BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009605
         (1481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   692   0.0  
ref|XP_002329325.1| predicted protein [Populus trichocarpa] gi|2...   675   0.0  
ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinu...   670   0.0  
ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ...   661   0.0  
ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ...   660   0.0  

>ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
            gi|296087299|emb|CBI33673.3| unnamed protein product
            [Vitis vinifera]
          Length = 395

 Score =  692 bits (1785), Expect = 0.0
 Identities = 329/393 (83%), Positives = 350/393 (89%), Gaps = 1/393 (0%)
 Frame = -2

Query: 1306 MANLNPIILAWGSGEDGQLGIGDNEDKEWVCSIKALESQKISAVVGGSRNSLAICEDGKL 1127
            MA+    I++WGSGEDGQLGIG+NE+KEWVC++KAL +Q + +VV GSRNSLAICEDGKL
Sbjct: 1    MASKPKAIISWGSGEDGQLGIGNNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKL 60

Query: 1126 FTWGWNQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDKGQAYAWGGNE 947
            FTWGWNQRGTLGHPPETKTENIPSQVKALAN KIVQAAIGGWHCLAVDD+G+AYAWGGNE
Sbjct: 61   FTWGWNQRGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNE 120

Query: 946  YGQCGEEPERKXXXXXXXXXDIVIPQRCAPKLSVRQVAAGGTHSVVLTNEGHLWTWGQPW 767
            YGQCGEEPERK         DI IPQRCA KLSVRQVAAGGTHSVVLT EGH+WTWGQPW
Sbjct: 121  YGQCGEEPERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTHSVVLTREGHVWTWGQPW 180

Query: 766  PPGDIKQISTPVRVQGLEKVKLIAVGAFHNLALLEDGMLWAWGNNEYGQLGTGDTQPRSQ 587
            PPGDIKQISTPVRVQGLEKV+LIAVGAFHNLALLEDG+LWAWGNNEYGQLGTGDTQPRSQ
Sbjct: 181  PPGDIKQISTPVRVQGLEKVRLIAVGAFHNLALLEDGILWAWGNNEYGQLGTGDTQPRSQ 240

Query: 586  PIPVQGLSGLALVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGDDKSSKMVPQRVQLL 407
            PI VQGLS L LVDIAAGGWHSTALTD+G VYGWGRGEHGRLGFGDDKSSKMVPQ+VQLL
Sbjct: 241  PIAVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWGRGEHGRLGFGDDKSSKMVPQKVQLL 300

Query: 406  VGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKGTTGHPTEVLINIPQPRNLS 227
            V E+IVQ+SCGGTHSVALTRDGRMFSFGRGDHGRLGYGRK TTGHP EV IN+P   NLS
Sbjct: 301  VEENIVQISCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGHPMEVPINLPPATNLS 360

Query: 226  NIGT-GQWCAKLVACGGRHTLAIATWQTEELEQ 131
              G  G WC+KLVACGGRHTLAI  W   E EQ
Sbjct: 361  GSGAGGHWCSKLVACGGRHTLAIVEWLAHEPEQ 393


>ref|XP_002329325.1| predicted protein [Populus trichocarpa] gi|222870779|gb|EEF07910.1|
            predicted protein [Populus trichocarpa]
          Length = 392

 Score =  675 bits (1742), Expect = 0.0
 Identities = 322/382 (84%), Positives = 344/382 (90%), Gaps = 2/382 (0%)
 Frame = -2

Query: 1285 ILAWGSGEDGQLGIGDNEDKEWVCSIKALESQKISAVVGGSRNSLAICEDGKLFTWGWNQ 1106
            ++AWGSGEDGQLGIG+NE+KEWVC +KALE  K+ +VV GSRNSLAIC+DGKLFTWGWNQ
Sbjct: 7    VIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQ 66

Query: 1105 RGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDKGQAYAWGGNEYGQCGEE 926
            RGTLGHPPETKTENIPSQVKALANV IVQAAIGGWHCLAVDD+G+AYAWGGNEYGQCGEE
Sbjct: 67   RGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 126

Query: 925  PERKXXXXXXXXXDIVIPQRCAPKLSVRQVAAGGTHSVVLTNEGHLWTWGQPWPPGDIKQ 746
            PERK         DIVIPQRCA KL VRQVAAGGTHSVVLT EGH+W+WGQPWPPGDIKQ
Sbjct: 127  PERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTREGHVWSWGQPWPPGDIKQ 186

Query: 745  ISTPVRVQGLEKVKLIAVGAFHNLALLEDGMLWAWGNNEYGQLGTGDTQPRSQPIPVQGL 566
            IS PVRVQGLE+V+LIAVGAFHNLAL EDG LWAWGNNEYGQLGTGDTQPRSQPI VQGL
Sbjct: 187  ISVPVRVQGLERVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPITVQGL 246

Query: 565  SGLALVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGD-DKSSKMVPQRVQLLVGEDIV 389
            SGL LVDIAAGGWHSTALTD+GEVYGWGRGEHGRLGFGD DKSSKMVPQRV LLVGEDIV
Sbjct: 247  SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIV 306

Query: 388  QVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKGTTGHPTEVLINIPQPRNLSNIG-TG 212
            QVSCGGTHSVALTRDGRM++FGRGDHGRLGYGRK TTG P EV I+IP P+NL++ G  G
Sbjct: 307  QVSCGGTHSVALTRDGRMYTFGRGDHGRLGYGRKVTTGQPMEVPIDIPPPKNLTDSGDAG 366

Query: 211  QWCAKLVACGGRHTLAIATWQT 146
            +W AKLVA GGRHTLAI  W T
Sbjct: 367  RWIAKLVASGGRHTLAIVEWHT 388



 Score = 57.4 bits (137), Expect = 1e-05
 Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
 Frame = -2

Query: 514 LTDEGEVYGWGRGEHGRLGFGDDKSSKMVPQRVQLLVGEDIVQVSCGGTHSVALTRDGRM 335
           +  E  V  WG GE G+LG G+++  + V   V+ L    +  V  G  +S+A+  DG++
Sbjct: 1   MATESSVIAWGSGEDGQLGIGNNEEKEWV-CIVKALEPYKVRSVVAGSRNSLAICDDGKL 59

Query: 334 FSFGRGDHGRLGYGRKGTTGHPTEVLI-NIP-QPRNLSNIGTGQWCAKLVACGGRHTLAI 161
           F++        G+ ++GT GHP E    NIP Q + L+N+   Q      A GG H LA+
Sbjct: 60  FTW--------GWNQRGTLGHPPETKTENIPSQVKALANVNIVQ-----AAIGGWHCLAV 106


>ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
            gi|223544118|gb|EEF45643.1| Ran GTPase binding protein,
            putative [Ricinus communis]
          Length = 393

 Score =  670 bits (1728), Expect = 0.0
 Identities = 319/385 (82%), Positives = 340/385 (88%), Gaps = 3/385 (0%)
 Frame = -2

Query: 1285 ILAWGSGEDGQLGIGDNEDKEWVCSIKALESQKISAVVGGSRNSLAICEDGKLFTWGWNQ 1106
            ++AWG+GEDGQLGIG NE+KEWVC + ALE  K+ +VV GSRNSLAIC+DGKLFTWGWNQ
Sbjct: 7    LIAWGAGEDGQLGIGINEEKEWVCVVNALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQ 66

Query: 1105 RGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDKGQAYAWGGNEYGQCGEE 926
            RGTLGHP ETKTENIPSQVKAL NV IVQAAIGGWHCLAVDD+G+AYAWGGNEYGQCGEE
Sbjct: 67   RGTLGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 126

Query: 925  PERKXXXXXXXXXDIVIPQRCAPKLSVRQVAAGGTHSVVLTNEGHLWTWGQPWPPGDIKQ 746
            PERK         DIVIPQRCAPKL VRQVAAGGTHSVVLT EGH+WTWGQPWPPGDIKQ
Sbjct: 127  PERKDDTGKTLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQ 186

Query: 745  ISTPVRVQGLEKVKLIAVGAFHNLALLEDGMLWAWGNNEYGQLGTGDTQPRSQPIPVQGL 566
            IS PVRVQGLEKVKLIAVGAFHNLAL EDG LWAWGNNEYGQLGTGDTQPRSQPIPVQGL
Sbjct: 187  ISVPVRVQGLEKVKLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGL 246

Query: 565  SGLALVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGD-DKSSKMVPQRVQLLVGEDIV 389
            SGL LVDIAAGGWHSTALTD+GEVYGWGRGEHGRLGFGD DKSSKMVPQ+V LL GEDIV
Sbjct: 247  SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIV 306

Query: 388  QVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKGTTGHPTEVLINIPQPRNLSNI--GT 215
            Q+SCGGTHSVALT+DGRMFSFGRGDHGRLGYG+K TTG P EV  +IP P++LS      
Sbjct: 307  QLSCGGTHSVALTQDGRMFSFGRGDHGRLGYGKKVTTGQPVEVPTDIPPPKSLSGTEEAE 366

Query: 214  GQWCAKLVACGGRHTLAIATWQTEE 140
            G W AKLVACGGRHTLAI  W+ +E
Sbjct: 367  GHWIAKLVACGGRHTLAIVEWKVDE 391


>ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Cucumis sativus]
          Length = 390

 Score =  661 bits (1706), Expect = 0.0
 Identities = 313/383 (81%), Positives = 340/383 (88%), Gaps = 1/383 (0%)
 Frame = -2

Query: 1285 ILAWGSGEDGQLGIGDNEDKEWVCSIKALESQKISAVVGGSRNSLAICEDGKLFTWGWNQ 1106
            I+AWGSGEDGQLG+G+NE++EWVC+IKALESQ + +VV GSRNSLAI EDGKLFTWGWNQ
Sbjct: 7    IIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQ 66

Query: 1105 RGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDKGQAYAWGGNEYGQCGEE 926
            RGTLGHP  TK+EN+PSQVKAL+NVKIVQAAIGGWHCLAVDD+G+AYAWGGNEYGQCGEE
Sbjct: 67   RGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 126

Query: 925  PERKXXXXXXXXXDIVIPQRCAPKLSVRQVAAGGTHSVVLTNEGHLWTWGQPWPPGDIKQ 746
            PE+K         DI IPQRCAPKL VRQVAAGGTHSVVLT EGH+WTWGQPWPPGDI Q
Sbjct: 127  PEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDITQ 186

Query: 745  ISTPVRVQGLEKVKLIAVGAFHNLALLEDGMLWAWGNNEYGQLGTGDTQPRSQPIPVQGL 566
            IS PVRVQGL+ V+LIAVGAFHNLAL EDG LWAWGNNEYGQLGTGDTQPRSQPIPVQGL
Sbjct: 187  ISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGL 246

Query: 565  SGLALVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGD-DKSSKMVPQRVQLLVGEDIV 389
            SGL LVDIAAGGWHSTALTD GEVYGWGRGEHGRLGFGD DKSSKMVPQ+VQLL GE+IV
Sbjct: 247  SGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIV 306

Query: 388  QVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKGTTGHPTEVLINIPQPRNLSNIGTGQ 209
            Q+SCGGTHSVA+T DGRMFSFGRGDHGRLGYGRK TTG P EV I+IP PR  +    G 
Sbjct: 307  QISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRTE--NGH 364

Query: 208  WCAKLVACGGRHTLAIATWQTEE 140
            W AKLVACGGRHTLA+  W++E+
Sbjct: 365  WIAKLVACGGRHTLALVQWKSED 387


>ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Cucumis sativus]
          Length = 390

 Score =  660 bits (1704), Expect = 0.0
 Identities = 313/383 (81%), Positives = 339/383 (88%), Gaps = 1/383 (0%)
 Frame = -2

Query: 1285 ILAWGSGEDGQLGIGDNEDKEWVCSIKALESQKISAVVGGSRNSLAICEDGKLFTWGWNQ 1106
            I+AWGSGEDGQLG+G+NE++EWVC+IKALESQ + +VV GSRNSLAI EDGKLFTWGWNQ
Sbjct: 7    IIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQ 66

Query: 1105 RGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDKGQAYAWGGNEYGQCGEE 926
            RGTLGHP  TK+EN+PSQVKAL+NVKIVQAAIGGWHCLAVDD+G+AYAWGGNEYGQCGEE
Sbjct: 67   RGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 126

Query: 925  PERKXXXXXXXXXDIVIPQRCAPKLSVRQVAAGGTHSVVLTNEGHLWTWGQPWPPGDIKQ 746
            PE+K         DI IPQRCAPKL VRQVAAGGTHSVVLT EGH+WTWGQPWPPGDI Q
Sbjct: 127  PEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDITQ 186

Query: 745  ISTPVRVQGLEKVKLIAVGAFHNLALLEDGMLWAWGNNEYGQLGTGDTQPRSQPIPVQGL 566
            IS PVRVQGL+ V+LIAVGAFHNLAL EDG LWAWGNNEYGQLGTGDTQPRSQPIPVQGL
Sbjct: 187  ISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGL 246

Query: 565  SGLALVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGD-DKSSKMVPQRVQLLVGEDIV 389
            SGL LVDIAAGGWHSTALTD GEVYGWGRGEHGRLGFGD DKSSKMVPQ+VQLL GE+IV
Sbjct: 247  SGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIV 306

Query: 388  QVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKGTTGHPTEVLINIPQPRNLSNIGTGQ 209
            Q+SCGGTHSVA+T DGRMFSFGRGDHGRLGYGRK TTG P EV I+IP PR  +    G 
Sbjct: 307  QISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRTE--NGH 364

Query: 208  WCAKLVACGGRHTLAIATWQTEE 140
            W AKLVACGGRHTLA+  W+ E+
Sbjct: 365  WIAKLVACGGRHTLALVQWKPED 387