BLASTX nr result

ID: Coptis25_contig00009603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009603
         (1000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22103.3| unnamed protein product [Vitis vinifera]              204   3e-50
ref|XP_002300875.1| predicted protein [Populus trichocarpa] gi|2...   183   6e-44
gb|ABK96557.1| unknown [Populus trichocarpa x Populus deltoides]      179   7e-43
dbj|BAK02178.1| predicted protein [Hordeum vulgare subsp. vulgare]    132   1e-28
emb|CAN71458.1| hypothetical protein VITISV_007604 [Vitis vinifera]   128   2e-27

>emb|CBI22103.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  204 bits (519), Expect = 3e-50
 Identities = 113/278 (40%), Positives = 164/278 (58%), Gaps = 30/278 (10%)
 Frame = -3

Query: 938 NESLTFDQMSKCFNMPIADAAANLGVCSSLLKKLCRDNGLVRWPYRKFLAGKTIEEIQKD 759
           ++SL+FD +S CF++PI++AA  LGVC+S+LKK+CR+NGL RWPYRKF +G ++EEI+K 
Sbjct: 10  DKSLSFDDVSNCFSLPISEAANALGVCTSVLKKICRENGLQRWPYRKFQSGTSVEEIKKY 69

Query: 758 AAREKKREMIELARAARQKDXXXXXXXXXXT--------------------------IFQ 657
           AARE+ +E+ +L++   Q +                                     + Q
Sbjct: 70  AARERNKELAQLSKVDVQGNDALTSSAVSAAFGSQPQNDTKSSLWKMSKLHGAIPPHMLQ 129

Query: 656 HQGNSVSQDGLTNDTPHASLLRNIAC-LDEFKQGFPTTGLATVTMRWWGGRGSDGNEDEI 480
            QG+   Q+G   + P+ASL + IA  LDEFK GFPT+GLAT + +WWG    DG E  I
Sbjct: 130 QQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASNKWWGSSSPDGYEGTI 189

Query: 479 FGEEPAVDEVSKQQPHDLADNDVEFLE---EETDPLAKKIDMGPQGAALLSSVRKAATAE 309
            G    +DE  K+Q   LADN    L    E+ +   ++  +GPQG  LL++VRK    E
Sbjct: 190 -GNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQGTGLLTAVRKTTVEE 248

Query: 308 GREALKLGVFGDHGLFKPDRQEKLMLLKVFKSSMSCQW 195
           GR+ LK+GV  DHG+ K  ++E+ +LL++F SS+  QW
Sbjct: 249 GRKILKIGVGRDHGVLKAGKKERRLLLQIFGSSLPSQW 286


>ref|XP_002300875.1| predicted protein [Populus trichocarpa] gi|222842601|gb|EEE80148.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score =  183 bits (464), Expect = 6e-44
 Identities = 108/255 (42%), Positives = 154/255 (60%), Gaps = 6/255 (2%)
 Frame = -3

Query: 941 PNESL--TFDQMSKCFNMPIADAAANLGVCSSLLKKLCRDNGLVRWPYRKFLAGKTIEEI 768
           PN+S   +++ +SK F++P++DAA NLGVC S+LKK+CRDNGL RWPYRK+LAGK+IE+I
Sbjct: 9   PNQSKPPSWEAISKHFSLPLSDAANNLGVCVSVLKKICRDNGLDRWPYRKYLAGKSIEDI 68

Query: 767 QKDAAREKKREMIELARAARQKD-XXXXXXXXXXTIFQHQGNSVSQDGLTNDTPHASLLR 591
           ++ AAREK + + +LA+AA +                Q QG      G  + T    L +
Sbjct: 69  RRYAAREKIKAIADLAKAANKSGIQQQNNENSKPHKLQQQGTKDVLVGRQHITLTPGLAK 128

Query: 590 NIACLDEFKQGFPTTGLATVTMRWWGGRGSDGNE-DEIFGEEPAVDEVSKQQPHDLADND 414
            +  LDEFK GFP+ GL+T T +WWG   SD     +  G E   D+  + +    A   
Sbjct: 129 GLMGLDEFKYGFPSDGLSTATNKWWGSSLSDTQRATDRAGIETDEDDGRQSEEKVDAGTS 188

Query: 413 VEFLEEETDPLAK--KIDMGPQGAALLSSVRKAATAEGREALKLGVFGDHGLFKPDRQEK 240
           V  ++EE     K    ++ PQG  LL+SVRK A  EGREALKLGV+  +G+ K  R+++
Sbjct: 189 VVIVDEEKGENGKMESNEIDPQGTGLLTSVRKRAAEEGREALKLGVYRTYGVNKLGRKQR 248

Query: 239 LMLLKVFKSSMSCQW 195
            +LL++F SS+  QW
Sbjct: 249 ALLLRIFGSSLPKQW 263


>gb|ABK96557.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 274

 Score =  179 bits (455), Expect = 7e-43
 Identities = 109/264 (41%), Positives = 156/264 (59%), Gaps = 6/264 (2%)
 Frame = -3

Query: 941 PNESL--TFDQMSKCFNMPIADAAANLGVCSSLLKKLCRDNGLVRWPYRKFLAGKTIEEI 768
           PN+S   +++ +SK F++P++DAA NLGVC S+LKK+CR+NGL RWPYRK+LAGK+IE+I
Sbjct: 9   PNQSKPPSWEAISKHFSLPLSDAANNLGVCVSVLKKICRENGLDRWPYRKYLAGKSIEDI 68

Query: 767 QKDAAREKKREMIELARAARQKD-XXXXXXXXXXTIFQHQGNSVSQDGLTNDTPHASLLR 591
           ++ AAREK + + +LA+AA +                Q QG      G  +      L +
Sbjct: 69  RRYAAREKIKAIADLAKAANKSGIQQQNNENSKPHKLQQQGTKDVLVGRQHIMLTPGLAK 128

Query: 590 NIACLDEFKQGFPTTGLATVTMRWWGGRGSDGNE-DEIFGEEPAVDEVSKQQPHDLADND 414
            +  LDEFK GFP+ GL+T T +WWG   SD     +  G E   D+  + +    A   
Sbjct: 129 GLMGLDEFKYGFPSDGLSTATNKWWGSSLSDTQRATDRAGIETDEDDGHQSEEKVDAGTS 188

Query: 413 VEFLEEETDPLAK--KIDMGPQGAALLSSVRKAATAEGREALKLGVFGDHGLFKPDRQEK 240
           V  ++EE     K    ++ PQG  LL+SVRK A  EGREALKLGV+  +G+ K  R+++
Sbjct: 189 VVIVDEEKGENGKMESNEIDPQGTGLLTSVRKRAVEEGREALKLGVYRTYGVNKLGRKQR 248

Query: 239 LMLLKVFKSSMSCQWKFDSF*TRV 168
            +LL++F SS+  QW  D    RV
Sbjct: 249 ALLLRIFGSSLPKQWIQDFSSNRV 272


>dbj|BAK02178.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score =  132 bits (333), Expect = 1e-28
 Identities = 81/268 (30%), Positives = 153/268 (57%), Gaps = 17/268 (6%)
 Frame = -3

Query: 944 PPNESLTFDQMSKCFNMPIADAAANLGVCSSLLKKLCRDNGLVRWPYRKFLAGKTIEEIQ 765
           P   SL+++++SK F++PIA+AA+ LGVC+S+LK++CR +G+VRWPYRK ++GK   +  
Sbjct: 81  PTRVSLSYEEISKLFSLPIAEAASILGVCTSVLKRICRTHGIVRWPYRKIVSGK--GDDV 138

Query: 764 KDAAREKKREMIELARAARQKD-XXXXXXXXXXTIFQ----------HQGNSVSQDGLTN 618
           K+A REK  +++EL++ A+QK              FQ            G+++ +  + +
Sbjct: 139 KNAEREKAMQLLELSKIAKQKAISSSGSLTTSSGAFQAVSKAQQGSAKAGSAIGRQNVPS 198

Query: 617 DTPHASLLRNIACLDEFKQGFPTTGLATVTMRWWGGRGSDGNEDEIFGEEPAVD--EVSK 444
            +  +        +D+FK GFP++GL+T TM+WW    +D + + +  ++   +  E + 
Sbjct: 199 LSQFSQAKDIPTYMDDFKYGFPSSGLSTETMKWW---ATDSHTETVAVKDDNREGSESTN 255

Query: 443 QQPHDLADNDVEFLEEETDPLAKKIDMGPQGAALLSSVRKAATAEGREALKLGVFGDHG- 267
           +    + D+++++  +E +  A  +D     +A L S+R+ A  +GR  L     GD G 
Sbjct: 256 EASKGMTDDELDWGADEPEADADGMDAATDPSAQLCSLRRKAAGDGRRLLN----GDTGR 311

Query: 266 ---LFKPDRQEKLMLLKVFKSSMSCQWK 192
              L + ++++K++L +VF +S+  QW+
Sbjct: 312 VQQLCRLNKRQKIVLAQVFGASLPEQWR 339


>emb|CAN71458.1| hypothetical protein VITISV_007604 [Vitis vinifera]
          Length = 302

 Score =  128 bits (321), Expect = 2e-27
 Identities = 70/161 (43%), Positives = 98/161 (60%), Gaps = 4/161 (2%)
 Frame = -3

Query: 665 IFQHQGNSVSQDGLTNDTPHASLLRNIAC-LDEFKQGFPTTGLATVTMRWWGGRGSDGNE 489
           + Q QG+   Q+G   + P+ASL + IA  LDEFK GFPT+GLAT + +WWG    DG E
Sbjct: 138 MLQQQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASNKWWGSSSPDGYE 197

Query: 488 DEIFGEEPAVDEVSKQQPHDLADNDVEFLE---EETDPLAKKIDMGPQGAALLSSVRKAA 318
             I G    +DE  K+Q   LADN    L    E+ +   ++  +GPQG  LL++VRK  
Sbjct: 198 GTI-GNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQGTGLLTAVRKTT 256

Query: 317 TAEGREALKLGVFGDHGLFKPDRQEKLMLLKVFKSSMSCQW 195
             EGR+ LK+GV  DHG+ K  ++E+ +LL++F SS+  QW
Sbjct: 257 VEEGRKILKIGVGRDHGVLKAGKKERRLLLQIFGSSLPSQW 297


Top