BLASTX nr result
ID: Coptis25_contig00009599
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00009599
(1759 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera] 171 4e-40
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ... 133 1e-28
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ... 131 7e-28
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] 129 3e-27
emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera] 127 7e-27
>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
Length = 1290
Score = 171 bits (434), Expect = 4e-40
Identities = 120/392 (30%), Positives = 189/392 (48%), Gaps = 24/392 (6%)
Frame = +3
Query: 6 LVNWLDLPDNILFVIANKLTNIKDYISFGGVCRSWNSVYNENLRWYCPPPQIPFLMFNTG 185
+ +W +PD+ L +IA KL +++DY+ FGGVC+SW S++ E+ CP + P+LM
Sbjct: 919 MADWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIF-EDKECCCPSSKSPWLMLA-- 975
Query: 186 DADDYENHQTRSFYSPCERRVCNFRAALPDSMVCRGSSHGWLVIVNKDCTDIRLFNPFFS 365
+ EN + R FYSP +V R C GS +GWLV + D D+ L NP
Sbjct: 976 ---EKENSEIRGFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDL-DMCLLNPLTR 1031
Query: 366 VNNQIQLPPLPLIHN-----EDEIRG----EFYIIRAVLSANPSSNPNYVVMVQYGTKG- 515
V QI LP L N + +G + +I +AVLS+ PSS P+ VM+ Y G
Sbjct: 1032 V--QILLPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAPSS-PDCAVMIIYSDYGR 1088
Query: 516 LAFFKPGSETWSVLDLDDNYFSDVIYYNDQLYAVTWNGQLFSCDVNHPRPYLFHVAQSPS 695
LAF KPG +TW++L+ + D+IY+N AV + +++ CD++ + A +P+
Sbjct: 1089 LAFTKPGHQTWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDISGSQLKTIRFAAAPA 1148
Query: 696 ----GSFEMKFVYLLVSSGELLLIKKRLYVKCSTYL----TARIEIFKLDLIGSKWVELK 851
E + YL+ S GE+ ++ + LY + T + KLD+ +W E++
Sbjct: 1149 LQDVDEIEYEAKYLVESGGEIYMVTRNLYDTARRDIPYMRTWTFSVLKLDMCNKRWEEVE 1208
Query: 852 KFCGQALFLXXXXXXXXXXXYFPGCKLNCIYFTHESLECDPSGDLTDFCTNFKGDQLYDM 1031
+ FL +P + N IYFT D+C + +DM
Sbjct: 1209 NLDHCSFFLGNNHSFSTWASDYPEFRKNSIYFT------------DDYCGFLNIPRNFDM 1256
Query: 1032 EDWNIKG----HYPFKYE--MKFPNPIWIEPT 1109
+N + HYP ++ F P+WI P+
Sbjct: 1257 GIYNFQNTQIEHYPVGHDALSMFSAPLWIRPS 1288
>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 398
Score = 133 bits (335), Expect = 1e-28
Identities = 109/410 (26%), Positives = 185/410 (45%), Gaps = 43/410 (10%)
Frame = +3
Query: 6 LVNWLDLPDNILFVIANKLTNIKDYISFGGVCRSWNSVYNENLRWYCPPPQIPFLMFNTG 185
+++W LP ++ +I+ LT DY+ VC +W + PPQ+P+LM
Sbjct: 2 IMDWSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHL--PPQLPWLMLPQS 59
Query: 186 DADDYENHQTRSFYSPCERRVCNFRAALPDSMVCR---GSSHGWLVIVNKDCTDIRLFNP 356
+ N R+F+S + LP+ + GSSHGWL+I++ D I L NP
Sbjct: 60 QSQS--NQSRRAFFSLSTNKFHFLN--LPEVSYRKRHCGSSHGWLMILD-DTPTILLINP 114
Query: 357 FFSVNNQIQLPPLP-----LIHNEDEIRGEF--------------------YIIRAVLSA 461
++ LPPL + N +I E+ +I + VLS+
Sbjct: 115 L--TRAKLSLPPLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSS 172
Query: 462 NPSSNPNYVVM-VQYGTKGLAFFKPGSETWSVLDLDDNYFSDVIYYNDQLYAVTWNGQLF 638
+P + N+VV+ + T LA+ + G ++WS+++ ++ DVI+ N YAV GQ+
Sbjct: 173 SPLKDNNFVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIV 232
Query: 639 SCDVNHPRPYLFHVAQSPSGSFEMKFVYLLVSSGELLLIKKRLYVKCS----------TY 788
CD++ P + + +M+ YL+ S ELLL+ + L ++ Y
Sbjct: 233 ICDISSDSPRVSFMETPRQAGGDMQ--YLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIY 290
Query: 789 LTARIEIFKLDLIGSKWVELKKFCGQALFLXXXXXXXXXXXYFPGCKLNCIYFTHESLEC 968
T R E+F+LD G +W+ + +ALF+ F GC NCIY+T + L+
Sbjct: 291 RTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDA 350
Query: 969 DPSGDLTDFCTNFKGDQLYDMEDWNIK--GHYP--FKYEMKFPNPIWIEP 1106
+ G D ++ + D I+ YP F +++ P+W+ P
Sbjct: 351 NYDGHFGDHDLG-----IFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSP 395
>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
Length = 389
Score = 131 bits (329), Expect = 7e-28
Identities = 110/409 (26%), Positives = 184/409 (44%), Gaps = 42/409 (10%)
Frame = +3
Query: 6 LVNWLDLPDNILFVIANKLTNIKDYISFGGVCRSWNSVYNENLRWYCPPPQIPFLMFNTG 185
+ +W L +L IA K DY+ F VC +W + + P Q+P+LM
Sbjct: 1 MADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHL--PTQLPWLML--- 55
Query: 186 DADDYENHQTRSFYSPCERRVCNFRAALPDSMVCR---GSSHGWLVIVNKDCTDIRLFNP 356
+H R F+S + + LP++ R GSSHGWL+I++ + +I L NP
Sbjct: 56 -PQSQPHHTHRPFFSLSLNKFHFLQ--LPEASHRRRRRGSSHGWLLILD-EAPEIFLLNP 111
Query: 357 FFSVNNQIQLPPLPLIHN-----------EDEIR---GEFY-----------IIRAVLSA 461
+++ LPPL N E +R G+ Y I + +LS+
Sbjct: 112 L--TRSKVHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSS 169
Query: 462 NPSSNPNYVVMVQYGTKG-LAFFKPGSETWSVLDLDDNYFSDVIYYNDQLYAVTWNGQLF 638
+P++ +++ +V G LA + ++W+ L+ +Y DVI++ YAV G +
Sbjct: 170 SPANGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIA 229
Query: 639 SCDVN--HPRPYLFHVAQSPSGSFEMKFVYLLVSSGELLLIKKRLYVKCST--------Y 788
CDV+ PR + + Q G + YL+ S ELLL+ + L + Y
Sbjct: 230 VCDVSGSSPRVSIIEMPQQFGGDLQ----YLVESGEELLLVTRYLDLTYDVEPDQTSLIY 285
Query: 789 LTARIEIFKLDLIGSKWVELKKFCGQALFLXXXXXXXXXXXYFPGCKLNCIYFTHESLEC 968
T R ++ +LDL +W + +ALFL FPGCK NCIY+T + E
Sbjct: 286 RTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSED 345
Query: 969 DPSGDLTDFCTNFKGDQ---LYDMEDWNIKGHYPFKYEMKFPNPIWIEP 1106
+ G G+Q ++++ED +I+ + +++P P+W+ P
Sbjct: 346 NYDG--------IGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTP 386
>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
Length = 389
Score = 129 bits (323), Expect = 3e-27
Identities = 109/409 (26%), Positives = 183/409 (44%), Gaps = 42/409 (10%)
Frame = +3
Query: 6 LVNWLDLPDNILFVIANKLTNIKDYISFGGVCRSWNSVYNENLRWYCPPPQIPFLMFNTG 185
+ +W L +L IA K DY+ F VC +W + + P Q+P+LM
Sbjct: 1 MADWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHL--PTQLPWLML--- 55
Query: 186 DADDYENHQTRSFYSPCERRVCNFRAALPDSMVCR---GSSHGWLVIVNKDCTDIRLFNP 356
+H R F+S + + LP++ R GSSHGWL+I++ + +I L NP
Sbjct: 56 -PQSQPHHTHRPFFSLSLNKFHFLQ--LPEASHRRRRRGSSHGWLLILD-EAPEIFLLNP 111
Query: 357 FFSVNNQIQLPPLPLIHN-----------EDEIR---GEFY-----------IIRAVLSA 461
+++ LPPL N E +R G+ Y I + +LS+
Sbjct: 112 L--TRSKVHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSS 169
Query: 462 NPSSNPNYVVMVQYGTKG-LAFFKPGSETWSVLDLDDNYFSDVIYYNDQLYAVTWNGQLF 638
+P++ +++ +V G LA + ++W+ L+ +Y DVI++ YAV G +
Sbjct: 170 SPANGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIA 229
Query: 639 SCDVN--HPRPYLFHVAQSPSGSFEMKFVYLLVSSGELLLIKKRLYVKCST--------Y 788
CDV+ PR + + Q G + YL+ S ELLL+ + L + Y
Sbjct: 230 VCDVSGSSPRVSIIEMPQQFGGDLQ----YLVESGEELLLVTRYLDLTYDVEXDQTSLIY 285
Query: 789 LTARIEIFKLDLIGSKWVELKKFCGQALFLXXXXXXXXXXXYFPGCKLNCIYFTHESLEC 968
T R ++ +LD +W + +ALFL FPGCK NCIY+T + E
Sbjct: 286 RTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSED 345
Query: 969 DPSGDLTDFCTNFKGDQ---LYDMEDWNIKGHYPFKYEMKFPNPIWIEP 1106
+ G G+Q ++++ED +I+ + +++P P+W+ P
Sbjct: 346 NYDG--------IGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTP 386
>emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]
Length = 530
Score = 127 bits (320), Expect = 7e-27
Identities = 116/371 (31%), Positives = 173/371 (46%), Gaps = 35/371 (9%)
Frame = +3
Query: 3 ELVNWLDLPDNILFVIANKLTNIKDYISFGGVCRSWNSVYNE-------NLRWYCPPPQI 161
E W LPD++L I N L +I D I FG VC W+S+ + N R + PP +
Sbjct: 129 EYSGWAWLPDDLLEPILNNLASIVDSIRFGAVCTPWHSLAVKSFQRLPVNQRPHLQPPPL 188
Query: 162 PFLMFNTGDADDYENHQTRSFYSPCERRVCNFRAALPDSMVCRGSSHGWLVIVNKDCTDI 341
P+LM + +RSFYS +++ F +P GSSHGWL I + +
Sbjct: 189 PWLMV----LSKPNSKDSRSFYSITHQKLSKFHLPVPPGTRYCGSSHGWL-ITTDETNAV 243
Query: 342 RLFNPFFSVNNQIQLPPLPLIH-NEDEIRG-EFYIIRAVLSANPSSNP-NYVVMVQYG-T 509
L +PF I+LPPL + + + G E+++ + VLSANP+SNP ++V+MV YG
Sbjct: 244 SLLHPF--SRQVIRLPPLTRLKIPQRTVYGFEYHLHKGVLSANPTSNPDDFVLMVIYGHD 301
Query: 510 KGLAFFKPGSETWSVLD--------LDDNY--------FSDVIYYNDQL--YAVTWNGQL 635
KGLAF K G + W+ +D LD Y F DVIY +L YA++++ Q+
Sbjct: 302 KGLAFIKSGDQNWAYIDSMVMKDDVLDSPYFLDLSLFGFEDVIYQERELQFYALSYDSQV 361
Query: 636 FSCDVNHPRPYLFHVAQSPSGSFEMKFVYLLVSSGE---LLLIKK-RLYVKCSTYLTARI 803
+ + + V + F F LV S E L I+K Y K S + ++
Sbjct: 362 LAIKTS-GIGNMVKVVPPYNFGFVPAFKLYLVESPEGRDLWQIEKVSFYDKSSGF---KV 417
Query: 804 EIFKLDLIGSKWVELKKFCGQALFLXXXXXXXXXXXYFPGCKLNCIYF--THESLECDPS 977
+ +WVE+ ALFL F GC+ +CIY T ++LE +
Sbjct: 418 FVMVDRETKPEWVEVNSLGDVALFLGDNDSIAVTASRFSGCRPSCIYVASTDDTLEMNME 477
Query: 978 GDLTDFCTNFK 1010
+ F +K
Sbjct: 478 DERESFRYRYK 488