BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009601
         (1483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276763.1| PREDICTED: uncharacterized protein LOC100264...   275   2e-71
gb|AEG66932.1| plastid transcriptionally active [Gossypium hirsu...   257   5e-66
gb|AAF14021.1|AC011436_5 unknown protein [Arabidopsis thaliana]       249   2e-63
ref|NP_566346.1| plastid transcriptionally active 13 [Arabidopsi...   249   2e-63
gb|AAM65289.1| unknown [Arabidopsis thaliana]                         245   2e-62

>ref|XP_002276763.1| PREDICTED: uncharacterized protein LOC100264906 [Vitis vinifera]
            gi|297740266|emb|CBI30448.3| unnamed protein product
            [Vitis vinifera]
          Length = 339

 Score =  275 bits (703), Expect = 2e-71
 Identities = 152/287 (52%), Positives = 183/287 (63%), Gaps = 4/287 (1%)
 Frame = -1

Query: 1183 NWXXXXXXXXXXKPTKRFANWKDELNLDNLADLGTQWWCVRVSRVNGHETADRLARFLAR 1004
            NW          KP KR+A+W +ELNLDNLA LG QWW VRVSRV+G E+A+RLAR LAR
Sbjct: 65   NWREEVEERLLKKPKKRYASWTEELNLDNLALLGPQWWVVRVSRVSGQESAERLARSLAR 124

Query: 1003 NHPIVEFKVYAPAVHVKRKLKNGTISVKPKPVFPGCIFLSCVLNKELHDIIRECDGIGGF 824
            N P ++FKVY P+V VKRKLKNG+ISVKPKP+FPGC+FL CVLNKE HD IRECDGIGGF
Sbjct: 125  NFPDIDFKVYVPSVQVKRKLKNGSISVKPKPLFPGCVFLRCVLNKETHDFIRECDGIGGF 184

Query: 823  IGSKVGNTXXXXXXXXXXXXXXXXXXXXXXXXXDIEAIFHQAKEEQEKADQAFDEEQRSE 644
            +GSKVGNT                         DIEAIF Q+KEEQEKAD+AF+EEQ+ E
Sbjct: 185  VGSKVGNT------------KRQINKPRPVSVDDIEAIFKQSKEEQEKADKAFEEEQQKE 232

Query: 643  GILKNEEI----NSDAIETVVNAVGNXXXXXXXXXXXXXXXXXXXTGADDKLLXXXXXXX 476
              +  E++    + D+ +  ++ V +                   T   DKLL       
Sbjct: 233  ETINPEKLIIYPHLDSKDVTISVV-DSKPKRRSRKASKPIADGASTAKHDKLLKPGSTVR 291

Query: 475  XXXXXXSEFKGSLKKLDPASGKATVGFTLFGKESFVDLDMNQIVAET 335
                  +EF GSLKKLD  +GKATVGFTLFGKE+ VDLD+N+IVAET
Sbjct: 292  VVSGTFTEFSGSLKKLDRKNGKATVGFTLFGKETLVDLDVNEIVAET 338


>gb|AEG66932.1| plastid transcriptionally active [Gossypium hirsutum]
          Length = 345

 Score =  257 bits (657), Expect = 5e-66
 Identities = 142/285 (49%), Positives = 172/285 (60%), Gaps = 1/285 (0%)
 Frame = -1

Query: 1186 YNWXXXXXXXXXXKPTKRFANWKDELNLDNLADLGTQWWCVRVSRVNGHETADRLARFLA 1007
            Y+W          KP KR+ +W +ELNLDNLA LG QWW VRVSR+ G ETA+  AR LA
Sbjct: 73   YSWREEVEERLIKKPKKRYTSWTEELNLDNLAHLGPQWWVVRVSRLRGLETAEVTARVLA 132

Query: 1006 RNHPIVEFKVYAPAVHVKRKLKNGTISVKPKPVFPGCIFLSCVLNKELHDIIRECDGIGG 827
            RN P +EFK+Y PAV  K++LKNG+ISVKPKP+FPGC+FL CVLNKE+HD IRECDG+GG
Sbjct: 133  RNFPNIEFKIYTPAVQEKKRLKNGSISVKPKPLFPGCVFLRCVLNKEIHDFIRECDGVGG 192

Query: 826  FIGSKVGNTXXXXXXXXXXXXXXXXXXXXXXXXXDIEAIFHQAKEEQEKADQAFDEEQRS 647
            F+GSKVGNT                         D+EAIF QAK EQEKADQAF EEQ+ 
Sbjct: 193  FVGSKVGNTKRQINKPRPVSVD------------DMEAIFRQAKVEQEKADQAFQEEQQG 240

Query: 646  EGILKNEEINSDAIETVVNAVGNXXXXXXXXXXXXXXXXXXXTGAD-DKLLXXXXXXXXX 470
            E  L ++++N +      N V +                    GA   K L         
Sbjct: 241  ENALMSDKMNIE-YNVDSNGVTSSVLDTKPKRQTKKKSDTVVNGAKYSKQLVPGSKVRVL 299

Query: 469  XXXXSEFKGSLKKLDPASGKATVGFTLFGKESFVDLDMNQIVAET 335
                +EF GSLKKL+  +GKATVGFTLFGKE+ VDLD+  +V ET
Sbjct: 300  SGNFAEFIGSLKKLNRKTGKATVGFTLFGKETLVDLDVKDVVLET 344


>gb|AAF14021.1|AC011436_5 unknown protein [Arabidopsis thaliana]
          Length = 332

 Score =  249 bits (635), Expect = 2e-63
 Identities = 142/290 (48%), Positives = 172/290 (59%), Gaps = 7/290 (2%)
 Frame = -1

Query: 1186 YNWXXXXXXXXXXKPTKRFANWKDELNLDNLADLGTQWWCVRVSRVNGHETADRLARFLA 1007
            Y+W          KP KR+A W +ELNLD LA+ G QWW VRVSR+ GHETA  LAR LA
Sbjct: 60   YSWREEVEEKLIKKPKKRYATWTEELNLDTLAESGPQWWAVRVSRLRGHETAQILARALA 119

Query: 1006 RNHPIVEFKVYAPAVHVKRKLKNGTISVKPKPVFPGCIFLSCVLNKELHDIIRECDGIGG 827
            R  P +EF VYAP+V VKRKLKNG+ISVKPKPVFPGCIF+ C+LNKE+HD IR+ DG+GG
Sbjct: 120  RQFPEMEFTVYAPSVQVKRKLKNGSISVKPKPVFPGCIFIRCILNKEIHDSIRDVDGVGG 179

Query: 826  FIGSKVGNTXXXXXXXXXXXXXXXXXXXXXXXXXDIEAIFHQAKEEQEKADQAFDEEQRS 647
            FIGSKVGNT                         D+EAIF QAKE QEKAD  F+E  R+
Sbjct: 180  FIGSKVGNTKRQINKPRPVDDS------------DLEAIFKQAKEAQEKADSEFEEADRA 227

Query: 646  E---GILKNEEI----NSDAIETVVNAVGNXXXXXXXXXXXXXXXXXXXTGADDKLLXXX 488
            E    IL ++E+    NSD IETV  +                        A  K L   
Sbjct: 228  EEEASILASQELLALSNSDVIETVAESKPKRAPRKATLATETK--------AKKKKLAAG 279

Query: 487  XXXXXXXXXXSEFKGSLKKLDPASGKATVGFTLFGKESFVDLDMNQIVAE 338
                      +EF G+LKKL+  + KATVGFTLFGKE+ V++D+N++V E
Sbjct: 280  STVRVLSGTFAEFVGNLKKLNRKTAKATVGFTLFGKETLVEIDINELVPE 329


>ref|NP_566346.1| plastid transcriptionally active 13 [Arabidopsis thaliana]
            gi|15146210|gb|AAK83588.1| AT3g09210/F3L24_8 [Arabidopsis
            thaliana] gi|22136582|gb|AAM91077.1| AT3g09210/F3L24_8
            [Arabidopsis thaliana] gi|332641217|gb|AEE74738.1|
            plastid transcriptionally active 13 [Arabidopsis
            thaliana]
          Length = 333

 Score =  249 bits (635), Expect = 2e-63
 Identities = 142/290 (48%), Positives = 172/290 (59%), Gaps = 7/290 (2%)
 Frame = -1

Query: 1186 YNWXXXXXXXXXXKPTKRFANWKDELNLDNLADLGTQWWCVRVSRVNGHETADRLARFLA 1007
            Y+W          KP KR+A W +ELNLD LA+ G QWW VRVSR+ GHETA  LAR LA
Sbjct: 61   YSWREEVEEKLIKKPKKRYATWTEELNLDTLAESGPQWWAVRVSRLRGHETAQILARALA 120

Query: 1006 RNHPIVEFKVYAPAVHVKRKLKNGTISVKPKPVFPGCIFLSCVLNKELHDIIRECDGIGG 827
            R  P +EF VYAP+V VKRKLKNG+ISVKPKPVFPGCIF+ C+LNKE+HD IR+ DG+GG
Sbjct: 121  RQFPEMEFTVYAPSVQVKRKLKNGSISVKPKPVFPGCIFIRCILNKEIHDSIRDVDGVGG 180

Query: 826  FIGSKVGNTXXXXXXXXXXXXXXXXXXXXXXXXXDIEAIFHQAKEEQEKADQAFDEEQRS 647
            FIGSKVGNT                         D+EAIF QAKE QEKAD  F+E  R+
Sbjct: 181  FIGSKVGNTKRQINKPRPVDDS------------DLEAIFKQAKEAQEKADSEFEEADRA 228

Query: 646  E---GILKNEEI----NSDAIETVVNAVGNXXXXXXXXXXXXXXXXXXXTGADDKLLXXX 488
            E    IL ++E+    NSD IETV  +                        A  K L   
Sbjct: 229  EEEASILASQELLALSNSDVIETVAESKPKRAPRKATLATETK--------AKKKKLAAG 280

Query: 487  XXXXXXXXXXSEFKGSLKKLDPASGKATVGFTLFGKESFVDLDMNQIVAE 338
                      +EF G+LKKL+  + KATVGFTLFGKE+ V++D+N++V E
Sbjct: 281  STVRVLSGTFAEFVGNLKKLNRKTAKATVGFTLFGKETLVEIDINELVPE 330


>gb|AAM65289.1| unknown [Arabidopsis thaliana]
          Length = 333

 Score =  245 bits (626), Expect = 2e-62
 Identities = 141/290 (48%), Positives = 171/290 (58%), Gaps = 7/290 (2%)
 Frame = -1

Query: 1186 YNWXXXXXXXXXXKPTKRFANWKDELNLDNLADLGTQWWCVRVSRVNGHETADRLARFLA 1007
            Y+W          KP KR+A W +ELNLD LA+ G QWW VRVSR+ GHETA  LAR LA
Sbjct: 61   YSWREEVEEKLIKKPKKRYATWTEELNLDTLAESGPQWWAVRVSRLRGHETAQILARALA 120

Query: 1006 RNHPIVEFKVYAPAVHVKRKLKNGTISVKPKPVFPGCIFLSCVLNKELHDIIRECDGIGG 827
            R  P +EF VYAP+V VKRKLKNG+ISVKPKPVFPGCIF+ C+LNKE+HD IR+ DG+GG
Sbjct: 121  RQFPEMEFTVYAPSVQVKRKLKNGSISVKPKPVFPGCIFIRCILNKEIHDSIRDVDGVGG 180

Query: 826  FIGSKVGNTXXXXXXXXXXXXXXXXXXXXXXXXXDIEAIFHQAKEEQEKADQAFDEEQRS 647
            FI SKVGNT                         D+EAIF QAKE QEKAD  F+E  R+
Sbjct: 181  FIVSKVGNTKRQINKPRPVDDS------------DLEAIFKQAKEAQEKADSEFEEADRA 228

Query: 646  E---GILKNEEI----NSDAIETVVNAVGNXXXXXXXXXXXXXXXXXXXTGADDKLLXXX 488
            E    IL ++E+    NSD IETV  +                        A  K L   
Sbjct: 229  EEEASILASQELLALSNSDVIETVAESKPKRAPRKATLATETK--------AKKKKLAAG 280

Query: 487  XXXXXXXXXXSEFKGSLKKLDPASGKATVGFTLFGKESFVDLDMNQIVAE 338
                      +EF G+LKKL+  + KATVGFTLFGKE+ V++D+N++V E
Sbjct: 281  STVRVLSGTFAEFVGNLKKLNRKTAKATVGFTLFGKETLVEIDINELVPE 330