BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009632
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523967.1| 50S ribosomal protein L3, putative [Ricinus ...    77   1e-12
ref|XP_003604074.1| 50S ribosomal protein L3 [Medicago truncatul...    77   2e-12
ref|XP_002319213.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
dbj|BAD10375.1| putative 50S ribosomal protein L3 [Oryza sativa ...    76   2e-12
gb|ABS44864.1| putative 50S ribosomal protein L3 [Oryza sativa J...    76   2e-12

>ref|XP_002523967.1| 50S ribosomal protein L3, putative [Ricinus communis]
           gi|223536694|gb|EEF38335.1| 50S ribosomal protein L3,
           putative [Ricinus communis]
          Length = 285

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/41 (90%), Positives = 39/41 (95%)
 Frame = -1

Query: 358 RIVKIDEDLRIVMIQGALPGKPGNLLRIAPAKIVGKNIPKN 236
           +IVKID DLR VMI+GALPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 245 KIVKIDNDLRAVMIKGALPGKPGNLLRIAPAKIVGKNIPKN 285


>ref|XP_003604074.1| 50S ribosomal protein L3 [Medicago truncatula]
           gi|355493122|gb|AES74325.1| 50S ribosomal protein L3
           [Medicago truncatula]
          Length = 272

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/41 (85%), Positives = 40/41 (97%)
 Frame = -1

Query: 358 RIVKIDEDLRIVMIQGALPGKPGNLLRIAPAKIVGKNIPKN 236
           +IVKID+DL ++MI+GALPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 232 KIVKIDKDLNVIMIKGALPGKPGNLLRIAPAKIVGKNIPKN 272


>ref|XP_002319213.1| predicted protein [Populus trichocarpa] gi|222857589|gb|EEE95136.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/41 (87%), Positives = 40/41 (97%)
 Frame = -1

Query: 358 RIVKIDEDLRIVMIQGALPGKPGNLLRIAPAKIVGKNIPKN 236
           +IVKID DLR+VMI+GALPGKPGNLLRIAPAKIVGKNIPK+
Sbjct: 182 KIVKIDNDLRVVMIKGALPGKPGNLLRIAPAKIVGKNIPKS 222


>dbj|BAD10375.1| putative 50S ribosomal protein L3 [Oryza sativa Japonica Group]
           gi|42409256|dbj|BAD10519.1| putative 50S ribosomal
           protein L3 [Oryza sativa Japonica Group]
          Length = 215

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/41 (85%), Positives = 40/41 (97%)
 Frame = -1

Query: 358 RIVKIDEDLRIVMIQGALPGKPGNLLRIAPAKIVGKNIPKN 236
           +IVKID DL++VMI+GA+PGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 175 KIVKIDNDLKVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 215


>gb|ABS44864.1| putative 50S ribosomal protein L3 [Oryza sativa Japonica Group]
          Length = 188

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/41 (85%), Positives = 40/41 (97%)
 Frame = -1

Query: 358 RIVKIDEDLRIVMIQGALPGKPGNLLRIAPAKIVGKNIPKN 236
           +IVKID DL++VMI+GA+PGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 148 KIVKIDNDLKVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN 188