 Frame = -2

Query: 851 MEARRRLSVLCSHIVPVDKELFSGISML---SCAANDGQCMKGSEEKDCVFCKIIRGELP 681
           ME+R RLS++CSH++P      S +S     S + ND      + + DCVFC+I+RGE P
Sbjct: 1   MESRSRLSIICSHLLPGSPSPTSRLSSSITSSASINDAAGDTRNHQLDCVFCRIVRGESP 60

Query: 680 SFKVHEDDVCICILDLNPLSHGHSLLIPKCHFSSLKCTPPSVVASMCSKIPFLSSAIMKA 501
           +FK++ED+ C+CILD +PLS GHSL+IPK HFS L+ TPPSVVA+MCSK+P + +AIMKA
Sbjct: 61  AFKLYEDETCLCILDSSPLSPGHSLIIPKSHFSCLEATPPSVVAAMCSKVPSIGNAIMKA 120

Query: 500 TNCDSFNVVSNNGGAAGQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGETDELAGSI 321
              DSFN++ NNG AAGQVIFHTH+HIIPRK  D LW +E+  R+PL    E  +L   +
Sbjct: 121 NGSDSFNLLVNNGAAAGQVIFHTHIHIIPRKARDCLWTTESLRRRPLNFDQEASQLVNRV 180

Query: 320 RKQLS 306
           R+QLS
Sbjct: 181 REQLS 185


>ref|XP_004146949.1| PREDICTED: uncharacterized HIT-like protein Rv1262c/MT1300-like
           [Cucumis sativus] gi|449526732|ref|XP_004170367.1|
           PREDICTED: uncharacterized HIT-like protein
           Rv1262c/MT1300-like [Cucumis sativus]
          Length = 208

 Score =  211 bits (537), Expect = 2e-52
 Identities = 107/191 (56%), Positives = 137/191 (71%), Gaps = 10/191 (5%)
 Frame = -2

Query: 851 MEARRRLSVLCSHIVPVD----KELFSGISMLSCAANDGQ------CMKGSEEKDCVFCK 702
           MEARR L++LCSH+ PV+          +S  SCA+            KGS + DCVFCK
Sbjct: 1   MEARR-LAILCSHLCPVNLGSSPAPLLNLSSSSCASGSKSEHLIYDSQKGSLQDDCVFCK 59

Query: 701 IIRGELPSFKVHEDDVCICILDLNPLSHGHSLLIPKCHFSSLKCTPPSVVASMCSKIPFL 522
           IIRGE P+FK+++DD C+CILD  PLS+GH+L+IPK H+SSL+ TPPSV+A+MCSK+P +
Sbjct: 60  IIRGEAPAFKLYDDDSCLCILDTKPLSNGHALIIPKSHYSSLEATPPSVIAAMCSKVPII 119

Query: 521 SSAIMKATNCDSFNVVSNNGGAAGQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGET 342
           S+AIMK+T  DSFN++ NNG AAGQVIFHTH+HIIPRK  D LW SE+  R+ LK   E 
Sbjct: 120 SNAIMKSTGSDSFNLLVNNGVAAGQVIFHTHIHIIPRKARDCLWASESLERRTLKFDEEA 179

Query: 341 DELAGSIRKQL 309
             LA SI++ L
Sbjct: 180 SRLAKSIQEIL 190


>ref|XP_002533497.1| histidine triad (hit) protein, putative [Ricinus communis]
           gi|223526641|gb|EEF28884.1| histidine triad (hit)
           protein, putative [Ricinus communis]
          Length = 214

 Score =  210 bits (535), Expect = 3e-52
 Identities = 103/194 (53%), Positives = 133/194 (68%), Gaps = 16/194 (8%)
 Frame = -2

Query: 839 RRLSVLCSHIVPVDKELFSG---------ISMLSCAANDGQCMKGSEE-------KDCVF 708
           RRL+VL SH+ P+     SG         +S  SC ++       S+         DCVF
Sbjct: 6   RRLAVLSSHLCPIASFSGSGSGSGQDHASLSCYSCISDSNNERLSSDSIEIENQPHDCVF 65

Query: 707 CKIIRGELPSFKVHEDDVCICILDLNPLSHGHSLLIPKCHFSSLKCTPPSVVASMCSKIP 528
           C+IIRGE P+FK++EDD C+CILD +PLSHGHSL+IPK H+ SL+ TPPSVVA+MCSK+P
Sbjct: 66  CRIIRGESPAFKLYEDDTCLCILDTSPLSHGHSLIIPKSHYPSLEATPPSVVAAMCSKVP 125

Query: 527 FLSSAIMKATNCDSFNVVSNNGGAAGQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSG 348
           F+ +AIM+AT  DSFN++ NNG AAGQVIFHTH+HIIPRK+ D LW SE+  R+PL    
Sbjct: 126 FIGNAIMRATGSDSFNLLVNNGAAAGQVIFHTHIHIIPRKESDCLWTSESIQRRPLNFDH 185

Query: 347 ETDELAGSIRKQLS 306
              +L   +R+QLS
Sbjct: 186 RASQLVNLVREQLS 199


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