BLASTX nr result

ID: Coptis25_contig00009600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009600
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276236.2| PREDICTED: ABC transporter C family member 8...   118   9e-25
ref|XP_002276193.2| PREDICTED: ABC transporter C family member 8...   118   9e-25
ref|XP_003638619.1| Multidrug resistance protein ABC transporter...   118   9e-25
emb|CBI35972.3| unnamed protein product [Vitis vinifera]              118   9e-25
emb|CBI35971.3| unnamed protein product [Vitis vinifera]              118   9e-25

>ref|XP_002276236.2| PREDICTED: ABC transporter C family member 8-like [Vitis vinifera]
          Length = 1465

 Score =  118 bits (295), Expect = 9e-25
 Identities = 59/64 (92%), Positives = 64/64 (100%)
 Frame = +3

Query: 3    LGRVLLKRNKILVLDEATASIDSATDAILQKVIRKEFSNCTVITVAHRVPTVIDSDMVMV 182
            LGRVLLKRN+ILVLDEATASIDSATDAILQ++IR+EFSNCTVITVAHRVPT+IDSDMVMV
Sbjct: 1358 LGRVLLKRNRILVLDEATASIDSATDAILQRIIRQEFSNCTVITVAHRVPTLIDSDMVMV 1417

Query: 183  LSYG 194
            LSYG
Sbjct: 1418 LSYG 1421


>ref|XP_002276193.2| PREDICTED: ABC transporter C family member 8-like [Vitis vinifera]
          Length = 1462

 Score =  118 bits (295), Expect = 9e-25
 Identities = 59/64 (92%), Positives = 64/64 (100%)
 Frame = +3

Query: 3    LGRVLLKRNKILVLDEATASIDSATDAILQKVIRKEFSNCTVITVAHRVPTVIDSDMVMV 182
            LGRVLLKRN+ILVLDEATASIDSATDAILQ++IR+EFSNCTVITVAHRVPTV+DSDMVMV
Sbjct: 1366 LGRVLLKRNRILVLDEATASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVMDSDMVMV 1425

Query: 183  LSYG 194
            LSYG
Sbjct: 1426 LSYG 1429


>ref|XP_003638619.1| Multidrug resistance protein ABC transporter family [Medicago
            truncatula] gi|355504554|gb|AES85757.1| Multidrug
            resistance protein ABC transporter family [Medicago
            truncatula]
          Length = 912

 Score =  118 bits (295), Expect = 9e-25
 Identities = 60/64 (93%), Positives = 63/64 (98%)
 Frame = +3

Query: 3    LGRVLLKRNKILVLDEATASIDSATDAILQKVIRKEFSNCTVITVAHRVPTVIDSDMVMV 182
            LGRVLLKRNKILVLDEATASIDSATDAILQK+IR+EF+ CTVITVAHRVPTVIDSDMVMV
Sbjct: 814  LGRVLLKRNKILVLDEATASIDSATDAILQKIIRQEFAECTVITVAHRVPTVIDSDMVMV 873

Query: 183  LSYG 194
            LSYG
Sbjct: 874  LSYG 877


>emb|CBI35972.3| unnamed protein product [Vitis vinifera]
          Length = 1094

 Score =  118 bits (295), Expect = 9e-25
 Identities = 59/64 (92%), Positives = 64/64 (100%)
 Frame = +3

Query: 3    LGRVLLKRNKILVLDEATASIDSATDAILQKVIRKEFSNCTVITVAHRVPTVIDSDMVMV 182
            LGRVLLKRN+ILVLDEATASIDSATDAILQ++IR+EFSNCTVITVAHRVPT+IDSDMVMV
Sbjct: 987  LGRVLLKRNRILVLDEATASIDSATDAILQRIIRQEFSNCTVITVAHRVPTLIDSDMVMV 1046

Query: 183  LSYG 194
            LSYG
Sbjct: 1047 LSYG 1050


>emb|CBI35971.3| unnamed protein product [Vitis vinifera]
          Length = 2772

 Score =  118 bits (295), Expect = 9e-25
 Identities = 59/64 (92%), Positives = 64/64 (100%)
 Frame = +3

Query: 3    LGRVLLKRNKILVLDEATASIDSATDAILQKVIRKEFSNCTVITVAHRVPTVIDSDMVMV 182
            LGRVLLKRN+ILVLDEATASIDSATDAILQ++IR+EFSNCTVITVAHRVPTV+DSDMVMV
Sbjct: 1294 LGRVLLKRNRILVLDEATASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVMDSDMVMV 1353

Query: 183  LSYG 194
            LSYG
Sbjct: 1354 LSYG 1357



 Score =  115 bits (289), Expect = 5e-24
 Identities = 58/64 (90%), Positives = 63/64 (98%)
 Frame = +3

Query: 3    LGRVLLKRNKILVLDEATASIDSATDAILQKVIRKEFSNCTVITVAHRVPTVIDSDMVMV 182
            LGRVLLKRN+ILVLDEATASID+ATDAILQ++IR+EF NCTVITVAHRVPTVIDSDMVMV
Sbjct: 2668 LGRVLLKRNRILVLDEATASIDAATDAILQRIIRQEFLNCTVITVAHRVPTVIDSDMVMV 2727

Query: 183  LSYG 194
            LSYG
Sbjct: 2728 LSYG 2731


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