BLASTX nr result
ID: Coptis25_contig00009620
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00009620
(1831 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002326784.1| predicted protein [Populus trichocarpa] gi|2... 683 0.0
ref|XP_002273482.2| PREDICTED: rop guanine nucleotide exchange f... 677 0.0
emb|CBI29214.3| unnamed protein product [Vitis vinifera] 657 0.0
emb|CAN76404.1| hypothetical protein VITISV_021238 [Vitis vinifera] 637 e-180
ref|XP_003517093.1| PREDICTED: rop guanine nucleotide exchange f... 626 e-177
>ref|XP_002326784.1| predicted protein [Populus trichocarpa] gi|222834106|gb|EEE72583.1|
predicted protein [Populus trichocarpa]
Length = 568
Score = 683 bits (1763), Expect = 0.0
Identities = 359/572 (62%), Positives = 431/572 (75%), Gaps = 5/572 (0%)
Frame = -2
Query: 1794 IIIMRKRLACCHPFANSNNISVDLDVEPEKIMTYNGLESCILNSCKYDDESSTSRTDGCV 1615
++I+R+RLACC IS+D D + E+IMTYNGLESCI+N+ Y++ES TSR +GCV
Sbjct: 1 MMILRRRLACC---TRDREISLDFDKQ-ERIMTYNGLESCIINNQSYENESGTSRGEGCV 56
Query: 1614 TD-FLXXXXXXXXXXXXXXXXXXSQCLVNK---HGLDEQEEISKSPQHMYLKEKQSISIQ 1447
+D F S+ L K HGL++ E+++SPQH Y KEK SIQ
Sbjct: 57 SDSFDDDGCSSCSSSKDAFGSFSSKWLTMKKDEHGLNDW-ELARSPQHFYDKEKPCYSIQ 115
Query: 1446 TFDVETMKEKFSKLLLGEDITGGRNGLTTALALSNAITNLAASVFGELWKLEPLSEERKS 1267
DVETMKEKF+KLLLGEDITGG++GL+TALALSNAITNLAA+VFGELWKLEPL EERK+
Sbjct: 116 YSDVETMKEKFAKLLLGEDITGGQSGLSTALALSNAITNLAATVFGELWKLEPLPEERKT 175
Query: 1266 RWQREMRWFLSPTNYMVELVPAKQNGTSGQTLEIMTPKLRSDIHVNLPALQKLDSMLIET 1087
+WQREM W LSPTNYMVELVPAKQN +G+ LEIMTPK R+DIHVNLPALQKLDSMLI+T
Sbjct: 176 KWQREMDWLLSPTNYMVELVPAKQNCANGRMLEIMTPKARADIHVNLPALQKLDSMLIDT 235
Query: 1086 LDSMVNTEFWYVERGSRAEGRTKTERPGKRWWLPSPQVPMAGLSTSGRKKLLYQGKVVDQ 907
LD+MVNTEFWY E GSRAEGRTK+ + KRWWLP PQVP GLS SGRKKLL Q KVV Q
Sbjct: 236 LDAMVNTEFWYSEVGSRAEGRTKSAKQSKRWWLPLPQVPTTGLSDSGRKKLLNQSKVVYQ 295
Query: 906 VFKAAKLINSGVLLEMPVPTIIRDALPKSGRANLGENLYKVLSTELNSPEEMLASLDLKN 727
VFKAAK +N VLLEMPVPTII+DALPKSG+ANLGE LYKVL+ + N+ EEML SLDLK+
Sbjct: 296 VFKAAKSVNETVLLEMPVPTIIKDALPKSGKANLGEELYKVLTADSNTAEEMLNSLDLKS 355
Query: 726 EHTVLQIMNKLETGVLAWKQKISEQVDGRSPLRNSWSLMKDSVSELDKAXXXXXXXXXXX 547
EH+ L+ +NKLE + AWK++++ QV GRSP+R SWS +KD VSE DK
Sbjct: 356 EHSALEAVNKLEAAIFAWKERVTAQVSGRSPVRTSWSFVKDPVSEFDKMESLLDSAESLL 415
Query: 546 XXLKIRFPNLPQTFLDVTKVQYNKDVGYSILEAYSRIVGSLAFSVLSRIKDILQEDELSN 367
LK R+PNLPQTFLD TKVQY KDVG++ILEAYSR++G++AFS+LSRI D++QED L+N
Sbjct: 416 QLLKSRYPNLPQTFLDSTKVQYGKDVGHAILEAYSRVLGNVAFSILSRIADVMQEDSLTN 475
Query: 366 PNSPAATCCYSSINLSGIFETPRAGTHLRHSL-IDQMNKVDGESDYSNPNNALDVNFTDC 190
P+SPAATCC+ IN SG ETP H+RHSL ID+MN VDG+ SN ++ D +
Sbjct: 476 PSSPAATCCFPGINSSGYVETPVHVLHVRHSLIIDEMNNVDGKYRESNASHISDQELSYS 535
Query: 189 EVKTCSLTSKPSRSRVWYIGKKACSGLPRTSS 94
E +T S + PSRSRVW IG AC L T+S
Sbjct: 536 EARTSSAIATPSRSRVWCIGGDACRSLSPTNS 567
>ref|XP_002273482.2| PREDICTED: rop guanine nucleotide exchange factor 1-like [Vitis
vinifera]
Length = 570
Score = 677 bits (1746), Expect = 0.0
Identities = 352/573 (61%), Positives = 427/573 (74%), Gaps = 7/573 (1%)
Frame = -2
Query: 1794 IIIMRKRLACCHPFANSNNISVDLDVEPEKIMTYNGLESCILNSCKYDDESSTSRTDGCV 1615
+++MR+RLACC +S+DLD E E+IMTYNGLE+CILN Y++ES TSR DGC
Sbjct: 2 MMVMRRRLACC---TRERELSLDLD-EQERIMTYNGLENCILNGHSYENESHTSRGDGCA 57
Query: 1614 TDFLXXXXXXXXXXXXXXXXXXSQCLV-----NKHGLDEQEEISKSPQHMYLKEKQSISI 1450
TD L S+ L ++HGLDE E + +SPQH Y+KEK S+
Sbjct: 58 TDSLDEDDTSCSSSKDAFGSFSSKWLTMNMKKDEHGLDEWE-VPESPQHFYVKEKPGYSV 116
Query: 1449 QTFDVETMKEKFSKLLLGEDITGGRNGLTTALALSNAITNLAASVFGELWKLEPLSEERK 1270
+ DVE MKE+FSKLLLGEDITGG+ GLT+ALALSNAITNLA SVFGELWKLEPLSEERK
Sbjct: 117 RFSDVEVMKERFSKLLLGEDITGGKKGLTSALALSNAITNLAVSVFGELWKLEPLSEERK 176
Query: 1269 SRWQREMRWFLSPTNYMVELVPAKQNGTSGQTLEIMTPKLRSDIHVNLPALQKLDSMLIE 1090
+WQREM W LSPTNYMVELVPAKQ+G +G+TLEIMTPK R+DIH+NLPALQKLDSMLIE
Sbjct: 177 VKWQREMDWLLSPTNYMVELVPAKQSGANGRTLEIMTPKARADIHMNLPALQKLDSMLIE 236
Query: 1089 TLDSMVNTEFWYVERGSRAEGRTKTERPGKRWWLPSPQVPMAGLSTSGRKKLLYQGKVVD 910
TLDSMV+TEFWY E GSRAEGRT++ KRWWLPSPQVP GLS RKKLL+Q KVV
Sbjct: 237 TLDSMVDTEFWYAEGGSRAEGRTRSMSQSKRWWLPSPQVPTTGLSDPERKKLLHQAKVVH 296
Query: 909 QVFKAAKLINSGVLLEMPVPTIIRDALPKSGRANLGENLYKVLSTELNSPEEMLASLDLK 730
QVFKAA+ IN VLLEMPVPT+IRDAL KSG+ANLGE LY+VL+ E +S EEML+SL+LK
Sbjct: 297 QVFKAARAINENVLLEMPVPTLIRDALAKSGKANLGEELYRVLTAESSSAEEMLSSLNLK 356
Query: 729 NEHTVLQIMNKLETGVLAWKQKISEQVDGRSPLRNSWSLMKDSVSELDKAXXXXXXXXXX 550
+EH+ L+ +N+LE V AWK++I+EQV G+SP+R SWS +KD +ELDK
Sbjct: 357 SEHSALEAINRLEAAVFAWKERITEQVSGKSPVRTSWSFIKDPTTELDKMELILFRAEAL 416
Query: 549 XXXLKIRFPNLPQTFLDVTKVQYNKDVGYSILEAYSRIVGSLAFSVLSRIKDILQEDELS 370
L+ R+PNLPQ+FLDV K+QY KD+G+SILEAYSR++G+LA S+L R++DILQED S
Sbjct: 417 LQQLRTRYPNLPQSFLDVAKIQYGKDIGHSILEAYSRVLGNLASSILCRMRDILQEDVFS 476
Query: 369 NPNSP-AATCCYSSINLSGIFETPRAGTHLRHSLIDQMNKVDGESDYSNPNNALDVNFTD 193
NPNSP A T C+ INL+G+ ETP +RHSLIDQMN VDG N + D +
Sbjct: 477 NPNSPIATTSCFPGINLTGMTETPTPSLRIRHSLIDQMNMVDGRFRDPNAGASPDCEASY 536
Query: 192 CEVKTCSLTSKPSRSRVWYIGKKACSGL-PRTS 97
+ + S+ + PSRSRVW IG++ACS L PR S
Sbjct: 537 SDSRRSSVMATPSRSRVWCIGREACSSLSPRNS 569
>emb|CBI29214.3| unnamed protein product [Vitis vinifera]
Length = 912
Score = 657 bits (1695), Expect = 0.0
Identities = 341/556 (61%), Positives = 414/556 (74%), Gaps = 6/556 (1%)
Frame = -2
Query: 1794 IIIMRKRLACCHPFANSNNISVDLDVEPEKIMTYNGLESCILNSCKYDDESSTSRTDGCV 1615
+++MR+RLACC +S+DLD E E+IMTYNGLE+CILN Y++ES TSR DGC
Sbjct: 1 MMVMRRRLACC---TRERELSLDLD-EQERIMTYNGLENCILNGHSYENESHTSRGDGCA 56
Query: 1614 TDFLXXXXXXXXXXXXXXXXXXSQCLV-----NKHGLDEQEEISKSPQHMYLKEKQSISI 1450
TD L S+ L ++HGLDE E + +SPQH Y+KEK S+
Sbjct: 57 TDSLDEDDTSCSSSKDAFGSFSSKWLTMNMKKDEHGLDEWE-VPESPQHFYVKEKPGYSV 115
Query: 1449 QTFDVETMKEKFSKLLLGEDITGGRNGLTTALALSNAITNLAASVFGELWKLEPLSEERK 1270
+ DVE MKE+FSKLLLGEDITGG+ GLT+ALALSNAITNLA SVFGELWKLEPLSEERK
Sbjct: 116 RFSDVEVMKERFSKLLLGEDITGGKKGLTSALALSNAITNLAVSVFGELWKLEPLSEERK 175
Query: 1269 SRWQREMRWFLSPTNYMVELVPAKQNGTSGQTLEIMTPKLRSDIHVNLPALQKLDSMLIE 1090
+WQREM W LSPTNYMVELVPAKQ+G +G+TLEIMTPK R+DIH+NLPALQKLDSMLIE
Sbjct: 176 VKWQREMDWLLSPTNYMVELVPAKQSGANGRTLEIMTPKARADIHMNLPALQKLDSMLIE 235
Query: 1089 TLDSMVNTEFWYVERGSRAEGRTKTERPGKRWWLPSPQVPMAGLSTSGRKKLLYQGKVVD 910
TLDSMV+TEFWY E GSRAEGRT++ KRWWLPSPQVP GLS RKKLL+Q KVV
Sbjct: 236 TLDSMVDTEFWYAEGGSRAEGRTRSMSQSKRWWLPSPQVPTTGLSDPERKKLLHQAKVVH 295
Query: 909 QVFKAAKLINSGVLLEMPVPTIIRDALPKSGRANLGENLYKVLSTELNSPEEMLASLDLK 730
QVFKAA+ IN VLLEMPVPT+IRDAL KSG+ANLGE LY+VL+ E +S EEML+SL+LK
Sbjct: 296 QVFKAARAINENVLLEMPVPTLIRDALAKSGKANLGEELYRVLTAESSSAEEMLSSLNLK 355
Query: 729 NEHTVLQIMNKLETGVLAWKQKISEQVDGRSPLRNSWSLMKDSVSELDKAXXXXXXXXXX 550
+EH+ L+ +N+LE V AWK++I+EQV G+SP+R SWS +KD +ELDK
Sbjct: 356 SEHSALEAINRLEAAVFAWKERITEQVSGKSPVRTSWSFIKDPTTELDKMELILFRAEAL 415
Query: 549 XXXLKIRFPNLPQTFLDVTKVQYNKDVGYSILEAYSRIVGSLAFSVLSRIKDILQEDELS 370
L+ R+PNLPQ+FLDV K+QY KD+G+SILEAYSR++G+LA S+L R++DILQED S
Sbjct: 416 LQQLRTRYPNLPQSFLDVAKIQYGKDIGHSILEAYSRVLGNLASSILCRMRDILQEDVFS 475
Query: 369 NPNSP-AATCCYSSINLSGIFETPRAGTHLRHSLIDQMNKVDGESDYSNPNNALDVNFTD 193
NPNSP A T C+ INL+G+ ETP +RHSLIDQMN VDG N + D +
Sbjct: 476 NPNSPIATTSCFPGINLTGMTETPTPSLRIRHSLIDQMNMVDGRFRDPNAGASPDCEASY 535
Query: 192 CEVKTCSLTSKPSRSR 145
+ + S+ + PSRSR
Sbjct: 536 SDSRRSSVMATPSRSR 551
>emb|CAN76404.1| hypothetical protein VITISV_021238 [Vitis vinifera]
Length = 1036
Score = 637 bits (1643), Expect = e-180
Identities = 343/592 (57%), Positives = 416/592 (70%), Gaps = 26/592 (4%)
Frame = -2
Query: 1794 IIIMRKRLACCHPFANSNNISVDLDVEPEKIMTYNGLESCILNSCKYDDESSTSRTDGCV 1615
+++ R+RLACC +S+DLD + E+IMTYNGLE+CILN Y++ES TSR DGC
Sbjct: 82 MMMRRRRLACC---TWERELSLDLD-DQERIMTYNGLENCILNGHSYENESHTSRGDGCA 137
Query: 1614 TDFLXXXXXXXXXXXXXXXXXXSQCLV-----NKHGLDEQEEISKSPQHMYLKEKQSISI 1450
TD L S+ L ++HGLDE E + +SPQH Y+KEK S
Sbjct: 138 TDSLDEDDSSCSSSKDAFGSFSSKWLTMNMKKDEHGLDEWE-VPESPQHFYVKEKPGYSF 196
Query: 1449 QTFDVETMKEKFSKLLLGEDITGGRNGLTTALALSNAITNLAASVFGELWKLEPLSEERK 1270
+ DVE MKE+FSKLLLGED TGG+ GLT+ALALSNAITNLA SVFGELWKLEPLSEERK
Sbjct: 197 RFSDVEVMKERFSKLLLGEDXTGGKKGLTSALALSNAITNLAVSVFGELWKLEPLSEERK 256
Query: 1269 SRWQREMRWFLSPTNYMVELVPAKQNGTSGQTLEIMTPKLRSDIHVNLPALQKLDSMLIE 1090
+WQREM W LSPT YMVELVPAKQ+G +G+TLEIMTPK R+DIH+NLPALQKLDSMLIE
Sbjct: 257 VKWQREMDWLLSPTXYMVELVPAKQSGANGRTLEIMTPKARADIHMNLPALQKLDSMLIE 316
Query: 1089 TLDSMVNTEFWYVERGSRAEGRTKTERPGKRWWLPSPQVPMAGLSTSGRKKLLYQGKVVD 910
TLDSMV+TEFWY E GSRAEGRT++ KRWWLPSPQVP GLS RKKLL+Q KVV
Sbjct: 317 TLDSMVDTEFWYAEGGSRAEGRTRSMSQSKRWWLPSPQVPTTGLSDPERKKLLHQAKVVH 376
Query: 909 QVFKAAKLINSGVLLEMPVPTIIRDALPK--------------------SGRANLGENLY 790
QVFKAA+ IN VLLEMPVPT+IRDAL K SG+ANLGE LY
Sbjct: 377 QVFKAARAINENVLLEMPVPTLIRDALAKASKLFDLFPSNQSSCLKTLESGKANLGEELY 436
Query: 789 KVLSTELNSPEEMLASLDLKNEHTVLQIMNKLETGVLAWKQKISEQVDGRSPLRNSWSLM 610
+VL+ E +S EEML+SL+LK+EH+ L+ +N+LE V AWK++I+EQV G+SP+R SWS +
Sbjct: 437 RVLTAESSSTEEMLSSLNLKSEHSALEAINRLEAAVFAWKERITEQVSGKSPVRTSWSFI 496
Query: 609 KDSVSELDKAXXXXXXXXXXXXXLKIRFPNLPQTFLDVTKVQYNKDVGYSILEAYSRIVG 430
KD +ELDK L+ R+PNLPQ+FLDV K+QY KD+G+SILEAYSR++G
Sbjct: 497 KDPTTELDKMELILFRAEALLQQLRTRYPNLPQSFLDVAKIQYGKDIGHSILEAYSRVLG 556
Query: 429 SLAFSVLSRIKDILQEDELSNPNSP-AATCCYSSINLSGIFETPRAGTHLRHSLIDQMNK 253
+LA S+L R++DILQED SNPNSP A T C+ INL+G+ ETP +RHSLIDQMN
Sbjct: 557 NLASSILCRMRDILQEDVFSNPNSPIATTSCFPGINLTGMTETPTPSLRIRHSLIDQMNM 616
Query: 252 VDGESDYSNPNNALDVNFTDCEVKTCSLTSKPSRSRVWYIGKKACSGLPRTS 97
VDG N + D + + + S+ + PSRSR G GLPR S
Sbjct: 617 VDGRFRDPNAGASPDCEASYSDSRRSSVMATPSRSR----GLNYIMGLPRFS 664
>ref|XP_003517093.1| PREDICTED: rop guanine nucleotide exchange factor 1-like [Glycine
max]
Length = 563
Score = 626 bits (1615), Expect = e-177
Identities = 332/572 (58%), Positives = 418/572 (73%), Gaps = 5/572 (0%)
Frame = -2
Query: 1794 IIIMRKRLACCHPFANSNNISVDLDVEPEKIMTYNGLESCILNSCKYDDESSTSRTDGCV 1615
+++MRKRLACC S+D D E E+IMTYNGLESC+LN+ Y+DES TSR D C+
Sbjct: 1 MLMMRKRLACC---TRERKFSIDHD-EQERIMTYNGLESCMLNNQSYEDESRTSRGDECI 56
Query: 1614 TDFLXXXXXXXXXXXXXXXXXXSQCLVNKH---GLDEQEEISKSPQHMYLKEKQSISIQT 1444
TD S+CL K GL+E E +S+SPQH +KEK +IQ
Sbjct: 57 TDSFDDDNSSSSSSKDAFGSFSSKCLTMKRDDKGLEEWE-LSESPQHFCVKEKP-YAIQH 114
Query: 1443 FDVETMKEKFSKLLLGEDITGGRNGLTTALALSNAITNLAASVFGELWKLEPLSEERKSR 1264
D+E MK+KFSKLLLGED+TGG GL+TALALSNAITNLA +VFGELWKLEPLSEERK +
Sbjct: 115 SDIEAMKDKFSKLLLGEDVTGGTKGLSTALALSNAITNLAVTVFGELWKLEPLSEERKRK 174
Query: 1263 WQREMRWFLSPTNYMVELVPAKQNGTSGQTLEIMTPKLRSDIHVNLPALQKLDSMLIETL 1084
WQREM W LSPTNYMVELVPAKQ+ ++G EIMTPK R+DIH+NLPALQKLDSMLIETL
Sbjct: 175 WQREMDWLLSPTNYMVELVPAKQSSSNGGIFEIMTPKARADIHMNLPALQKLDSMLIETL 234
Query: 1083 DSMVNTEFWYVERGSRAEGRTKT-ERPGKRWWLPSPQVPMAGLSTSGRKKLLYQGKVVDQ 907
D M+NTEFWY E GS+AEGR T + KRWWLPSPQVP GLS + RK+LL+QG+VV Q
Sbjct: 235 DLMMNTEFWYAEGGSQAEGRRDTNSQHSKRWWLPSPQVPKTGLSDTERKRLLHQGRVVRQ 294
Query: 906 VFKAAKLINSGVLLEMPVPTIIRDALPKSGRANLGENLYKVLSTELNSPEEMLASLDLKN 727
VFKAAK IN VLLEMPVP+II+DAL KSG+ANLG+ L+KVL E +S E+ML L+LK+
Sbjct: 295 VFKAAKAINESVLLEMPVPSIIKDALAKSGKANLGQELHKVLMAESSSGEDMLKYLNLKS 354
Query: 726 EHTVLQIMNKLETGVLAWKQKISEQVDGRSPLRNSWS-LMKDSVSELDKAXXXXXXXXXX 550
EH VL+ +N+LE + +WK++I+EQV G+SP+R+SWS +KD +SE+DK
Sbjct: 355 EHLVLETVNRLEAAIFSWKERIAEQVSGKSPVRSSWSPFVKDPMSEVDKLELLLDRAETL 414
Query: 549 XXXLKIRFPNLPQTFLDVTKVQYNKDVGYSILEAYSRIVGSLAFSVLSRIKDILQEDELS 370
+KIR+PNLPQTFLD TKVQY KD+G+SILEAYSR++G+LAFS++SRI D+LQED LS
Sbjct: 415 LQLIKIRYPNLPQTFLDATKVQYGKDIGHSILEAYSRVLGNLAFSIVSRIGDVLQEDSLS 474
Query: 369 NPNSPAATCCYSSINLSGIFETPRAGTHLRHSLIDQMNKVDGESDYSNPNNALDVNFTDC 190
NPNSP + C INLS +T G+H+R SL+D++NK DG+ S+ + D+ +
Sbjct: 475 NPNSPVSINCSPEINLS---QTWVVGSHIRQSLLDKINKADGQYCDSSCYTS-DLELSSI 530
Query: 189 EVKTCSLTSKPSRSRVWYIGKKACSGLPRTSS 94
+ K+ S+ P+RS VW I ++AC + +S
Sbjct: 531 DTKSSSVIVTPNRSTVWCISREACKSVSPQNS 562